Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0223
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   3.2  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   3.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   7.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.8  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 2   LLSLCGFVINLIQKWC 49
           L+  C FV+ L QK+C
Sbjct: 181 LIQFCAFVVVLKQKFC 196


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory
          receptor candidate 25 protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 2  LLSLCGFVINLIQKWC 49
          L+  C FV+ L QK+C
Sbjct: 6  LIQFCAFVVVLKQKFC 21


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
 Frame = -2

Query: 405 NGYKSICSRLWTNTDARKISL*QIPDKCRFTG-----GVLSHEKYHGFGIE-IWIFEL-- 250
           NGY   C+R     D +K  L  +P    FT       +     + G G + +++     
Sbjct: 203 NGYAISCARYRFMPDIKKKGLHSLPRLVLFTSEDAHYSIKKLASFQGIGTDNVYLIRTDA 262

Query: 249 -RRMEIVELVVQLKR 208
             RM++  LV +++R
Sbjct: 263 RGRMDVSHLVEEIER 277


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 154 NIENVVEGLKRIYK 195
           NIE +  GLKR+ K
Sbjct: 244 NIERLCNGLKRVVK 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,149
Number of Sequences: 336
Number of extensions: 3650
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)