Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0220
(641 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X99293-1|CAA67679.1| 152|Drosophila melanogaster CRP1 protein p... 102 5e-22
U59498-1|AAC47295.1| 152|Drosophila melanogaster nucleoplasmin-... 102 5e-22
AY119592-1|AAM50246.1| 152|Drosophila melanogaster LD16456p pro... 102 5e-22
AE014297-4506|AAF56988.1| 152|Drosophila melanogaster CG7917-PA... 102 5e-22
AE014297-4505|AAF56987.1| 156|Drosophila melanogaster CG7911-PA... 96 3e-20
U59497-1|AAC47294.1| 121|Drosophila melanogaster nucleoplasmin-... 73 3e-13
AY075169-1|AAL68039.1| 244|Drosophila melanogaster AT05815p pro... 31 1.0
AE014297-755|AAF54243.3| 713|Drosophila melanogaster CG31369-PA... 31 1.8
AY061181-1|AAL28729.1| 158|Drosophila melanogaster LD14807p pro... 30 3.1
AE014297-2785|AAX52968.1| 512|Drosophila melanogaster CG33518-P... 29 5.4
>X99293-1|CAA67679.1| 152|Drosophila melanogaster CRP1 protein
protein.
Length = 152
Score = 102 bits (244), Expect = 5e-22
Identities = 50/101 (49%), Positives = 72/101 (71%)
Frame = +2
Query: 56 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 235
M +E FYGVTL++ S TWD + +Y R KLVI+Q LLG +AK +E NV++V
Sbjct: 1 MAEESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEVNTP-- 56
Query: 236 QEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 358
+++V++P+AVLK GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 57 KDSVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97
>U59498-1|AAC47295.1| 152|Drosophila melanogaster
nucleoplasmin-like protein protein.
Length = 152
Score = 102 bits (244), Expect = 5e-22
Identities = 50/101 (49%), Positives = 72/101 (71%)
Frame = +2
Query: 56 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 235
M +E FYGVTL++ S TWD + +Y R KLVI+Q LLG +AK +E NV++V
Sbjct: 1 MAEESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEVNTP-- 56
Query: 236 QEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 358
+++V++P+AVLK GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 57 KDSVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97
>AY119592-1|AAM50246.1| 152|Drosophila melanogaster LD16456p
protein.
Length = 152
Score = 102 bits (244), Expect = 5e-22
Identities = 50/101 (49%), Positives = 72/101 (71%)
Frame = +2
Query: 56 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 235
M +E FYGVTL++ S TWD + +Y R KLVI+Q LLG +AK +E NV++V
Sbjct: 1 MAEESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEVNTP-- 56
Query: 236 QEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 358
+++V++P+AVLK GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 57 KDSVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97
>AE014297-4506|AAF56988.1| 152|Drosophila melanogaster CG7917-PA
protein.
Length = 152
Score = 102 bits (244), Expect = 5e-22
Identities = 50/101 (49%), Positives = 72/101 (71%)
Frame = +2
Query: 56 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 235
M +E FYGVTL++ S TWD + +Y R KLVI+Q LLG +AK +E NV++V
Sbjct: 1 MAEESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEVNTP-- 56
Query: 236 QEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 358
+++V++P+AVLK GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 57 KDSVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97
>AE014297-4505|AAF56987.1| 156|Drosophila melanogaster CG7911-PA
protein.
Length = 156
Score = 96.3 bits (229), Expect = 3e-20
Identities = 52/107 (48%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Frame = +2
Query: 56 MTDEFFYGVTLSSSHQSETWD-PEAKAEY-PRSNKLVIRQALLGPDAKPDELNVIQVEAM 229
M E FYGVTLS ++ P+ EY S+KL+I+Q LGP+AK E NV+Q E
Sbjct: 1 MESESFYGVTLSEKEAIAQFEVPDVPEEYIVHSHKLIIKQISLGPEAKTGEFNVVQAETN 60
Query: 230 ----SLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 358
++ +K+P+AVLKVGE+R +R ++EFP+ VTF LVQGSGPV
Sbjct: 61 INDDGEKKTLKIPIAVLKVGETRSLRPNVEFPNGSVTFKLVQGSGPV 107
>U59497-1|AAC47294.1| 121|Drosophila melanogaster
nucleoplasmin-like protein-short protein.
Length = 121
Score = 72.9 bits (171), Expect = 3e-13
Identities = 34/68 (50%), Positives = 52/68 (76%)
Frame = +2
Query: 155 LVIRQALLGPDAKPDELNVIQVEAMSLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFT 334
+VI+Q LLG +AK +E NV++V +++V++P+AVLK GE+R V D+EF ++ VTF
Sbjct: 1 MVIKQILLGAEAKENEFNVVEVNTP--KDSVQIPIAVLKAGETRAVNPDVEFYESKVTFK 58
Query: 335 LVQGSGPV 358
L++GSGPV
Sbjct: 59 LIKGSGPV 66
>AY075169-1|AAL68039.1| 244|Drosophila melanogaster AT05815p
protein.
Length = 244
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 87 FHHHISQRHGIQRQKQNTHAATSSSFVKHC*VQMPNQ 197
FHHH Q+ Q+Q+Q HAA +++ H Q P Q
Sbjct: 162 FHHHQQQQQQ-QQQQQQQHAAAAAAAALHAASQHPQQ 197
>AE014297-755|AAF54243.3| 713|Drosophila melanogaster CG31369-PA
protein.
Length = 713
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 87 FHHHISQRHGIQRQKQNTHAATSSSFVKHC*VQMPNQ 197
FHHH Q+ Q+Q+Q HAA +++ H Q P Q
Sbjct: 633 FHHHQQQQ---QQQQQQQHAAAAAAAALHAASQHPQQ 666
>AY061181-1|AAL28729.1| 158|Drosophila melanogaster LD14807p
protein.
Length = 158
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 459 LSSRMKIMKKVNPRAKKRKCRIMPKAKLHRPRRMPRNEQTA 581
L R ++ PR K+R R+ P+ + HRP+R +TA
Sbjct: 56 LLPRRQLPAMTAPRKKRRPRRLPPQQRRHRPKRPSLQAKTA 96
>AE014297-2785|AAX52968.1| 512|Drosophila melanogaster CG33518-PA
protein.
Length = 512
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 52 HHDGRVFLWCHPFIITSVRDMGSRGK 129
H GR F++C P SV MG RG+
Sbjct: 445 HLSGRRFVFCFPISTQSVAQMGRRGR 470
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,511,215
Number of Sequences: 53049
Number of extensions: 493343
Number of successful extensions: 1810
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1783
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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