Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0227
         (761 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    27   0.48 
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    27   0.48 
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    25   2.5  
AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    24   4.5  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   4.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   5.9  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   7.8  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 27.5 bits (58), Expect = 0.48
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = +2

Query: 176 PLLHVPRISSRILLKSNPLSSPKDKKTASVPNSFTKMSRSNSLLYGAASALRFLSNESIS 355
           P+     +   I  KS  L   +   +A    SF KMS  NSL     + LR ++ +S S
Sbjct: 328 PVCDFGELMPAIRSKSGDLLRKEPSFSAEWAKSFNKMSHFNSLKQWGMNRLRMMNRDSSS 387


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 27.5 bits (58), Expect = 0.48
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = +2

Query: 176 PLLHVPRISSRILLKSNPLSSPKDKKTASVPNSFTKMSRSNSLLYGAASALRFLSNESIS 355
           P+     +   I  KS  L   +   +A    SF KMS  NSL     + LR ++ +S S
Sbjct: 329 PVCDFGELMPAIRSKSGDLLRKEPSFSAEWAKSFNKMSHFNSLKQWGMNRLRMMNRDSSS 388


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = -3

Query: 678 YREMSYNIDALG---AGGSVDEPVIYSQDSY 595
           +RE SYN+ A+G   A GS D  +    D Y
Sbjct: 685 HRESSYNVSAIGRLNADGSEDHGLFQISDIY 715


>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 617 TGSSTLPPAPRASMLYDISR*KGVPFC 697
           +GSS+  P P    L   S  K VPFC
Sbjct: 137 SGSSSSSPEPNLDCLSKCSPTKCVPFC 163


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 111  LAYPTSTGLPLHLNL 67
            +A+P +TGLP H +L
Sbjct: 1087 MAFPLATGLPFHYSL 1101


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 477 PKSFLRTESPQAIYDSLVKRFEE 409
           PK     ESP +IY  ++K  +E
Sbjct: 225 PKKMENIESPPSIYSGIIKHDDE 247


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
            topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = -3

Query: 690  GTPFYREMSYNIDALGAGGSVDE-PVIYSQDS 598
            G P    +SY +   GA GSV   PV  S DS
Sbjct: 1007 GPPSATAISYGLTMAGAAGSVSNGPVPASLDS 1038


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,859
Number of Sequences: 2352
Number of extensions: 14652
Number of successful extensions: 36
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)