Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0227
(761 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ... 163 2e-40
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA... 163 2e-40
AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-P... 52 1e-06
AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-P... 52 1e-06
AY061506-1|AAL29054.1| 197|Drosophila melanogaster LD46305p pro... 34 0.24
AE014298-2515|AAN09431.1| 151|Drosophila melanogaster CG4949-PB... 34 0.24
AE014298-2514|AAF48691.1| 197|Drosophila melanogaster CG4949-PA... 34 0.24
AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-P... 31 2.3
AY061509-1|AAL29057.1| 177|Drosophila melanogaster LD46404p pro... 30 4.0
AE014296-543|AAF47708.1| 177|Drosophila melanogaster CG16753-PA... 30 4.0
AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-P... 30 4.0
AE014134-630|AAF51090.1| 807|Drosophila melanogaster CG15415-PA... 29 6.9
>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
acid-bindingglycoprotein protein.
Length = 3351
Score = 163 bits (397), Expect = 2e-40
Identities = 90/229 (39%), Positives = 128/229 (55%), Gaps = 4/229 (1%)
Frame = -3
Query: 681 FYREMSYNIDALGAGGSVDEPVIYSQDSYLPRSVNFNLTVSLFGHDFNVLEFGGRQGNLD 502
F E+SY +++LG G S D +IYSQ +LPRS N+T FG ++NV E RQ N++
Sbjct: 608 FNNEVSYKLESLGVGASTDYQIIYSQHGFLPRSSRINVTTEFFGTNYNVFEASVRQENVE 667
Query: 501 RVLEHFLGPKSFLRTESPQAIYDSLVKRFEEAKKKVEDGLTRGRRSVKTEIDSFDKNLKA 322
VLE++LGPK + + +D +VK E V G R RRS+ ++ K K
Sbjct: 668 DVLEYYLGPKGLVNKD-----FDEIVKLIEVGNNGVAAG-GRARRSIVDDVSKISKKYKM 721
Query: 321 EAAPYNNELDLDIFVKLFGTDAVFLSFGDDKGFDFNKILDDILGTCSSGISKLKH----F 154
+L+LD+ +KLFG++ FLS GD+ LDDI+ S+ K K F
Sbjct: 722 YGVKNVQDLNLDVSLKLFGSELAFLSLGDN----IPSSLDDIINYFSTSFEKAKQELSSF 777
Query: 153 QTDFRTHLLFLDAELAYPTSTGLPLHLNLVGSATAKLDLATNIDVRQII 7
+ F +H LFLD +LAYPTS G+PL L G A K+DLA ++D+ I+
Sbjct: 778 EKQFSSHHLFLDTDLAYPTSIGVPLELVAQGFAATKVDLAVSLDINAIL 826
>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
protein.
Length = 3351
Score = 163 bits (397), Expect = 2e-40
Identities = 90/229 (39%), Positives = 128/229 (55%), Gaps = 4/229 (1%)
Frame = -3
Query: 681 FYREMSYNIDALGAGGSVDEPVIYSQDSYLPRSVNFNLTVSLFGHDFNVLEFGGRQGNLD 502
F E+SY +++LG G S D +IYSQ +LPRS N+T FG ++NV E RQ N++
Sbjct: 608 FNNEVSYKLESLGVGASTDYQIIYSQHGFLPRSSRINVTTEFFGTNYNVFEASVRQENVE 667
Query: 501 RVLEHFLGPKSFLRTESPQAIYDSLVKRFEEAKKKVEDGLTRGRRSVKTEIDSFDKNLKA 322
VLE++LGPK + + +D +VK E V G R RRS+ ++ K K
Sbjct: 668 DVLEYYLGPKGLVNKD-----FDEIVKLIEVGNNGVAAG-GRARRSIVDDVSKISKKYKM 721
Query: 321 EAAPYNNELDLDIFVKLFGTDAVFLSFGDDKGFDFNKILDDILGTCSSGISKLKH----F 154
+L+LD+ +KLFG++ FLS GD+ LDDI+ S+ K K F
Sbjct: 722 YGVKNVQDLNLDVSLKLFGSELAFLSLGDN----IPSSLDDIINYFSTSFEKAKQELSSF 777
Query: 153 QTDFRTHLLFLDAELAYPTSTGLPLHLNLVGSATAKLDLATNIDVRQII 7
+ F +H LFLD +LAYPTS G+PL L G A K+DLA ++D+ I+
Sbjct: 778 EKQFSSHHLFLDTDLAYPTSIGVPLELVAQGFAATKVDLAVSLDINAIL 826
>AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-PA,
isoform A protein.
Length = 4345
Score = 51.6 bits (118), Expect = 1e-06
Identities = 26/67 (38%), Positives = 32/67 (47%)
Frame = -3
Query: 672 EMSYNIDALGAGGSVDEPVIYSQDSYLPRSVNFNLTVSLFGHDFNVLEFGGRQGNLDRVL 493
E S D G + D VI+ DSYLPR + N T LFG N EF R L+ +
Sbjct: 683 EHSLFFDEYNFGTTTDANVIFGTDSYLPRIASVNFTADLFGQSVNFFEFTARAEGLEELA 742
Query: 492 EHFLGPK 472
+ GPK
Sbjct: 743 ANAFGPK 749
Score = 33.1 bits (72), Expect = 0.43
Identities = 30/131 (22%), Positives = 56/131 (42%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELDLDIFVKLFGTDAVFLSFGD 235
E K++ D T ++ + +DS LK + YNN +++FG D L + +
Sbjct: 816 EGNKRQKRDVSTTRKQEIDRNVDSLGYKLKYD---YNNPR-AQFGLRVFGND---LRYFN 868
Query: 234 DKGFDFNKILDDILGTCSSGISKLKHFQTDFRTHLLFLDAELAYPTSTGLPLHLNLVGSA 55
+ L + L + + +FLDA P + GLPL ++ G++
Sbjct: 869 VESLVEVMALAAKFNPFQQAKNVLSGKEFTYTKSRVFLDASYTVPLAVGLPLAIHAFGAS 928
Query: 54 TAKLDLATNID 22
+ L ++ N+D
Sbjct: 929 SIDLRVSGNLD 939
>AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-PB,
isoform B protein.
Length = 4374
Score = 51.6 bits (118), Expect = 1e-06
Identities = 26/67 (38%), Positives = 32/67 (47%)
Frame = -3
Query: 672 EMSYNIDALGAGGSVDEPVIYSQDSYLPRSVNFNLTVSLFGHDFNVLEFGGRQGNLDRVL 493
E S D G + D VI+ DSYLPR + N T LFG N EF R L+ +
Sbjct: 712 EHSLFFDEYNFGTTTDANVIFGTDSYLPRIASVNFTADLFGQSVNFFEFTARAEGLEELA 771
Query: 492 EHFLGPK 472
+ GPK
Sbjct: 772 ANAFGPK 778
Score = 33.1 bits (72), Expect = 0.43
Identities = 30/131 (22%), Positives = 56/131 (42%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELDLDIFVKLFGTDAVFLSFGD 235
E K++ D T ++ + +DS LK + YNN +++FG D L + +
Sbjct: 845 EGNKRQKRDVSTTRKQEIDRNVDSLGYKLKYD---YNNPR-AQFGLRVFGND---LRYFN 897
Query: 234 DKGFDFNKILDDILGTCSSGISKLKHFQTDFRTHLLFLDAELAYPTSTGLPLHLNLVGSA 55
+ L + L + + +FLDA P + GLPL ++ G++
Sbjct: 898 VESLVEVMALAAKFNPFQQAKNVLSGKEFTYTKSRVFLDASYTVPLAVGLPLAIHAFGAS 957
Query: 54 TAKLDLATNID 22
+ L ++ N+D
Sbjct: 958 SIDLRVSGNLD 968
>AY061506-1|AAL29054.1| 197|Drosophila melanogaster LD46305p
protein.
Length = 197
Score = 33.9 bits (74), Expect = 0.24
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -3
Query: 678 YREMSYNIDALGAGGSVDEPVIYSQDSYLPRSVNFNLTVSLFGH 547
YRE+ N+ AG S+D V+ SQ+ Y + F L + L+ H
Sbjct: 132 YREILANLAEQKAGKSIDTIVVMSQEPYPMSAAQFKLLIGLYFH 175
>AE014298-2515|AAN09431.1| 151|Drosophila melanogaster CG4949-PB,
isoform B protein.
Length = 151
Score = 33.9 bits (74), Expect = 0.24
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -3
Query: 678 YREMSYNIDALGAGGSVDEPVIYSQDSYLPRSVNFNLTVSLFGH 547
YRE+ N+ AG S+D V+ SQ+ Y + F L + L+ H
Sbjct: 86 YREILANLAEQKAGKSIDTIVVMSQEPYPMSAAQFKLLIGLYFH 129
>AE014298-2514|AAF48691.1| 197|Drosophila melanogaster CG4949-PA,
isoform A protein.
Length = 197
Score = 33.9 bits (74), Expect = 0.24
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -3
Query: 678 YREMSYNIDALGAGGSVDEPVIYSQDSYLPRSVNFNLTVSLFGH 547
YRE+ N+ AG S+D V+ SQ+ Y + F L + L+ H
Sbjct: 132 YREILANLAEQKAGKSIDTIVVMSQEPYPMSAAQFKLLIGLYFH 175
>AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-PA,
isoform A protein.
Length = 2594
Score = 30.7 bits (66), Expect = 2.3
Identities = 25/93 (26%), Positives = 38/93 (40%)
Frame = +2
Query: 338 SNESISVLTDLRPLVSPSSTFFLASSNLLTRLS*IA*GLSVRRKLLGPKKCSRTRSKLPW 517
+N S T+ +P+ P++ S + LS S P S+T S +P
Sbjct: 733 NNIKASSKTETKPVQKPTTKSQQPSQKSVAALSKTTHTNSTSSSKASPAVNSKTTSSIPI 792
Query: 518 RPPNSKTLKS*PNNETVKLKLTDLGRYESWEYI 616
+ P+ TLK+ NE+ L ES E I
Sbjct: 793 KTPSKSTLKTSSENESDNSLAKSLLHKESVENI 825
>AY061509-1|AAL29057.1| 177|Drosophila melanogaster LD46404p
protein.
Length = 177
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -3
Query: 504 DRVLEHFLGPK-SFLRTESPQAIYDSLVKRFEEAKKK 397
DR+L L PK + + E +A + L+KRF EA+KK
Sbjct: 33 DRLLHKTLTPKKTTTKKEKSEAKHKKLLKRFAEARKK 69
>AE014296-543|AAF47708.1| 177|Drosophila melanogaster CG16753-PA
protein.
Length = 177
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -3
Query: 504 DRVLEHFLGPK-SFLRTESPQAIYDSLVKRFEEAKKK 397
DR+L L PK + + E +A + L+KRF EA+KK
Sbjct: 33 DRLLHKTLTPKKTTTKKEKSEAKHKKLLKRFAEARKK 69
>AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-PB,
isoform B protein.
Length = 2922
Score = 29.9 bits (64), Expect = 4.0
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +2
Query: 338 SNESISVLTDLRPLVSPSSTFFLASSNLLTRLS*IA*GLSVRRKLLGPKKCSRTRSKLPW 517
+N S T+ +P+ P++ S + LS S P S+T S +P
Sbjct: 786 NNIKASSKTETKPVQKPTTKSQQPSQKSVAALSKTTHTNSTSSSKASPAVNSKTTSSIPI 845
Query: 518 RPPNSKTLKS*PNNET 565
+ P+ TLK+ NE+
Sbjct: 846 KTPSKSTLKTSSENES 861
>AE014134-630|AAF51090.1| 807|Drosophila melanogaster CG15415-PA
protein.
Length = 807
Score = 29.1 bits (62), Expect = 6.9
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = -3
Query: 426 VKRFEEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELDLDIFVKL 271
+K ++ ++ D RS+K ++ + +KNL ++A +N+L D F +L
Sbjct: 90 LKEEQDVLQQDYDAKVEETRSLKDKLTAAEKNLAEKSASRSNQLHDDFFARL 141
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,132,351
Number of Sequences: 53049
Number of extensions: 677501
Number of successful extensions: 2014
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2012
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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