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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0218
         (697 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta...    48   6e-06
At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta...    48   6e-06
At2g04740.1 68415.m00484 ankyrin repeat family protein contains ...    44   1e-04
At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family pr...    42   5e-04
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai...    41   7e-04
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai...    41   0.001
At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter...    40   0.001
At3g06190.1 68416.m00711 speckle-type POZ protein-related simila...    40   0.001
At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ...    40   0.001
At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family pr...    38   0.006
At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ...    38   0.008
At1g01640.2 68414.m00082 speckle-type POZ protein-related contai...    38   0.008
At1g01640.1 68414.m00081 speckle-type POZ protein-related contai...    38   0.008
At3g03740.1 68416.m00379 speckle-type POZ protein-related contai...    36   0.019
At5g48510.1 68418.m05998 speckle-type POZ protein-related contai...    36   0.026
At2g40440.1 68415.m04990 BTB/POZ domain-containing protein conta...    35   0.059
At2g39760.1 68415.m04882 speckle-type POZ protein-related contai...    34   0.078
At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ...    32   0.32 
At5g19000.1 68418.m02257 speckle-type POZ protein-related contai...    32   0.32 
At3g06190.2 68416.m00712 speckle-type POZ protein-related simila...    31   0.96 
At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Inter...    30   1.7  
At4g04090.1 68417.m00578 speckle-type POZ protein-related contai...    29   2.2  
At4g09780.1 68417.m01607 meprin and TRAF homology domain-contain...    28   5.1  

>At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains
           Pfam PF00651: BTB/POZ domain; contains Interpro
           IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
           (GI:1841872) [Dictyostelium discoideum]
          Length = 809

 Score = 48.0 bits (109), Expect = 6e-06
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
 Frame = +2

Query: 197 LLSRGDLVDVTLAAEGRLL--QAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSA 364
           L S G+  D+ +      L  Q+HK++LS+ S  F +MF   M+ +    ++L DVS  A
Sbjct: 344 LYSTGEYSDIKIYLSDHSLTFQSHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEA 403

Query: 365 LRDLLQFMYQGEVNVK 412
            + ++ FMY GE+N++
Sbjct: 404 FKAMMNFMYSGELNME 419



 Score = 35.9 bits (79), Expect = 0.026
 Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
 Frame = +2

Query: 185 GFHGLLSRGDLVD-VTLAAEGRL-LQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSH 358
           G    L    L D V L  E  + + AHK++L          F +  +   ++ L+ VS+
Sbjct: 200 GLGNFLESWQLSDTVFLVGEEEMDVPAHKVILQASGN-----FPLRSSDGDVIQLRGVSY 254

Query: 359 SALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLTGNQNEE 490
             L  LLQ++Y G   + + ELA     + + +V  L   Q EE
Sbjct: 255 PILHALLQYIYTGRTQILESELAPLRDLSSKFEVMSLV-RQCEE 297


>At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains
           Pfam PF00651: BTB/POZ domain; contains Interpro
           IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
           (GI:1841872) [Dictyostelium discoideum]
          Length = 809

 Score = 48.0 bits (109), Expect = 6e-06
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
 Frame = +2

Query: 197 LLSRGDLVDVTLAAEGRLL--QAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSA 364
           L S G+  D+ +      L  Q+HK++LS+ S  F +MF   M+ +    ++L DVS  A
Sbjct: 344 LYSTGEYSDIKIYLSDHSLTFQSHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEA 403

Query: 365 LRDLLQFMYQGEVNVK 412
            + ++ FMY GE+N++
Sbjct: 404 FKAMMNFMYSGELNME 419



 Score = 35.9 bits (79), Expect = 0.026
 Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
 Frame = +2

Query: 185 GFHGLLSRGDLVD-VTLAAEGRL-LQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSH 358
           G    L    L D V L  E  + + AHK++L          F +  +   ++ L+ VS+
Sbjct: 200 GLGNFLESWQLSDTVFLVGEEEMDVPAHKVILQASGN-----FPLRSSDGDVIQLRGVSY 254

Query: 359 SALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLTGNQNEE 490
             L  LLQ++Y G   + + ELA     + + +V  L   Q EE
Sbjct: 255 PILHALLQYIYTGRTQILESELAPLRDLSSKFEVMSLV-RQCEE 297


>At2g04740.1 68415.m00484 ankyrin repeat family protein contains
           ankyrin repeats, Pfam:PF00023
          Length = 578

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 21/85 (24%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
 Frame = +2

Query: 221 DVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN-PTQHPIVFLKD-VSHSALRDLLQFMYQ 394
           DV    +GR ++AH+++LS  SP+F++ F+     +  + F K+ +S+ AL  L+ F Y 
Sbjct: 174 DVMFYVQGRPIEAHRVILSARSPFFKQKFENEWKDRREVRFSKEKLSYPALCSLIHFFYS 233

Query: 395 GEVNVKQEELASFISTAEQLQVKGL 469
             + +  +++   +   +  + + L
Sbjct: 234 DRLEISVDDMEDLVRICKVCKCESL 258


>At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family
           protein / BTB/POZ domain-containing protein contains
           armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
           BTB/POZ domain, Pfam:PF00651
          Length = 710

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
 Frame = +2

Query: 200 LSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALRD 373
           ++   L DVT   EGR   AH++ L   S  F+ MF     +     + + ++       
Sbjct: 535 VNNATLSDVTFLVEGRTFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIKWEVFEL 594

Query: 374 LLQFMYQGEVNVKQEELASFISTAEQLQVKGL 469
           +++F+Y G V++  E     +  A+Q  ++GL
Sbjct: 595 MMRFIYTGSVDITNEISKDLLRAADQYLLEGL 626


>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
           Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
           MATH domain; similar to Speckle-type POZ protein
           (SP:O43791) [Homo sapiens]
          Length = 415

 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
 Frame = +2

Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQ-HPIVFLK 346
           + + + F  LL      DVT    G   QAHKLVL+  S +F+ MF     + +  V + 
Sbjct: 189 SELGSHFGKLLDTLQGSDVTFDVAGEKFQAHKLVLAARSQFFRSMFYNTLAENNSDVVIS 248

Query: 347 DVSHSALRDLLQFMYQGEVNVKQEELAS 430
           D+     + LL FMY+  +    E L +
Sbjct: 249 DLEPKVFKALLHFMYKDSLPGDVEPLTA 276


>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
           Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
           MATH domain; similar to Speckle-type POZ protein
           (SP:O43791) [Homo sapiens]
          Length = 410

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = +2

Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQ-EMFKMNPTQHPIVFLK 346
           + + + F  LL   +  D+T    G    AHKLVL+  SP+F+ + F      +  V + 
Sbjct: 182 SELGSHFGVLLDSMEGSDITFNIAGEKFLAHKLVLAARSPFFKSKFFSEFEANNTEVTIN 241

Query: 347 DVSHSALRDLLQFMYQ 394
           D+     + LLQFMY+
Sbjct: 242 DLEPKVFKALLQFMYK 257


>At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro
           IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
           protein (GI:17483747) [Mus musculus]
          Length = 243

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
 Frame = +2

Query: 251 LQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 424
           + AHK VL   SP F+ M +  M  +    + + DVS+ ALR  + ++Y  E  + ++  
Sbjct: 80  IPAHKSVLVSRSPVFKAMLENEMEESLSGTIKISDVSYDALRTFVYYLYTAEACLDEQMA 139

Query: 425 ASFISTAEQLQVKGL 469
              +  +E+ QVK L
Sbjct: 140 CDLLVMSEKYQVKHL 154


>At3g06190.1 68416.m00711 speckle-type POZ protein-related similar
           to SPOP (novel nuclear speckle-type protein)
           (SP:O43791)   [Homo sapiens]; contains Pfam PF00651 :
           BTB/POZ domain; contains Pfam PF00917: MATH domain
          Length = 406

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
 Frame = +2

Query: 188 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFLKDVSHS 361
           F  LL  G   DVT   +G    AHKLVL+  S  F+ ++F  +       + ++DV   
Sbjct: 192 FGKLLESGKGADVTFEVDGETFPAHKLVLAARSAVFRAQLFGPLRSENTNCIIIEDVQAP 251

Query: 362 ALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 469
             + LL F+Y  E+   Q+ + + +  A  L  + L
Sbjct: 252 IFKMLLHFIYWDEMPDMQDLIGTDLKWASTLVAQHL 287


>At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ
           domain-containing protein contains Pfam domain, PF00023:
           Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
          Length = 491

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = +2

Query: 173 NMSAGFHGLLSRGDLV-DVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKD 349
           ++S  F  LL  G    DVT + EGRL+ AH+ +L+  S +F++ F    +  P+  +  
Sbjct: 10  SLSLDFLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGTDSPQPVTGIDP 69

Query: 350 VSHSAL 367
             H ++
Sbjct: 70  TQHGSV 75


>At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family
           protein / BTB/POZ domain-containing protein contains
           armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
           BTB/POZ domain, Pfam:PF00651
          Length = 709

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
 Frame = +2

Query: 221 DVTLAAEGRLLQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQ 394
           DVT   +G+   AHK+ L   S  F+ MF           V + ++       +++F+Y 
Sbjct: 541 DVTFLIDGKQFYAHKIGLVASSDIFRAMFDGLYKERNAQNVEIPNIRWEVFELMMKFIYS 600

Query: 395 GEVNVKQEELASFISTAEQLQVKGL 469
           G +N+ +      +  A+Q  ++GL
Sbjct: 601 GRINIAKHLAKDLLVAADQYLLEGL 625


>At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ
           domain-containing protein contains Pfam domain, PF00023:
           Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
          Length = 467

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 20/99 (20%)
 Frame = +2

Query: 173 NMSAGFHGLLSRGDLV-DVTLAAEGRLLQAHKLVLSVCSPYFQEMF-KMNPTQ---HP-- 331
           +MS  +  LL  G    DVT + EGRL+ AH+ +L+  S +F++ F + +P+Q    P  
Sbjct: 11  SMSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCESDPSQPGAEPAN 70

Query: 332 -------------IVFLKDVSHSALRDLLQFMYQGEVNV 409
                        ++ +  V +     LLQF+Y G+V++
Sbjct: 71  QTGSGARAAAVGGVIPVNSVGYEVFLLLLQFLYSGQVSI 109


>At1g01640.2 68414.m00082 speckle-type POZ protein-related contains
           Pfam profile:PF00651 BTB/POZ domain; similar to
           Speckle-type POZ protein (SP:O43791) [Homo sapiens]
          Length = 207

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
 Frame = +2

Query: 251 LQAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 421
           +  HK VL+  S  F+ M    +   +    + L D+SH  L+ LL+F+Y G +     +
Sbjct: 37  IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQ 96

Query: 422 LASFISTAEQLQVKGL 469
             S    A++  +  L
Sbjct: 97  YRSLYLAADKYDISYL 112


>At1g01640.1 68414.m00081 speckle-type POZ protein-related contains
           Pfam profile:PF00651 BTB/POZ domain; similar to
           Speckle-type POZ protein (SP:O43791) [Homo sapiens]
          Length = 207

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
 Frame = +2

Query: 251 LQAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 421
           +  HK VL+  S  F+ M    +   +    + L D+SH  L+ LL+F+Y G +     +
Sbjct: 37  IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQ 96

Query: 422 LASFISTAEQLQVKGL 469
             S    A++  +  L
Sbjct: 97  YRSLYLAADKYDISYL 112


>At3g03740.1 68416.m00379 speckle-type POZ protein-related contains
           Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
           MATH domain; similar to Speckle-type POZ protein
           (SP:O43791) [Homo sapiens]
          Length = 465

 Score = 36.3 bits (80), Expect = 0.019
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = +2

Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQ-EMFKMNPTQHPIVFLK 346
           +++ + F  LL   D  D+T    G   +AH+LVL+  SP F+ E   +   +   + + 
Sbjct: 200 SDIGSHFGMLLENEDGSDITFNVSGEKFRAHRLVLAARSPVFESEFLDVTGEEDRDIEVT 259

Query: 347 DVSHSALRDLLQFMYQ 394
           D+     + LL ++Y+
Sbjct: 260 DMEPKVFKALLHYIYK 275


>At5g48510.1 68418.m05998 speckle-type POZ protein-related contains
           Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
           POZ protein (SP:O43791) [Homo sapiens]
          Length = 224

 Score = 35.9 bits (79), Expect = 0.026
 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
 Frame = +2

Query: 173 NMSAGFHGLLSRGDLVDVTLAA----EGRLLQAHKLVLSVCSPYFQEMFKMN----PTQH 328
           + S G   +L+    VDV L A    EG  + AHKL+L+  S  F+ MF+++     T+H
Sbjct: 9   HFSGGLAKVLAEKWQVDVMLKAKNSDEGSAISAHKLILASRSEVFKNMFELDEFKTSTKH 68

Query: 329 -PIVFLKDVSHSALRDLLQFMYQG----EVNVKQEELASFIS 439
              + L ++ H  L   ++F+         NVKQ   + +++
Sbjct: 69  VETITLSEMKHEELEAFVEFICSDGSMLSANVKQHARSLYLA 110


>At2g40440.1 68415.m04990 BTB/POZ domain-containing protein contains
           Pfam PF00651: BTB/POZ domain; contains  Interpro
           IPR000210/ PS50097: BTBB/POZ domain;
          Length = 194

 Score = 34.7 bits (76), Expect = 0.059
 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
 Frame = +2

Query: 185 GFHGLLSRGDLVDVTLAA-----EGRLLQAHKLVLSVCSPYFQEMFKMN----PTQHPIV 337
           GF  +L     VDV L A     EG    AHKLVLS  S  F++M + +      Q   +
Sbjct: 13  GFAKILKEQRQVDVRLKAGDSGDEGASTSAHKLVLSARSEVFKKMLESDEIKASAQLETI 72

Query: 338 FLKDVSHSALRDLLQFMY 391
            L ++ H  L   ++F+Y
Sbjct: 73  TLCEMKHEELEAFIEFIY 90


>At2g39760.1 68415.m04882 speckle-type POZ protein-related contains
           Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
           MATH domain; similar to Speckle-type POZ protein
           (SP:O43791) [Homo sapiens]
          Length = 408

 Score = 34.3 bits (75), Expect = 0.078
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
 Frame = +2

Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF--KMNPTQHPIVFL 343
           +NM  G   LL      D+         +AHKL+L+  SP F+  F   +       + +
Sbjct: 178 SNMGQGLKDLLDSEVGCDIAFQVGDETYKAHKLILAARSPVFRAQFFGPIGNNNVDRIVI 237

Query: 344 KDVSHSALRDLLQFMY 391
            D+  S  + +L F+Y
Sbjct: 238 DDIEPSIFKAMLSFIY 253


>At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ
           domain-containing protein contains Pfam domain, PF00023:
           Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
          Length = 586

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
 Frame = +2

Query: 176 MSAGFHGLLSRGDL--VDVTLAAEGRLLQAHKLVLSVCSPYFQEMF----KMNPTQHPIV 337
           +S+    LLS  D    D  +  +G  +  H+ +L+  S +FQ++F    K++ T+ P  
Sbjct: 44  LSSNLEQLLSNSDCDYSDAEIIVDGVPVGVHRCILAARSKFFQDLFKKEKKISKTEKPKY 103

Query: 338 FLKD------VSHSALRDLLQFMYQGEV 403
            L++      V+H A    L ++Y G +
Sbjct: 104 QLREMLPYGAVAHEAFLYFLSYIYTGRL 131


>At5g19000.1 68418.m02257 speckle-type POZ protein-related contains
           Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
           MATH domain; similar to Speckle-type POZ protein
           (SP:O43791) [Homo sapiens]
          Length = 442

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +2

Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYF 295
           +N+      LL  G   DV    +G    AHKLVL+  SP F
Sbjct: 187 SNLGQQLGNLLESGKGCDVVFQVDGETFNAHKLVLATRSPVF 228


>At3g06190.2 68416.m00712 speckle-type POZ protein-related similar
           to SPOP (novel nuclear speckle-type protein)
           (SP:O43791)   [Homo sapiens]; contains Pfam PF00651 :
           BTB/POZ domain; contains Pfam PF00917: MATH domain
          Length = 295

 Score = 30.7 bits (66), Expect = 0.96
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +2

Query: 188 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQ 298
           F  LL  G   DVT   +G    AHKLVL+  S  F+
Sbjct: 192 FGKLLESGKGADVTFEVDGETFPAHKLVLAARSAVFR 228


>At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Interpro
           IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
           protein (GI:17483747) [Mus musculus]
          Length = 329

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = +2

Query: 197 LLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALR 370
           +L+     D+T+ A    + AH+ VL+  SP F+ MF  +  +  +  + + D+   A +
Sbjct: 157 MLTESIYTDITINASDGSIGAHRAVLAARSPVFRSMFLHDLKEKELSEINVLDMPLDACQ 216

Query: 371 DLLQFMY 391
             L ++Y
Sbjct: 217 AFLSYIY 223


>At4g04090.1 68417.m00578 speckle-type POZ protein-related contains
           Pfam PF00651 : BTB/POZ domain;  similar to Speckle-type
           POZ protein (SP:O43791) [Homo sapiens]
          Length = 192

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
 Frame = +2

Query: 218 VDVTLAA----EGRLLQAHKLVLSVCSPYFQEMFKMN----PTQHPIVFLKDVSHSALRD 373
           VDV L A    +   + AHK +LS  S  F+EMF+ +     ++   + L ++ H  L  
Sbjct: 23  VDVRLMARDSEKDAAISAHKRILSARSEVFEEMFESDKYKASSKLETITLSEMKHEVLEA 82

Query: 374 LLQFMY 391
            + F Y
Sbjct: 83  FVDFTY 88


>At4g09780.1 68417.m01607 meprin and TRAF homology domain-containing
           protein / MATH domain-containing protein low similarity
           to ubiquitin-specific protease 12 [Arabidopsis thaliana]
           GI:11993471; contains Pfam profile PF00917: MATH domain
          Length = 443

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +2

Query: 203 SRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQH 328
           S+G LV+ T+  E  LL   +  + +C     + F +NP QH
Sbjct: 351 SKGYLVEDTIVLETTLLCVTETKVKLCDMCKYKFFLLNPRQH 392


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,635,398
Number of Sequences: 28952
Number of extensions: 256991
Number of successful extensions: 637
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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