Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0221
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    26   0.34 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    25   0.45 
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    25   0.79 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   3.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   5.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.5  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   5.5  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   7.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   7.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.7  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 8/50 (16%)
 Frame = +3

Query: 405 HYCNTNNDVHEYIDKFCKDLCNANDNQE--------VNRINWTDSKSMNK 530
           H    N++V + ++    DL +  DN E        VN   W D+KS NK
Sbjct: 337 HLNPDNDEVLQVLEDIYSDLLDLTDNNELFHLGSDEVNLTCWQDTKSANK 386


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +3

Query: 576 CAKVIPTVAYTHPDYA 623
           C KV  TVA THP YA
Sbjct: 172 CPKVNETVAATHPRYA 187


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +3

Query: 285 IQHVTIMQEVQKTQKTEDIQSVIESISENV 374
           IQH  +M  V++ Q+T+ +     S+ +++
Sbjct: 94  IQHQRVMANVRERQRTQSLNEAFASLRKSI 123


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 344 LYIFSFLCFLYFLH 303
           L+ FSF C L+F++
Sbjct: 10  LFFFSFCCILFFIY 23


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = -3

Query: 568 TGIFMAICIPRLSLFILLESVQLMRLTS*LSLALHRSLQNLSM 440
           T IF+   IP + L IL   +    +++  +L L++ + N+S+
Sbjct: 240 TIIFLFFIIPLIILLILYCIIAKNLMSNAATLVLNKHIDNISL 282


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -2

Query: 398 CSQIIPFKYVF*YALYYRLYIFSFLCFLYFLHDRDVLDTQQVLF 267
           C  II F   F    YY  Y F  L  +Y+ +   ++ T  +LF
Sbjct: 87  CPFII-FTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLF 129


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/37 (27%), Positives = 23/37 (62%)
 Frame = -3

Query: 361 MLSITDCISSVFCVFCTSCMIVTCWIPSRFSLHSSTE 251
           +L++ +C+ S++ + CT+   V  W+ +  +LH + E
Sbjct: 214 ILAMLNCLCSLWFINCTAKGRVAVWMCN--NLHKALE 248


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/37 (27%), Positives = 23/37 (62%)
 Frame = -3

Query: 361 MLSITDCISSVFCVFCTSCMIVTCWIPSRFSLHSSTE 251
           +L++ +C+ S++ + CT+   V  W+ +  +LH + E
Sbjct: 214 ILAMLNCLCSLWFINCTAKGRVAVWMCN--NLHKALE 248


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 268 KRTCWVSNTSRSCRKYKKHRKLK 336
           K+TC   ++ ++C+   K RK+K
Sbjct: 85  KQTCDWKDSVKNCKLKNKERKVK 107


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +1

Query: 262 NAKRTCWVSNTSRSCRKYKKHRK 330
           N K TCW      +C K  + +K
Sbjct: 880 NGKPTCWRECDKATCEKLFRMKK 902


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 340 ISSVFCVFCTSCMIVTCWI 284
           +SS+   FC S  + T WI
Sbjct: 75  VSSLLIGFCASIYVGTVWI 93


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 176 LFFVDKWDSKQRSHLC 223
           L +V+ W+ K+R +LC
Sbjct: 714 LGWVEVWERKRRQYLC 729


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -3

Query: 160 IAILSLLL-KFGFLNISCHISSILGRLWSKQ*LLINI 53
           I +++L+L  F  L IS   + I+  +WSK  LLI +
Sbjct: 207 ITLVALVLFVFPALIISACYAVIVRTIWSKSKLLIPV 243


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = -1

Query: 420 LYCNNGMLLANYSL*VRFLICSLLPTVYLQFSVFFVL 310
           L+CNN      Y   V + +  +   + +QF  F V+
Sbjct: 154 LHCNNTTWRCLYRWIVLYTLSKMSQVMLIQFCAFVVV 190


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 135 FSNSERMAMLLNNYCSSLTNGIV 203
           F  +E +  L+ +YC  +T GI+
Sbjct: 148 FVENEPILYLIFSYCPIVTTGII 170


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 183 KNSNYLEALPFFRCC 139
           KNS Y++ +PF   C
Sbjct: 141 KNSPYMDGVPFVTQC 155


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 93  KMLDIWQEIFKKPNFSNSERMAMLLNNYCSSLTN 194
           + + IW +  +  N  NS+R A    N  ++ TN
Sbjct: 285 RQVKIWFQNRRMKNKKNSQRQAAQQQNNNNAATN 318


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,414
Number of Sequences: 336
Number of extensions: 4084
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)