Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0219
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   3.0  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   3.0  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.1  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   9.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.1  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 214 LDKLKAERERGITIDIALWKFETSKYYVTII 306
           L KLK   + G  + +A  KF   K+YV I+
Sbjct: 78  LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 108


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 214 LDKLKAERERGITIDIALWKFETSKYYVTII 306
           L KLK   + G  + +A  KF   K+YV I+
Sbjct: 4   LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 34


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = +1

Query: 463 LGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY--NPXAVAFVPISGWHGDN 636
           LG+K L + +++   T   Y    F   K +V    ++ G+  +      VPISG H D 
Sbjct: 344 LGMKYLDMVISE---TLRKYPLAPFLNRKSDVKYTFEETGFTLDKGVSIMVPISGLHYDP 400

Query: 637 MLEPSP 654
              P P
Sbjct: 401 EYYPDP 406


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +2

Query: 629 ETTCWSLHQMPW 664
           E  CW+  Q PW
Sbjct: 187 EYDCWATFQEPW 198


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 321 QRFHQEHDHRNLS 359
           + FH+EHD R  S
Sbjct: 260 RHFHEEHDTRRAS 272


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -3

Query: 579  NLLDV*GYFLLDFLKSGLTVWWFSGIHFVYSYDE 478
            N L V   FLL   K  L + W  G+    +YDE
Sbjct: 1276 NALFVLIVFLLTLKKDYLHIKWPFGVKTNITYDE 1309


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -3

Query: 579  NLLDV*GYFLLDFLKSGLTVWWFSGIHFVYSYDE 478
            N L V   FLL   K  L + W  G+    +YDE
Sbjct: 1276 NALFVLIVFLLTLKKDYLHIKWPFGVKTNITYDE 1309


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,568
Number of Sequences: 336
Number of extensions: 3403
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)