BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0218 (697 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta... 48 6e-06 At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta... 48 6e-06 At2g04740.1 68415.m00484 ankyrin repeat family protein contains ... 44 1e-04 At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family pr... 42 5e-04 At3g43700.1 68416.m04664 speckle-type POZ protein-related contai... 41 7e-04 At5g21010.1 68418.m02497 speckle-type POZ protein-related contai... 41 0.001 At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter... 40 0.001 At3g06190.1 68416.m00711 speckle-type POZ protein-related simila... 40 0.001 At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ... 40 0.001 At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family pr... 38 0.006 At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ... 38 0.008 At1g01640.2 68414.m00082 speckle-type POZ protein-related contai... 38 0.008 At1g01640.1 68414.m00081 speckle-type POZ protein-related contai... 38 0.008 At3g03740.1 68416.m00379 speckle-type POZ protein-related contai... 36 0.019 At5g48510.1 68418.m05998 speckle-type POZ protein-related contai... 36 0.026 At2g40440.1 68415.m04990 BTB/POZ domain-containing protein conta... 35 0.059 At2g39760.1 68415.m04882 speckle-type POZ protein-related contai... 34 0.078 At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ... 32 0.32 At5g19000.1 68418.m02257 speckle-type POZ protein-related contai... 32 0.32 At3g06190.2 68416.m00712 speckle-type POZ protein-related simila... 31 0.96 At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Inter... 30 1.7 At4g04090.1 68417.m00578 speckle-type POZ protein-related contai... 29 2.2 At4g09780.1 68417.m01607 meprin and TRAF homology domain-contain... 28 5.1 >At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains Pfam PF00651: BTB/POZ domain; contains Interpro IPR000210/ PS50097: BTBB/POZ domain; similar to MigA (GI:1841872) [Dictyostelium discoideum] Length = 809 Score = 48.0 bits (109), Expect = 6e-06 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 4/76 (5%) Frame = +2 Query: 197 LLSRGDLVDVTLAAEGRLL--QAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSA 364 L S G+ D+ + L Q+HK++LS+ S F +MF M+ + ++L DVS A Sbjct: 344 LYSTGEYSDIKIYLSDHSLTFQSHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEA 403 Query: 365 LRDLLQFMYQGEVNVK 412 + ++ FMY GE+N++ Sbjct: 404 FKAMMNFMYSGELNME 419 Score = 35.9 bits (79), Expect = 0.026 Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 2/104 (1%) Frame = +2 Query: 185 GFHGLLSRGDLVD-VTLAAEGRL-LQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSH 358 G L L D V L E + + AHK++L F + + ++ L+ VS+ Sbjct: 200 GLGNFLESWQLSDTVFLVGEEEMDVPAHKVILQASGN-----FPLRSSDGDVIQLRGVSY 254 Query: 359 SALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLTGNQNEE 490 L LLQ++Y G + + ELA + + +V L Q EE Sbjct: 255 PILHALLQYIYTGRTQILESELAPLRDLSSKFEVMSLV-RQCEE 297 >At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains Pfam PF00651: BTB/POZ domain; contains Interpro IPR000210/ PS50097: BTBB/POZ domain; similar to MigA (GI:1841872) [Dictyostelium discoideum] Length = 809 Score = 48.0 bits (109), Expect = 6e-06 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 4/76 (5%) Frame = +2 Query: 197 LLSRGDLVDVTLAAEGRLL--QAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSA 364 L S G+ D+ + L Q+HK++LS+ S F +MF M+ + ++L DVS A Sbjct: 344 LYSTGEYSDIKIYLSDHSLTFQSHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEA 403 Query: 365 LRDLLQFMYQGEVNVK 412 + ++ FMY GE+N++ Sbjct: 404 FKAMMNFMYSGELNME 419 Score = 35.9 bits (79), Expect = 0.026 Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 2/104 (1%) Frame = +2 Query: 185 GFHGLLSRGDLVD-VTLAAEGRL-LQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSH 358 G L L D V L E + + AHK++L F + + ++ L+ VS+ Sbjct: 200 GLGNFLESWQLSDTVFLVGEEEMDVPAHKVILQASGN-----FPLRSSDGDVIQLRGVSY 254 Query: 359 SALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLTGNQNEE 490 L LLQ++Y G + + ELA + + +V L Q EE Sbjct: 255 PILHALLQYIYTGRTQILESELAPLRDLSSKFEVMSLV-RQCEE 297 >At2g04740.1 68415.m00484 ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023 Length = 578 Score = 43.6 bits (98), Expect = 1e-04 Identities = 21/85 (24%), Positives = 46/85 (54%), Gaps = 2/85 (2%) Frame = +2 Query: 221 DVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN-PTQHPIVFLKD-VSHSALRDLLQFMYQ 394 DV +GR ++AH+++LS SP+F++ F+ + + F K+ +S+ AL L+ F Y Sbjct: 174 DVMFYVQGRPIEAHRVILSARSPFFKQKFENEWKDRREVRFSKEKLSYPALCSLIHFFYS 233 Query: 395 GEVNVKQEELASFISTAEQLQVKGL 469 + + +++ + + + + L Sbjct: 234 DRLEISVDDMEDLVRICKVCKCESL 258 >At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein contains armadillo/beta-catenin-like repeats, Pfam:PF00514 and a BTB/POZ domain, Pfam:PF00651 Length = 710 Score = 41.5 bits (93), Expect = 5e-04 Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%) Frame = +2 Query: 200 LSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALRD 373 ++ L DVT EGR AH++ L S F+ MF + + + ++ Sbjct: 535 VNNATLSDVTFLVEGRTFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIKWEVFEL 594 Query: 374 LLQFMYQGEVNVKQEELASFISTAEQLQVKGL 469 +++F+Y G V++ E + A+Q ++GL Sbjct: 595 MMRFIYTGSVDITNEISKDLLRAADQYLLEGL 626 >At3g43700.1 68416.m04664 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917: MATH domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] Length = 415 Score = 41.1 bits (92), Expect = 7e-04 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 1/88 (1%) Frame = +2 Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQ-HPIVFLK 346 + + + F LL DVT G QAHKLVL+ S +F+ MF + + V + Sbjct: 189 SELGSHFGKLLDTLQGSDVTFDVAGEKFQAHKLVLAARSQFFRSMFYNTLAENNSDVVIS 248 Query: 347 DVSHSALRDLLQFMYQGEVNVKQEELAS 430 D+ + LL FMY+ + E L + Sbjct: 249 DLEPKVFKALLHFMYKDSLPGDVEPLTA 276 >At5g21010.1 68418.m02497 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917: MATH domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] Length = 410 Score = 40.7 bits (91), Expect = 0.001 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Frame = +2 Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQ-EMFKMNPTQHPIVFLK 346 + + + F LL + D+T G AHKLVL+ SP+F+ + F + V + Sbjct: 182 SELGSHFGVLLDSMEGSDITFNIAGEKFLAHKLVLAARSPFFKSKFFSEFEANNTEVTIN 241 Query: 347 DVSHSALRDLLQFMYQ 394 D+ + LLQFMY+ Sbjct: 242 DLEPKVFKALLQFMYK 257 >At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56 protein (GI:17483747) [Mus musculus] Length = 243 Score = 40.3 bits (90), Expect = 0.001 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%) Frame = +2 Query: 251 LQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 424 + AHK VL SP F+ M + M + + + DVS+ ALR + ++Y E + ++ Sbjct: 80 IPAHKSVLVSRSPVFKAMLENEMEESLSGTIKISDVSYDALRTFVYYLYTAEACLDEQMA 139 Query: 425 ASFISTAEQLQVKGL 469 + +E+ QVK L Sbjct: 140 CDLLVMSEKYQVKHL 154 >At3g06190.1 68416.m00711 speckle-type POZ protein-related similar to SPOP (novel nuclear speckle-type protein) (SP:O43791) [Homo sapiens]; contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917: MATH domain Length = 406 Score = 40.3 bits (90), Expect = 0.001 Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 2/96 (2%) Frame = +2 Query: 188 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFLKDVSHS 361 F LL G DVT +G AHKLVL+ S F+ ++F + + ++DV Sbjct: 192 FGKLLESGKGADVTFEVDGETFPAHKLVLAARSAVFRAQLFGPLRSENTNCIIIEDVQAP 251 Query: 362 ALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 469 + LL F+Y E+ Q+ + + + A L + L Sbjct: 252 IFKMLLHFIYWDEMPDMQDLIGTDLKWASTLVAQHL 287 >At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ domain-containing protein contains Pfam domain, PF00023: Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain Length = 491 Score = 40.3 bits (90), Expect = 0.001 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = +2 Query: 173 NMSAGFHGLLSRGDLV-DVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKD 349 ++S F LL G DVT + EGRL+ AH+ +L+ S +F++ F + P+ + Sbjct: 10 SLSLDFLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGTDSPQPVTGIDP 69 Query: 350 VSHSAL 367 H ++ Sbjct: 70 TQHGSV 75 >At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein contains armadillo/beta-catenin-like repeats, Pfam:PF00514 and a BTB/POZ domain, Pfam:PF00651 Length = 709 Score = 37.9 bits (84), Expect = 0.006 Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 2/85 (2%) Frame = +2 Query: 221 DVTLAAEGRLLQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQ 394 DVT +G+ AHK+ L S F+ MF V + ++ +++F+Y Sbjct: 541 DVTFLIDGKQFYAHKIGLVASSDIFRAMFDGLYKERNAQNVEIPNIRWEVFELMMKFIYS 600 Query: 395 GEVNVKQEELASFISTAEQLQVKGL 469 G +N+ + + A+Q ++GL Sbjct: 601 GRINIAKHLAKDLLVAADQYLLEGL 625 >At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ domain-containing protein contains Pfam domain, PF00023: Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain Length = 467 Score = 37.5 bits (83), Expect = 0.008 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 20/99 (20%) Frame = +2 Query: 173 NMSAGFHGLLSRGDLV-DVTLAAEGRLLQAHKLVLSVCSPYFQEMF-KMNPTQ---HP-- 331 +MS + LL G DVT + EGRL+ AH+ +L+ S +F++ F + +P+Q P Sbjct: 11 SMSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCESDPSQPGAEPAN 70 Query: 332 -------------IVFLKDVSHSALRDLLQFMYQGEVNV 409 ++ + V + LLQF+Y G+V++ Sbjct: 71 QTGSGARAAAVGGVIPVNSVGYEVFLLLLQFLYSGQVSI 109 >At1g01640.2 68414.m00082 speckle-type POZ protein-related contains Pfam profile:PF00651 BTB/POZ domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] Length = 207 Score = 37.5 bits (83), Expect = 0.008 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%) Frame = +2 Query: 251 LQAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 421 + HK VL+ S F+ M + + + L D+SH L+ LL+F+Y G + + Sbjct: 37 IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQ 96 Query: 422 LASFISTAEQLQVKGL 469 S A++ + L Sbjct: 97 YRSLYLAADKYDISYL 112 >At1g01640.1 68414.m00081 speckle-type POZ protein-related contains Pfam profile:PF00651 BTB/POZ domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] Length = 207 Score = 37.5 bits (83), Expect = 0.008 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%) Frame = +2 Query: 251 LQAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 421 + HK VL+ S F+ M + + + L D+SH L+ LL+F+Y G + + Sbjct: 37 IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQ 96 Query: 422 LASFISTAEQLQVKGL 469 S A++ + L Sbjct: 97 YRSLYLAADKYDISYL 112 >At3g03740.1 68416.m00379 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917: MATH domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] Length = 465 Score = 36.3 bits (80), Expect = 0.019 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Frame = +2 Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQ-EMFKMNPTQHPIVFLK 346 +++ + F LL D D+T G +AH+LVL+ SP F+ E + + + + Sbjct: 200 SDIGSHFGMLLENEDGSDITFNVSGEKFRAHRLVLAARSPVFESEFLDVTGEEDRDIEVT 259 Query: 347 DVSHSALRDLLQFMYQ 394 D+ + LL ++Y+ Sbjct: 260 DMEPKVFKALLHYIYK 275 >At5g48510.1 68418.m05998 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] Length = 224 Score = 35.9 bits (79), Expect = 0.026 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 13/102 (12%) Frame = +2 Query: 173 NMSAGFHGLLSRGDLVDVTLAA----EGRLLQAHKLVLSVCSPYFQEMFKMN----PTQH 328 + S G +L+ VDV L A EG + AHKL+L+ S F+ MF+++ T+H Sbjct: 9 HFSGGLAKVLAEKWQVDVMLKAKNSDEGSAISAHKLILASRSEVFKNMFELDEFKTSTKH 68 Query: 329 -PIVFLKDVSHSALRDLLQFMYQG----EVNVKQEELASFIS 439 + L ++ H L ++F+ NVKQ + +++ Sbjct: 69 VETITLSEMKHEELEAFVEFICSDGSMLSANVKQHARSLYLA 110 >At2g40440.1 68415.m04990 BTB/POZ domain-containing protein contains Pfam PF00651: BTB/POZ domain; contains Interpro IPR000210/ PS50097: BTBB/POZ domain; Length = 194 Score = 34.7 bits (76), Expect = 0.059 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 9/78 (11%) Frame = +2 Query: 185 GFHGLLSRGDLVDVTLAA-----EGRLLQAHKLVLSVCSPYFQEMFKMN----PTQHPIV 337 GF +L VDV L A EG AHKLVLS S F++M + + Q + Sbjct: 13 GFAKILKEQRQVDVRLKAGDSGDEGASTSAHKLVLSARSEVFKKMLESDEIKASAQLETI 72 Query: 338 FLKDVSHSALRDLLQFMY 391 L ++ H L ++F+Y Sbjct: 73 TLCEMKHEELEAFIEFIY 90 >At2g39760.1 68415.m04882 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917: MATH domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] Length = 408 Score = 34.3 bits (75), Expect = 0.078 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 2/76 (2%) Frame = +2 Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF--KMNPTQHPIVFL 343 +NM G LL D+ +AHKL+L+ SP F+ F + + + Sbjct: 178 SNMGQGLKDLLDSEVGCDIAFQVGDETYKAHKLILAARSPVFRAQFFGPIGNNNVDRIVI 237 Query: 344 KDVSHSALRDLLQFMY 391 D+ S + +L F+Y Sbjct: 238 DDIEPSIFKAMLSFIY 253 >At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ domain-containing protein contains Pfam domain, PF00023: Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain Length = 586 Score = 32.3 bits (70), Expect = 0.32 Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 12/88 (13%) Frame = +2 Query: 176 MSAGFHGLLSRGDL--VDVTLAAEGRLLQAHKLVLSVCSPYFQEMF----KMNPTQHPIV 337 +S+ LLS D D + +G + H+ +L+ S +FQ++F K++ T+ P Sbjct: 44 LSSNLEQLLSNSDCDYSDAEIIVDGVPVGVHRCILAARSKFFQDLFKKEKKISKTEKPKY 103 Query: 338 FLKD------VSHSALRDLLQFMYQGEV 403 L++ V+H A L ++Y G + Sbjct: 104 QLREMLPYGAVAHEAFLYFLSYIYTGRL 131 >At5g19000.1 68418.m02257 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917: MATH domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] Length = 442 Score = 32.3 bits (70), Expect = 0.32 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +2 Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYF 295 +N+ LL G DV +G AHKLVL+ SP F Sbjct: 187 SNLGQQLGNLLESGKGCDVVFQVDGETFNAHKLVLATRSPVF 228 >At3g06190.2 68416.m00712 speckle-type POZ protein-related similar to SPOP (novel nuclear speckle-type protein) (SP:O43791) [Homo sapiens]; contains Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917: MATH domain Length = 295 Score = 30.7 bits (66), Expect = 0.96 Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = +2 Query: 188 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQ 298 F LL G DVT +G AHKLVL+ S F+ Sbjct: 192 FGKLLESGKGADVTFEVDGETFPAHKLVLAARSAVFR 228 >At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Interpro IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56 protein (GI:17483747) [Mus musculus] Length = 329 Score = 29.9 bits (64), Expect = 1.7 Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = +2 Query: 197 LLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALR 370 +L+ D+T+ A + AH+ VL+ SP F+ MF + + + + + D+ A + Sbjct: 157 MLTESIYTDITINASDGSIGAHRAVLAARSPVFRSMFLHDLKEKELSEINVLDMPLDACQ 216 Query: 371 DLLQFMY 391 L ++Y Sbjct: 217 AFLSYIY 223 >At4g04090.1 68417.m00578 speckle-type POZ protein-related contains Pfam PF00651 : BTB/POZ domain; similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens] Length = 192 Score = 29.5 bits (63), Expect = 2.2 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%) Frame = +2 Query: 218 VDVTLAA----EGRLLQAHKLVLSVCSPYFQEMFKMN----PTQHPIVFLKDVSHSALRD 373 VDV L A + + AHK +LS S F+EMF+ + ++ + L ++ H L Sbjct: 23 VDVRLMARDSEKDAAISAHKRILSARSEVFEEMFESDKYKASSKLETITLSEMKHEVLEA 82 Query: 374 LLQFMY 391 + F Y Sbjct: 83 FVDFTY 88 >At4g09780.1 68417.m01607 meprin and TRAF homology domain-containing protein / MATH domain-containing protein low similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain Length = 443 Score = 28.3 bits (60), Expect = 5.1 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 203 SRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQH 328 S+G LV+ T+ E LL + + +C + F +NP QH Sbjct: 351 SKGYLVEDTIVLETTLLCVTETKVKLCDMCKYKFFLLNPRQH 392 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,635,398 Number of Sequences: 28952 Number of extensions: 256991 Number of successful extensions: 637 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 617 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 633 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1487069504 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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