Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0224
(768 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 34 0.002
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 32 0.007
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 31 0.009
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 31 0.009
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 5.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 5.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 5.5
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 7.2
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 9.5
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 33.9 bits (74), Expect = 0.002
Identities = 21/87 (24%), Positives = 39/87 (44%)
Frame = +2
Query: 116 DANVVEGQNIKITCKLIGKPYSEVTWKYKKDELDNGTDVSAVLGSRVQLEKNEQGLDNTV 295
D +G + ++ CK G P +VTW KK D D + ++L + +++
Sbjct: 687 DKAFAQGSDARVECKADGFPKPQVTW--KKAAGDTPGDY-----TDLKLSNPDISVEDGT 739
Query: 296 LVLQNAERADAGLYQCSPAGGTPADVT 376
L + N ++ + G Y C G A ++
Sbjct: 740 LSINNIQKTNEGYYLCEAVNGIGAGLS 766
Score = 33.9 bits (74), Expect = 0.002
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +2
Query: 137 QNIKITCKLIGKPYSEVTWKYKKDELDNGTDVSAVLGSRVQLEKNEQGLDNTVLVLQNAE 316
+++K+ C +G P EVTWK + AVL S +L + +G L ++ +
Sbjct: 1292 EDVKLPCLAVGVPAPEVTWKVR----------GAVLQSSDRLRQLPEG----SLFIKEVD 1337
Query: 317 RADAGLYQC 343
R DAG Y C
Sbjct: 1338 RTDAGEYSC 1346
Score = 30.7 bits (66), Expect = 0.016
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Frame = +2
Query: 107 MTKDANVVEGQNIKITCKLIGKPYSEVTWKYKKDELDNGTDVSAVLGSRVQLEKNEQGLD 286
M K A +V G+ +++TC + G P + W + T V + + + ++
Sbjct: 497 MDKKA-IVAGETLRVTCPVAGYPIESIVW-------ERDTRV-------LPINRKQKVFP 541
Query: 287 NTVLVLQNAER-ADAGLYQC--SPAGGTPADVTLRVK 388
N L+++N ER +D Y C A G A TL V+
Sbjct: 542 NGTLIIENVERMSDQATYTCVARNAQGYSARGTLEVQ 578
Score = 27.5 bits (58), Expect = 0.15
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 278 GLDNTVLVLQNAERADAGLYQC 343
GL+ VL +++ ++ D G+YQC
Sbjct: 349 GLEEAVLRIESVKKEDKGMYQC 370
Score = 26.2 bits (55), Expect = 0.34
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
Frame = +2
Query: 134 GQNIKITCKLIGKPYSEVTWKYKKDELDNGTDVSAVLGSRVQLEKNEQGLDNTVLVLQNA 313
G ++ + C G P E+TW+ L N + +G V + G + L + +
Sbjct: 408 GPSMFLKCVASGNPTPEITWELDGKRLSNTERLQ--VGQYVTV----NGDVVSHLNISST 461
Query: 314 ERADAGLYQC---SPAGGTPADVTLRVKGV 394
D GLY+C S G L V G+
Sbjct: 462 HTNDGGLYKCIAASKVGSAEHSARLNVYGL 491
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 31.9 bits (69), Expect = 0.007
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 137 QNIKITCKLIGKPYSEVTWKYKKDELDNGTDVSAVLGSRVQLEKNEQGLDNTVLVLQNAE 316
+ I C + G+P V W K DE N Q +K + + T L+++N +
Sbjct: 417 EEANIRCHVAGEPLPRVQW-LKNDEALNHD----------QPDKYDLIGNGTKLIIKNVD 465
Query: 317 RADAGLYQC--SPAGGTPADVT 376
AD G Y C S GG D++
Sbjct: 466 YADTGAYMCQASSIGGITRDIS 487
Score = 24.2 bits (50), Expect = 1.4
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = +2
Query: 134 GQNIKITCKLIGKPYSEVTWKYKKDELD 217
G N++I C + G P + W+ +L+
Sbjct: 325 GDNVEIKCDVTGTPPPPLVWRRNGADLE 352
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 31.5 bits (68), Expect = 0.009
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = +2
Query: 89 GNVHAKMTKDANVVEGQNIKITCKLIGKPYSEVTWKYKKDELDNGTDVSAVLGSRVQLEK 268
G + ++ V G+ +++ C + G P E+ W+ EL + L +V
Sbjct: 518 GLPYIRLIPKVTAVAGETLRLKCPVAGYPIEEIKWERANRELPDD------LRQKVLP-- 569
Query: 269 NEQGLDNTVLVLQNAERADAGLYQCS 346
D T+++ ++ DAG+Y CS
Sbjct: 570 -----DGTLVITSVQKKGDAGVYTCS 590
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +2
Query: 290 TVLVLQNAERADAGLYQCS---PAGGTPADVTLRV 385
+VL L+ D G+Y+CS P G A++ L V
Sbjct: 293 SVLALEAVTLEDNGIYRCSASNPGGEASAEIRLIV 327
Score = 23.4 bits (48), Expect = 2.4
Identities = 13/49 (26%), Positives = 19/49 (38%)
Frame = +2
Query: 230 VSAVLGSRVQLEKNEQGLDNTVLVLQNAERADAGLYQCSPAGGTPADVT 376
+ + +G VQL+ N L ++ D C G TP VT
Sbjct: 792 IGSGIGKVVQLKVNSSPYFAAPSRLVTVKKGDTATLHCEVHGDTPVTVT 840
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 278 GLDNTVLVLQNAERADAGLYQC 343
G + +L L R D G+YQC
Sbjct: 378 GRQSELLRLNGINREDRGMYQC 399
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +2
Query: 224 TDVSAVLGSRVQLEKNEQGLDNTVLVLQNAERADAGLYQ 340
TDVS V L QG+ +V + A + +G Y+
Sbjct: 717 TDVSVERNKHVALHCQAQGVPTPTIVWKKATGSKSGEYE 755
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = +2
Query: 134 GQNIKITCKLIGKPYSEVTW 193
G + + C G P +VTW
Sbjct: 436 GPAVSLKCSAAGNPTPQVTW 455
Score = 22.2 bits (45), Expect = 5.5
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 251 RVQLEKNEQGLDNTVLVLQNAERADAGLYQC 343
R +N Q L + L+L N + D G Y C
Sbjct: 1354 RTDSTRNIQILPSGELMLSNLQSQDGGDYTC 1384
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 31.5 bits (68), Expect = 0.009
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = +2
Query: 89 GNVHAKMTKDANVVEGQNIKITCKLIGKPYSEVTWKYKKDELDNGTDVSAVLGSRVQLEK 268
G + ++ V G+ +++ C + G P E+ W+ EL + L +V
Sbjct: 518 GLPYIRLIPKVTAVAGETLRLKCPVAGYPIEEIKWERANRELPDD------LRQKVLP-- 569
Query: 269 NEQGLDNTVLVLQNAERADAGLYQCS 346
D T+++ ++ DAG+Y CS
Sbjct: 570 -----DGTLVITSVQKKGDAGVYTCS 590
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +2
Query: 290 TVLVLQNAERADAGLYQCS---PAGGTPADVTLRV 385
+VL L+ D G+Y+CS P G A++ L V
Sbjct: 293 SVLALEAVTLEDNGIYRCSASNPGGEASAEIRLIV 327
Score = 23.4 bits (48), Expect = 2.4
Identities = 13/49 (26%), Positives = 19/49 (38%)
Frame = +2
Query: 230 VSAVLGSRVQLEKNEQGLDNTVLVLQNAERADAGLYQCSPAGGTPADVT 376
+ + +G VQL+ N L ++ D C G TP VT
Sbjct: 788 IGSGIGKVVQLKVNSSPYFAAPSRLVTVKKGDTATLHCEVHGDTPVTVT 836
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 278 GLDNTVLVLQNAERADAGLYQC 343
G + +L L R D G+YQC
Sbjct: 378 GRQSELLRLNGINREDRGMYQC 399
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +2
Query: 224 TDVSAVLGSRVQLEKNEQGLDNTVLVLQNAERADAGLYQ 340
TDVS V L QG+ +V + A + +G Y+
Sbjct: 713 TDVSVERNKHVALHCQAQGVPTPTIVWKKATGSKSGEYE 751
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = +2
Query: 134 GQNIKITCKLIGKPYSEVTW 193
G + + C G P +VTW
Sbjct: 436 GPAVSLKCSAAGNPTPQVTW 455
Score = 22.2 bits (45), Expect = 5.5
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 251 RVQLEKNEQGLDNTVLVLQNAERADAGLYQC 343
R +N Q L + L+L N + D G Y C
Sbjct: 1350 RTDSTRNIQILPSGELMLSNLQSQDGGDYTC 1380
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -1
Query: 699 NTFHFRXNYRAYSKNTYS 646
N +++ NY Y+K+ Y+
Sbjct: 90 NNYNYNNNYNNYNKHNYN 107
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -1
Query: 699 NTFHFRXNYRAYSKNTYS 646
N +++ NY Y+K+ Y+
Sbjct: 90 NNYNYNNNYNNYNKHNYN 107
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -1
Query: 699 NTFHFRXNYRAYSKNTYS 646
N +++ NY Y+K+ Y+
Sbjct: 90 NNYNYNNNYNNYNKHNYN 107
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -1
Query: 699 NTFHFRXNYRAYSKNTYS 646
N +++ NY Y+K+ Y+
Sbjct: 90 NNYNYNNNYNNYNKHNYN 107
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -1
Query: 699 NTFHFRXNYRAYSKNTYS 646
N +++ NY Y+K+ Y+
Sbjct: 90 NNYNYNNNYNNYNKHNYN 107
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -1
Query: 699 NTFHFRXNYRAYSKNTYS 646
N +++ NY Y+K+ Y+
Sbjct: 90 NNYNYNNNYNNYNKHNYN 107
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -1
Query: 699 NTFHFRXNYRAYSKNTYS 646
N +++ NY Y+K+ Y+
Sbjct: 90 NNYNYNNNYNNYNKHNYN 107
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -1
Query: 699 NTFHFRXNYRAYSKNTYS 646
N +++ NY Y+K+ Y+
Sbjct: 90 NNYNYNNNYNNYNKHNYN 107
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -1
Query: 699 NTFHFRXNYRAYSKNTYS 646
N +++ NY Y+K+ Y+
Sbjct: 90 NNYNYNNNYNNYNKHNYN 107
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.5
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -1
Query: 699 NTFHFRXNYRAYSKNTYS 646
N +++ NY Y+K+ Y+
Sbjct: 323 NNYNYNNNYNNYNKHNYN 340
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.5
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -1
Query: 699 NTFHFRXNYRAYSKNTYS 646
N +++ NY Y+K+ Y+
Sbjct: 323 NNYNYNNNYNNYNKHNYN 340
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/22 (31%), Positives = 8/22 (36%)
Frame = +3
Query: 294 CWCCRTRSAPTPACTSAARPGA 359
CWCC P + GA
Sbjct: 13 CWCCDNLGGPGSSSAGGVVTGA 34
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = +3
Query: 315 SAPTPA--CTSAARPGARPPTSRSGSRACTT 401
++P+PA C S AR P G C T
Sbjct: 743 ASPSPAEQCASTTTITARSPQGSQGLLQCAT 773
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,370
Number of Sequences: 438
Number of extensions: 2993
Number of successful extensions: 42
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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