Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0215
(637 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855494-1|ABH88181.1| 99|Tribolium castaneum chemosensory pro... 22 3.7
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 21 6.5
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 21 6.5
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 8.6
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 8.6
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 8.6
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 8.6
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 8.6
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 8.6
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 8.6
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 21 8.6
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 21 8.6
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 8.6
>DQ855494-1|ABH88181.1| 99|Tribolium castaneum chemosensory
protein 8 protein.
Length = 99
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 471 VPDIAAPACMRCDAHFTAFRRR 536
+P+I C RCD+ A RR
Sbjct: 56 LPEIIGKNCERCDSRQVANARR 77
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 21.4 bits (43), Expect = 6.5
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 47 RGRPQEHPEVRLPDEPVAGHDGDARTSGEXR 139
RG V L E +G+A+TSG+ R
Sbjct: 643 RGADDRAAYVNLLKELRVAFEGEAKTSGQPR 673
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 21.4 bits (43), Expect = 6.5
Identities = 10/20 (50%), Positives = 10/20 (50%), Gaps = 2/20 (10%)
Frame = +3
Query: 504 CDAHFTAFRRRHHC--RNCG 557
CD FRRRHH CG
Sbjct: 249 CDKCRGRFRRRHHLVHHKCG 268
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 240 PRTPPPLSTHYRTN 199
PR+ PPLST +N
Sbjct: 123 PRSTPPLSTPSNSN 136
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 240 PRTPPPLSTHYRTN 199
PR+ PPLST +N
Sbjct: 123 PRSTPPLSTPSNSN 136
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 240 PRTPPPLSTHYRTN 199
PR+ PPLST +N
Sbjct: 123 PRSTPPLSTPSNSN 136
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 240 PRTPPPLSTHYRTN 199
PR+ PPLST +N
Sbjct: 123 PRSTPPLSTPSNSN 136
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 240 PRTPPPLSTHYRTN 199
PR+ PPLST +N
Sbjct: 123 PRSTPPLSTPSNSN 136
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 240 PRTPPPLSTHYRTN 199
PR+ PPLST +N
Sbjct: 79 PRSTPPLSTPSNSN 92
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 240 PRTPPPLSTHYRTN 199
PR+ PPLST +N
Sbjct: 123 PRSTPPLSTPSNSN 136
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3
Query: 485 RYVRHPLRSSLHAGVRFTSHARSGT 411
R+ RH ++ H TSH GT
Sbjct: 268 RFTRHLIQRRTHTRHTTTSHNTRGT 292
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 240 PRTPPPLSTHYRTN 199
PR+ PPLST +N
Sbjct: 123 PRSTPPLSTPSNSN 136
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 240 PRTPPPLSTHYRTN 199
PR+ PPLST +N
Sbjct: 123 PRSTPPLSTPSNSN 136
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,662
Number of Sequences: 336
Number of extensions: 2443
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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