Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0223
         (706 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    28   0.25 
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    28   0.25 
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    28   0.25 
AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like precu...    23   7.1  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 283 MILLVGQYSTGKTTFIRYLLERDFPGIRIGP 375
           ++ ++G    GKTT +  L  R  PG++I P
Sbjct: 128 LLAVMGSSGAGKTTLLNALAFRSPPGVKISP 158


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 283 MILLVGQYSTGKTTFIRYLLERDFPGIRIGP 375
           ++ ++G    GKTT +  L  R  PG++I P
Sbjct: 128 LLAVMGSSGAGKTTLLNALAFRSPPGVKISP 158


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 283 MILLVGQYSTGKTTFIRYLLERDFPGIRIGP 375
           ++ ++G    GKTT +  L  R  PG++I P
Sbjct: 106 LLAVMGSSGAGKTTLLNALAFRSPPGVKISP 136


>AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like
           precursor protein.
          Length = 267

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -3

Query: 485 LLNGRNCFFGSTTNALPGITPSFSSNITAINLSVVGSGP 369
           +  GR+ F    + A PG   +    + AIN  + G+ P
Sbjct: 79  VFGGRSMFQDKHSQAGPGTHAAHVVRVCAINAGLTGANP 117


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 724,051
Number of Sequences: 2352
Number of extensions: 14985
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)