Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0215
(637 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1450 + 30246702-30247346,30248603-30248689,30248789-302489... 77 1e-14
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 71 6e-13
03_03_0266 - 16014740-16015045,16015566-16015601,16015623-160156... 71 1e-12
07_01_1100 + 10097044-10097949,10098074-10098274,10098796-100989... 69 3e-12
07_03_0982 + 23116343-23117089,23117227-23117313,23117424-231175... 69 4e-12
07_03_1275 + 25382959-25383765,25383850-25384050,25384693-253848... 67 1e-11
02_02_0181 + 7541831-7541971,7542407-7543279,7544101-7544301,754... 63 2e-10
07_03_1285 + 25477542-25477625,25477776-25477832,25477973-254780... 62 5e-10
03_05_0626 + 26233178-26233233,26234083-26234284,26234800-262349... 56 3e-08
05_04_0149 - 18441561-18442082,18442723-18442861,18443295-184433... 45 4e-05
04_04_0927 + 29467121-29467168,29467518-29467604,29468180-294682... 45 4e-05
05_06_0273 - 26851077-26851167,26851433-26851869,26852125-268522... 45 6e-05
02_05_0336 + 28033315-28033365,28033580-28033585,28033798-280338... 45 6e-05
01_07_0288 + 42534552-42534558,42535302-42537280,42537367-425375... 44 8e-05
01_07_0198 - 41918276-41918408,41918486-41918841,41919091-419192... 44 8e-05
01_06_0393 + 28968873-28968918,28969048-28969084,28969165-289693... 44 1e-04
05_01_0048 + 331155-333077,333208-333354,333540-334087,334481-33... 44 1e-04
04_04_1657 - 35102751-35102868,35102987-35103504,35104065-351042... 42 5e-04
01_07_0384 + 43209423-43210241 31 1.0
02_02_0435 + 10206569-10206730,10207126-10207230,10207897-102079... 30 1.8
08_02_1595 - 28114751-28114858,28115018-28115283,28116609-281167... 29 4.1
06_03_0551 - 22027441-22028224,22029015-22029344,22029510-220297... 28 5.4
04_03_0241 - 13243938-13244453,13244538-13246334 28 5.4
02_05_0202 + 26708049-26709074 28 5.4
02_05_0162 + 26398252-26399886 28 5.4
01_06_0536 + 30068881-30070383 28 5.4
12_01_0785 - 7171224-7171485,7172867-7173310,7175134-7175597 28 7.1
10_08_0154 + 15266430-15266953,15267748-15267820,15267893-152679... 28 7.1
09_03_0218 + 13539481-13540082,13540171-13540276,13540645-135409... 28 7.1
09_02_0366 + 7941550-7942161,7942230-7942775 28 7.1
07_03_1788 + 29523216-29524867,29525048-29525075 28 7.1
02_04_0563 - 23895573-23895614,23896330-23896390,23896901-238970... 28 7.1
09_03_0123 - 12512116-12512442,12512742-12512846,12512928-125130... 27 9.4
04_04_0994 + 29980076-29980441,29980900-29980998,29981075-299816... 27 9.4
>06_03_1450 +
30246702-30247346,30248603-30248689,30248789-30248920,
30249016-30249162,30250375-30250440,30250519-30250629,
30251551-30251584,30251667-30251743,30251829-30251906
Length = 458
Score = 77.0 bits (181), Expect = 1e-14
Identities = 30/56 (53%), Positives = 34/56 (60%)
Frame = +3
Query: 468 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
WVPD A C C A F+AF RRHHCRNCG +FC C+ PL +PVRVC
Sbjct: 337 WVPDEAVTKCTACTADFSAFNRRHHCRNCGDIFCDKCTQGRTPLTTDADAQPVRVC 392
>08_02_0864 +
21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 71.3 bits (167), Expect = 6e-13
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = +3
Query: 468 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIP 596
W+PD + C CDA FT RRHHCR+CG+VFCA C++NS+P
Sbjct: 61 WMPDQSCRVCYDCDAQFTILNRRHHCRHCGRVFCARCTANSVP 103
>03_03_0266 -
16014740-16015045,16015566-16015601,16015623-16015643,
16016331-16016591,16017504-16018985,16019834-16019989,
16020154-16020277,16020399-16020615,16020877-16021774,
16022947-16023291,16023371-16023565,16023751-16024453,
16024866-16025467
Length = 1781
Score = 70.5 bits (165), Expect = 1e-12
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +3
Query: 468 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIP 596
W+PD + C CD FT F RRHHCR CG++FC C++NSIP
Sbjct: 33 WMPDHSCRVCYDCDTQFTIFNRRHHCRRCGRIFCGKCTTNSIP 75
>07_01_1100 +
10097044-10097949,10098074-10098274,10098796-10098991,
10099697-10099881
Length = 495
Score = 68.9 bits (161), Expect = 3e-12
Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +3
Query: 462 PEWVPDIAAPACMRCDAHFTAFRR-RHHCRNCGKVFCASCSSNSIPLP-RYGQLKPVRVC 635
PEW+PD A +CM+C A FT R RHHCR CG +FC +CS LP ++ + P RVC
Sbjct: 180 PEWLPDSYANSCMQCAASFTVVTRGRHHCRFCGGIFCRTCSKGRCLLPAKFRERNPQRVC 239
>07_03_0982 +
23116343-23117089,23117227-23117313,23117424-23117555,
23118135-23118269,23118644-23118709,23118797-23118907,
23119237-23119329,23119555-23119659,23119752-23119829
Length = 517
Score = 68.5 bits (160), Expect = 4e-12
Identities = 28/56 (50%), Positives = 31/56 (55%)
Frame = +3
Query: 468 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
WVPD AA C C F+ F RRHHCRNCG++FC CS L VRVC
Sbjct: 367 WVPDEAAKKCYSCAVDFSPFNRRHHCRNCGEIFCDKCSQGRTALTAEDNAPLVRVC 422
>07_03_1275 +
25382959-25383765,25383850-25384050,25384693-25384888,
25385583-25385767
Length = 462
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Frame = +3
Query: 462 PEWVPDIAAPACMRCDAHFTAFRR-RHHCRNCGKVFCASCSSNSIPLP-RYGQLKPVRVC 635
PEW+PD + C++C FTA R RHHCR CG +FC CS +P ++ Q P RVC
Sbjct: 147 PEWLPDSSTSVCLQCSLPFTALTRGRHHCRFCGGIFCKDCSKGRCLMPMKFRQRDPQRVC 206
>02_02_0181 +
7541831-7541971,7542407-7543279,7544101-7544301,
7544358-7544595,7545732-7545922
Length = 547
Score = 62.9 bits (146), Expect = 2e-10
Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 468 WVPDIAAPACMRCDAHFTAFR-RRHHCRNCGKVFCASCS-SNSIPLPRYGQLKPVRVC 635
W+PD AA ACM C+ F RHHCR CG VFC CS S+ P++ +P RVC
Sbjct: 218 WLPDSAASACMLCNVRFHPIMCSRHHCRFCGGVFCGGCSKGRSLMPPKFNTSEPQRVC 275
>07_03_1285 +
25477542-25477625,25477776-25477832,25477973-25478040,
25478187-25478391,25478429-25478586,25478865-25478940,
25479065-25479124,25479186-25479236,25479663-25479741,
25480183-25480271
Length = 308
Score = 61.7 bits (143), Expect = 5e-10
Identities = 26/47 (55%), Positives = 29/47 (61%)
Frame = +3
Query: 495 CMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
C C FT FRRRHHCRNCG+ C SS + LP+YG VRVC
Sbjct: 15 CDVCRCTFTTFRRRHHCRNCGRTLCHEHSSYHMALPQYGIYTDVRVC 61
>03_05_0626 +
26233178-26233233,26234083-26234284,26234800-26234968,
26235767-26238768
Length = 1142
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = +3
Query: 468 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
WV D A C C F+ F R+HHC+ CG +FC++C+ + L G PVR+C
Sbjct: 66 WVVD--ATHCQGCSVQFSLFTRKHHCQRCGGLFCSNCTQQRMVLRGQGD-SPVRIC 118
>05_04_0149 -
18441561-18442082,18442723-18442861,18443295-18443352,
18443630-18443664,18444528-18444886,18445304-18445450,
18445849-18447954,18448300-18448494,18448629-18448709,
18448758-18448874,18449281-18449370,18449466-18449552,
18450293-18450315,18450675-18450804
Length = 1362
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 465 EWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSS-NSIPLP-RYGQLKPVRVC 635
+WV + C C F R+RH+C NC VFC +CSS S+ KP RVC
Sbjct: 724 KWVSGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHACSSKKSLKASLAPNPNKPYRVC 782
>04_04_0927 +
29467121-29467168,29467518-29467604,29468180-29468269,
29468547-29468741,29469056-29471080,29471208-29471354,
29471520-29471923,29472015-29472144
Length = 1041
Score = 45.2 bits (102), Expect = 4e-05
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 495 CMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPL 599
C C F R+ H+C NCG +FC+SC+SN I +
Sbjct: 616 CSSCQMVFGFTRKEHNCYNCGSMFCSSCTSNKITM 650
>05_06_0273 -
26851077-26851167,26851433-26851869,26852125-26852271,
26852352-26854415,26854792-26854908,26855007-26855093,
26855350-26855439,26855523-26855609,26856736-26856810
Length = 1064
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 465 EWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQL--KPVRVC 635
+WV C C F R+RH+C NCG V C +CSS + KP RVC
Sbjct: 619 KWVSGADQSVCSGCRQPFGFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVC 677
>02_05_0336 +
28033315-28033365,28033580-28033585,28033798-28033884,
28034741-28034830,28035736-28037778,28037916-28038062,
28038148-28038560,28038656-28038755
Length = 978
Score = 44.8 bits (101), Expect = 6e-05
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 495 CMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSI 593
C C F R++H+C NCG +FC SCS+N +
Sbjct: 559 CSNCQLTFGFTRKKHNCYNCGSMFCNSCSNNKV 591
>01_07_0288 +
42534552-42534558,42535302-42537280,42537367-42537513,
42537982-42538526,42538906-42538981,42539357-42539437
Length = 944
Score = 44.4 bits (100), Expect = 8e-05
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +3
Query: 465 EWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRY--GQLKPVRVC 635
+WV C C F R+RH+C NCG V C +C+S KP RVC
Sbjct: 446 KWVSGAEQSQCASCRQPFGFTRKRHNCHNCGLVHCNACTSRKAVRAALAPNPAKPYRVC 504
>01_07_0198 -
41918276-41918408,41918486-41918841,41919091-41919237,
41919666-41921789,41922150-41922344,41922488-41922568,
41923325-41923414,41923507-41923593,41923914-41923961
Length = 1086
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/59 (40%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 465 EWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSS-NSIPLP-RYGQLKPVRVC 635
+WV C C F R+RH+C NC VFC SCSS S+ KP RVC
Sbjct: 650 KWVSGSDQSMCSGCRQPFNLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNPNKPYRVC 708
>01_06_0393 +
28968873-28968918,28969048-28969084,28969165-28969384,
28969557-28969715,28969831-28969950,28972154-28972240,
28972329-28972418,28972516-28972602,28972761-28972877,
28972945-28973028,28973585-28975324,28975670-28975816,
28975998-28976431,28976523-28976667
Length = 1170
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +3
Query: 465 EWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQL--KPVRVC 635
+WV C C F R+RH C NCG V C +CSS + KP RVC
Sbjct: 816 KWVSGADQSVCTGCRQAFGFTRKRHDCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVC 874
>05_01_0048 +
331155-333077,333208-333354,333540-334087,334481-334616
Length = 917
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +3
Query: 465 EWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSS----NSIPLPRYGQLKPVRV 632
+WV C C F R+RH+C NCG V C +C+S + P G KP RV
Sbjct: 422 KWVSGADQSQCSSCQQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPG--KPYRV 479
Query: 633 C 635
C
Sbjct: 480 C 480
>04_04_1657 -
35102751-35102868,35102987-35103504,35104065-35104211,
35104289-35106262,35106964-35107089,35107178-35107264,
35107335-35107424,35107725-35107811,35108248-35108300,
35109339-35109387
Length = 1082
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/51 (45%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +3
Query: 495 CMRCDAHFTAFRRRHHCRNCGKVFCASCSS----NSIPLPRYGQLKPVRVC 635
C C F R+RH+C NCG V C SCSS + P G KP RVC
Sbjct: 639 CSSCRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPG--KPYRVC 687
>01_07_0384 + 43209423-43210241
Length = 272
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 495 CMRCDAHFTAFRRRHHCRNCGKVFCASC 578
C C+++ FR H C CG+V+C C
Sbjct: 107 CALCNSYIYLFR--HRCLVCGRVYCRRC 132
>02_02_0435 +
10206569-10206730,10207126-10207230,10207897-10207986,
10208256-10208369,10208477-10208530,10208951-10209067,
10209530-10209639,10209752-10209825,10209921-10209982,
10210240-10210435,10210506-10210569,10210789-10210832,
10210974-10211116,10211521-10211751
Length = 521
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -3
Query: 503 PHAGGRRYVRHPLRSSLHAGVRFTSHARSGTA-FFPIRQITSRYGGLQIDVVHRLPSRFT 327
P A P R LH V SG A F+ ++ + G Q+D++ RLP+ F
Sbjct: 21 PRAFSSAAAAAPSREPLHVCV-----VGSGPAGFYTADKMLKGHEGAQVDIIDRLPTPF- 74
Query: 326 GRVRRGAA 303
G VR G A
Sbjct: 75 GLVRSGVA 82
>08_02_1595 -
28114751-28114858,28115018-28115283,28116609-28116703,
28117179-28118154,28118245-28118369,28118443-28118569,
28118606-28118843
Length = 644
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/77 (27%), Positives = 33/77 (42%)
Frame = -3
Query: 572 RAEHFTTVPTVMSSSKSGKVRVAPHAGGRRYVRHPLRSSLHAGVRFTSHARSGTAFFPIR 393
+ H + P S S S +V V + R++ HP + + R FFP
Sbjct: 29 KTHHLRSPPPPPSPSSSKRVAVVYYLCRNRHLEHPHFIEVPLASPDGLYLRV-FFFFPFS 87
Query: 392 QITSRYGGLQIDVVHRL 342
T+ GG+ DV++RL
Sbjct: 88 IPTNDAGGVDADVINRL 104
>06_03_0551 -
22027441-22028224,22029015-22029344,22029510-22029778,
22030530-22031453,22037761-22038360,22040049-22040267
Length = 1041
Score = 28.3 bits (60), Expect = 5.4
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = -3
Query: 398 IRQITSRYGGL---QIDVVHRLPSRFTGRVR--RGAAHGLALDHSRTAIGLRRIGC 246
++ I SR GGL +ID + LP+ + R R R AAH R+ LRRI C
Sbjct: 569 VKAILSRSGGLPQRRIDCLPFLPTPESRRRRPERAAAHEDRTARRRSRCPLRRISC 624
>04_03_0241 - 13243938-13244453,13244538-13246334
Length = 770
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +2
Query: 2 VRVHRGGRGSAADELRGRPQE----HPEVRLPDEPVAGHDGDARTSGEXRREIAHHR 160
VR R GRG +E R +E HP ++ HDGD G RR++A R
Sbjct: 345 VRDGRRGRGGRRNERPWRRREYNDDHPSF-FDNQRRRDHDGDDDNDGRGRRDLARGR 400
>02_05_0202 + 26708049-26709074
Length = 341
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 RGGRGSA-ADELRGRPQEHPEVRLPDEPVAGHDGDAR 121
RGGRG A + PQ HP+ LP+ D D +
Sbjct: 222 RGGRGGCCAPPVAPPPQPHPQPPLPEHDAGEEDMDGK 258
>02_05_0162 + 26398252-26399886
Length = 544
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 474 APTPELAPRWRSLH*PRSQWDGVL 403
+P +APRWRSLH W G+L
Sbjct: 159 SPRSTIAPRWRSLH-GEDGWAGLL 181
>01_06_0536 + 30068881-30070383
Length = 500
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 596 WYRVRTTRRAEHFTTVPTVMSSSKSGKVR 510
W R+ R EH T V ++ +S+S K+R
Sbjct: 277 WARILHNLRGEHITPVSKIILTSRSDKIR 305
>12_01_0785 - 7171224-7171485,7172867-7173310,7175134-7175597
Length = 389
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 492 ACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPL 599
A +C+ H F+ RH + FC+ SNSIPL
Sbjct: 256 AAHQCEIH--RFQSRHDDAKWARGFCSLTCSNSIPL 289
>10_08_0154 +
15266430-15266953,15267748-15267820,15267893-15267949,
15268248-15268303,15269584-15269797,15270497-15270538,
15270661-15270735,15270820-15270903,15271880-15271944,
15272436-15272655,15272820-15272908,15273326-15273440,
15273519-15273554
Length = 549
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 221 SGGGVRGQYIRFDAVR*QFENDPTRDRERHRGGPGR*NEKEVDGQRQ 361
S GG R R + R + D RDR+RHRGG G ++ D ++
Sbjct: 35 SSGGGRDDEER-GSKRSRSGEDRDRDRDRHRGGGGGREHRDRDDGKE 80
>09_03_0218 +
13539481-13540082,13540171-13540276,13540645-13540960,
13541187-13541263,13541269-13541895,13542783-13543112,
13543442-13543747,13543824-13543896,13544004-13544089,
13544219-13544396,13545311-13545756
Length = 1048
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +3
Query: 543 CRNCG-KVFCASCSSNSIP 596
C+ CG KVFCA+C N P
Sbjct: 185 CQLCGDKVFCAACIKNKYP 203
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +3
Query: 492 ACMRCDAHFTAFRR-RHHCRNCGKVFCASCSSN 587
AC RC F R H +NCGK++ C S+
Sbjct: 280 ACRRCGKRFAVRGDWRTHEKNCGKLWFCVCGSD 312
>07_03_1788 + 29523216-29524867,29525048-29525075
Length = 559
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2
Query: 5 RVHRGGRGSAADELRGRPQEHPEVRLPDEPVAGHDGD 115
RV +GGRGS A RGRP+ P P D D
Sbjct: 272 RVSKGGRGSGAP--RGRPRGRPRKNNAGRPAHLKDED 306
>02_04_0563 -
23895573-23895614,23896330-23896390,23896901-23897025,
23897217-23897302,23898052-23898167,23898274-23898336,
23898451-23898530,23898751-23898871,23899419-23899501,
23900081-23900155,23900436-23900936
Length = 450
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 165 ELSED--QVIQNHSSFDSVYSAEEVYAXXXXXXXXXXXXXRMIQRETVSGTAA 317
++SED Q+ Q S F+SVY+A E+Y +I E + GT A
Sbjct: 330 KVSEDNPQMDQTTSKFNSVYTAPEMYRNGTFDRSVDVFAFGLILYEMIEGTHA 382
>09_03_0123 -
12512116-12512442,12512742-12512846,12512928-12513091,
12513282-12513480,12514368-12514585,12514674-12514743
Length = 360
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 323 RVRRGAAHGLALDHSRTAIGL 261
R+ GAA GLA HS TA+G+
Sbjct: 176 RIALGAARGLAYLHSTTAVGV 196
>04_04_0994 +
29980076-29980441,29980900-29980998,29981075-29981612,
29982211-29982494,29983014-29983034,29983238-29983452,
29983538-29983691,29984089-29984220
Length = 602
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +3
Query: 495 CMRCDA--HFTAFRRRHHCRNCGKVFCASCSS 584
C RC H + C NCG+ FC C+S
Sbjct: 468 CPRCKMAIHKIEGCNKMSCSNCGQYFCYQCNS 499
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,110,071
Number of Sequences: 37544
Number of extensions: 327140
Number of successful extensions: 1067
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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