Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0215
(637 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral signa... 76 2e-14
U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte grow... 72 3e-13
Z67879-6|CAA91791.2| 1482|Caenorhabditis elegans Hypothetical pr... 70 1e-12
AL023817-1|CAA19436.2| 1482|Caenorhabditis elegans Hypothetical ... 70 1e-12
Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical pr... 66 3e-11
AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical ... 66 3e-11
Z22181-10|CAA80187.1| 266|Caenorhabditis elegans Hypothetical p... 65 5e-11
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 65 5e-11
U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor... 63 1e-10
Z92831-2|CAB07368.2| 861|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 55 5e-08
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 55 5e-08
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 55 5e-08
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor... 54 9e-08
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch... 54 9e-08
AC024777-3|AAF60562.3| 563|Caenorhabditis elegans Hypothetical ... 52 5e-07
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 50 1e-06
U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab e... 46 3e-05
Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z49072-1|CAA88884.1| 938|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF031519-1|AAC78763.1| 930|Caenorhabditis elegans myotubularin ... 43 2e-04
Z47808-2|CAA87770.1| 415|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z81546-10|CAH10812.1| 674|Caenorhabditis elegans Hypothetical p... 33 0.23
Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z81546-8|CAB04456.1| 676|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z75547-11|CAA99905.4| 394|Caenorhabditis elegans Hypothetical p... 33 0.23
AY313179-1|AAP79304.1| 782|Caenorhabditis elegans myotubularin-... 33 0.23
AY313177-1|AAP79302.1| 676|Caenorhabditis elegans myotubularin-... 33 0.23
AL117206-4|CAB60447.1| 447|Caenorhabditis elegans Hypothetical ... 29 3.7
Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical pr... 28 4.9
AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical ... 28 4.9
AL032637-20|CAA21612.2| 250|Caenorhabditis elegans Hypothetical... 28 4.9
AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical ... 28 4.9
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 6.4
U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical pr... 27 8.5
>AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral
signaling target protein 2 protein.
Length = 661
Score = 75.8 bits (178), Expect = 2e-14
Identities = 29/56 (51%), Positives = 35/56 (62%)
Frame = +3
Query: 468 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
WVPD C C F RRRHHCRNCG++FC CS N+I +P +G + VRVC
Sbjct: 563 WVPDEDCEQCTACSMPFNFVRRRHHCRNCGRIFCHKCSCNTISIPEHGYDRKVRVC 618
Score = 44.0 bits (99), Expect = 9e-05
Identities = 17/26 (65%), Positives = 24/26 (92%)
Frame = +3
Query: 3 FVCIAGVADQLQTNFAADLRNILKSV 80
FVCIAGVADQLQTN+++++R +LK +
Sbjct: 493 FVCIAGVADQLQTNYSSEIRKVLKLI 518
>U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte growth
factor-regulatedtk substrate (hrs) family protein 1
protein.
Length = 729
Score = 72.1 bits (169), Expect = 3e-13
Identities = 29/58 (50%), Positives = 37/58 (63%)
Frame = +3
Query: 462 PEWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
PEW P C RC + F+ F R+HHCR CG++FC CSS + LP++G K VRVC
Sbjct: 155 PEWAD---GPECYRCRSVFSVFTRKHHCRACGQIFCDKCSSRELALPQFGIEKEVRVC 209
>Z67879-6|CAA91791.2| 1482|Caenorhabditis elegans Hypothetical
protein VF11C1L.1 protein.
Length = 1482
Score = 70.1 bits (164), Expect = 1e-12
Identities = 26/56 (46%), Positives = 35/56 (62%)
Frame = +3
Query: 468 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
W+PD C +C+ FT FRRRHHCR CG++FCA C S+ I G + +R+C
Sbjct: 107 WMPDSTGRECYQCEERFTTFRRRHHCRLCGQIFCAKCCSSHIDGAALGYMGELRLC 162
>AL023817-1|CAA19436.2| 1482|Caenorhabditis elegans Hypothetical
protein VF11C1L.1 protein.
Length = 1482
Score = 70.1 bits (164), Expect = 1e-12
Identities = 26/56 (46%), Positives = 35/56 (62%)
Frame = +3
Query: 468 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
W+PD C +C+ FT FRRRHHCR CG++FCA C S+ I G + +R+C
Sbjct: 107 WMPDSTGRECYQCEERFTTFRRRHHCRLCGQIFCAKCCSSHIDGAALGYMGELRLC 162
>Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical protein
VT23B5.2 protein.
Length = 931
Score = 65.7 bits (153), Expect = 3e-11
Identities = 25/56 (44%), Positives = 34/56 (60%)
Frame = +3
Query: 468 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
WV D+ C C+ FT R+HHCRNCG++FC++CS + R +PVRVC
Sbjct: 860 WVQDVTRQRCDDCEHKFTLADRKHHCRNCGQIFCSTCSRFESHITRMNISRPVRVC 915
>AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical
protein VT23B5.2 protein.
Length = 931
Score = 65.7 bits (153), Expect = 3e-11
Identities = 25/56 (44%), Positives = 34/56 (60%)
Frame = +3
Query: 468 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
WV D+ C C+ FT R+HHCRNCG++FC++CS + R +PVRVC
Sbjct: 860 WVQDVTRQRCDDCEHKFTLADRKHHCRNCGQIFCSTCSRFESHITRMNISRPVRVC 915
>Z22181-10|CAA80187.1| 266|Caenorhabditis elegans Hypothetical
protein ZK632.12 protein.
Length = 266
Score = 64.9 bits (151), Expect = 5e-11
Identities = 29/57 (50%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 468 WVPDIAAPACMRCD-AHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
WVPD A CM C F +RRHHCRNCG+V C +CSS + + + KPVRVC
Sbjct: 149 WVPDGEAVKCMVCGKTQFNLVQRRHHCRNCGRVVCGACSSRTFRIDNVHK-KPVRVC 204
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 64.9 bits (151), Expect = 5e-11
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +3
Query: 363 LQASVSTGDLTYREERRPTXXXXXXXXXXXXXXPEWVPDIAAPACMRCDAHFTAFRRRHH 542
L S S T R ERR T P W+PD P CM C+ FT RRHH
Sbjct: 507 LHESDSDESATPRRERRLTESELQLGKTS----PYWIPDSECPNCMLCNTRFTIITRRHH 562
Query: 543 CRNCGKVFCASCSSNSI---PLPRYG-QLKPVRVC 635
CR CG+V C SC + L G +L+ VRVC
Sbjct: 563 CRACGRVLCGSCCNEKAFLEYLQEEGKKLQAVRVC 597
>U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor
protein protein1, isoform c protein.
Length = 605
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/72 (43%), Positives = 34/72 (47%)
Frame = +3
Query: 363 LQASVSTGDLTYREERRPTXXXXXXXXXXXXXXPEWVPDIAAPACMRCDAHFTAFRRRHH 542
L S S T R ERR T P W+PD P CM C+ FT RRHH
Sbjct: 507 LHESDSDESATPRRERRLTESELQLGKTS----PYWIPDSECPNCMLCNTRFTIITRRHH 562
Query: 543 CRNCGKVFCASC 578
CR CG+V C SC
Sbjct: 563 CRACGRVLCGSC 574
>Z92831-2|CAB07368.2| 861|Caenorhabditis elegans Hypothetical
protein F22G12.4 protein.
Length = 861
Score = 59.7 bits (138), Expect = 2e-09
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = +3
Query: 504 CDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
C A F+ R+HHCR+CG+ C+ CS ++P+ +YG+ K VRVC
Sbjct: 803 CGARFSLTSRKHHCRHCGRHVCSKCSETTMPIAKYGEEKRVRVC 846
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 54.8 bits (126), Expect = 5e-08
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = +3
Query: 465 EWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
+W+ D A C C F+ R+HHCR CGK++C CSS S+ + PVR C
Sbjct: 1140 KWLDDAEAINCTECGKVFSLTVRKHHCRVCGKIYCNPCSSKSVRIA--SAKNPVRAC 1194
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 54.8 bits (126), Expect = 5e-08
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = +3
Query: 465 EWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
+W+ D A C C F+ R+HHCR CGK++C CSS S+ + PVR C
Sbjct: 1142 KWLDDAEAINCTECGKVFSLTVRKHHCRVCGKIYCNPCSSKSVRIA--SAKNPVRAC 1196
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 54.8 bits (126), Expect = 5e-08
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = +3
Query: 465 EWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
+W+ D A C C F+ R+HHCR CGK++C CSS S+ + PVR C
Sbjct: 1142 KWLDDAEAINCTECGKVFSLTVRKHHCRVCGKIYCNPCSSKSVRIA--SAKNPVRAC 1196
>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein1, isoform a protein.
Length = 1280
Score = 54.0 bits (124), Expect = 9e-08
Identities = 37/95 (38%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = +3
Query: 363 LQASVSTGDLTYREERRPTXXXXXXXXXXXXXXPEWVPDIAAPACMRCDAHFTAFRRRHH 542
L S S T R ERR T P W+PD P CM FT RRHH
Sbjct: 507 LHESDSDESATPRRERRLTESELQLGKTS----PYWIPDSECPNCML----FTIITRRHH 558
Query: 543 CRNCGKVFCASCSSNSI---PLPRYG-QLKPVRVC 635
CR CG+V C SC + L G +L+ VRVC
Sbjct: 559 CRACGRVLCGSCCNEKAFLEYLQEEGKKLQAVRVC 593
>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein.
Length = 1280
Score = 54.0 bits (124), Expect = 9e-08
Identities = 37/95 (38%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = +3
Query: 363 LQASVSTGDLTYREERRPTXXXXXXXXXXXXXXPEWVPDIAAPACMRCDAHFTAFRRRHH 542
L S S T R ERR T P W+PD P CM FT RRHH
Sbjct: 507 LHESDSDESATPRRERRLTESELQLGKTS----PYWIPDSECPNCML----FTIITRRHH 558
Query: 543 CRNCGKVFCASCSSNSI---PLPRYG-QLKPVRVC 635
CR CG+V C SC + L G +L+ VRVC
Sbjct: 559 CRACGRVLCGSCCNEKAFLEYLQEEGKKLQAVRVC 593
>AC024777-3|AAF60562.3| 563|Caenorhabditis elegans Hypothetical
protein Y42H9AR.3 protein.
Length = 563
Score = 51.6 bits (118), Expect = 5e-07
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = +3
Query: 468 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCS 581
W+ D A C C + F RRRHHCR CG+V C SCS
Sbjct: 176 WLDDAEAVCCPLCASRFGLTRRRHHCRLCGRVLCHSCS 213
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 462 PEWVPDIAAPACMR--CDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
P W+PD + C+ C F RRHHCR+CG + C C + PL +Y K VC
Sbjct: 771 PVWLPDNISNECLMEGCSTEFNIINRRHHCRDCGWLICKFCKGQA-PLSKYDFTKQ-NVC 828
>U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab
effector) protein 5 protein.
Length = 414
Score = 45.6 bits (103), Expect = 3e-05
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 468 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPL-PRYGQLKPVRVC 635
W D C CD F + + HC +CG++FC +C +++P P + +VC
Sbjct: 341 WQWDDDVDQCSNCDTSFARVKVKPHCLHCGRIFCMNCLKDTVPSGPNHRPANVCKVC 397
>Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical
protein T24A11.1b protein.
Length = 1006
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 531 RRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
R+HHCRNCG+V C CS N + G+ R C
Sbjct: 841 RQHHCRNCGRVVCEDCSKNRFSVIEEGKSVQKRAC 875
>Z49072-1|CAA88884.1| 938|Caenorhabditis elegans Hypothetical
protein T24A11.1a protein.
Length = 938
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 531 RRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
R+HHCRNCG+V C CS N + G+ R C
Sbjct: 814 RQHHCRNCGRVVCEDCSKNRFSVIEEGKSVQKRAC 848
>AF031519-1|AAC78763.1| 930|Caenorhabditis elegans myotubularin
homologous protein 1 protein.
Length = 930
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 531 RRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
R+HHCRNCG+V C CS N + G+ R C
Sbjct: 841 RQHHCRNCGRVVCEDCSKNRFSVIEEGKSVQKRAC 875
>Z47808-2|CAA87770.1| 415|Caenorhabditis elegans Hypothetical
protein D2013.2 protein.
Length = 415
Score = 42.3 bits (95), Expect = 3e-04
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 531 RRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
R+HHCR CG C SC N P G +R+C
Sbjct: 315 RQHHCRTCGSAVCGSCCDNWTTYPPMGYETKIRIC 349
>Z81546-10|CAH10812.1| 674|Caenorhabditis elegans Hypothetical
protein F53A2.8c protein.
Length = 674
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +3
Query: 465 EWVPDIAAPACMR--CDAHFTA-FRRRHHCRNCGKVFCASC 578
+W P A C C F++ RR HC CG +FC C
Sbjct: 616 KWQPLRGADRCSNPACRGEFSSTIERRIHCHLCGMIFCRRC 656
>Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical
protein F53A2.8b protein.
Length = 782
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +3
Query: 465 EWVPDIAAPACMR--CDAHFTA-FRRRHHCRNCGKVFCASC 578
+W P A C C F++ RR HC CG +FC C
Sbjct: 724 KWQPLRGADRCSNPACRGEFSSTIERRIHCHLCGMIFCRRC 764
>Z81546-8|CAB04456.1| 676|Caenorhabditis elegans Hypothetical
protein F53A2.8a protein.
Length = 676
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +3
Query: 465 EWVPDIAAPACMR--CDAHFTA-FRRRHHCRNCGKVFCASC 578
+W P A C C F++ RR HC CG +FC C
Sbjct: 618 KWQPLRGADRCSNPACRGEFSSTIERRIHCHLCGMIFCRRC 658
>Z75547-11|CAA99905.4| 394|Caenorhabditis elegans Hypothetical
protein R11D1.10a protein.
Length = 394
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +3
Query: 495 CMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVC 635
C C ++ R C NC FC C + +P L P+ VC
Sbjct: 7 CTNCRTKYSLLNREAGCSNCALSFCKKCLPHRAIIPTLSDL-PMIVC 52
>AY313179-1|AAP79304.1| 782|Caenorhabditis elegans
myotubularin-related protein MTM-6B protein.
Length = 782
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +3
Query: 465 EWVPDIAAPACMR--CDAHFTA-FRRRHHCRNCGKVFCASC 578
+W P A C C F++ RR HC CG +FC C
Sbjct: 724 KWQPLRGADRCSNPACRGEFSSTIERRIHCHLCGMIFCRRC 764
>AY313177-1|AAP79302.1| 676|Caenorhabditis elegans
myotubularin-related protein MTM-6A protein.
Length = 676
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +3
Query: 465 EWVPDIAAPACMR--CDAHFTA-FRRRHHCRNCGKVFCASC 578
+W P A C C F++ RR HC CG +FC C
Sbjct: 618 KWQPLRGADRCSNPACRGEFSSTIERRIHCHLCGMIFCRRC 658
>AL117206-4|CAB60447.1| 447|Caenorhabditis elegans Hypothetical
protein Y67A10A.6 protein.
Length = 447
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 495 CMRCDAHFTAFRRRHHCRNCGKVFCASCS 581
C C H + HHC+ GK C SCS
Sbjct: 248 CYMC--HGRGIKECHHCKGGGKKPCTSCS 274
>Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical protein
Y48E1A.1a protein.
Length = 1737
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 5 RVHRGGRGSAADELRGRPQEHPEVRLPDEPVAGHDGDARTSG 130
R+HR R AD G +E EVR +EP+ D + G
Sbjct: 1439 RLHRRHRDEGAD-YEGEDEERVEVREEEEPMDSDSEDVKKEG 1479
>Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical protein
Y48E1A.1a protein.
Length = 1737
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 5 RVHRGGRGSAADELRGRPQEHPEVRLPDEPVAGHDGDARTSG 130
R+HR R AD G +E EVR +EP+ D + G
Sbjct: 1439 RLHRRHRDEGAD-YEGEDEERVEVREEEEPMDSDSEDVKKEG 1479
>AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical
protein Y48E1A.1a protein.
Length = 1737
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 5 RVHRGGRGSAADELRGRPQEHPEVRLPDEPVAGHDGDARTSG 130
R+HR R AD G +E EVR +EP+ D + G
Sbjct: 1439 RLHRRHRDEGAD-YEGEDEERVEVREEEEPMDSDSEDVKKEG 1479
>AL032637-20|CAA21612.2| 250|Caenorhabditis elegans Hypothetical
protein Y43F8C.10 protein.
Length = 250
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +3
Query: 474 PDIAAPACMRCDAHFTAFRRRHHCRNC--GKVFCASC 578
P P C RC H R + H R C FCA C
Sbjct: 110 PKERRPNCQRCAQHSVVNRLKGHKRACPFRDCFCAKC 146
>AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical
protein W03F9.10 protein.
Length = 602
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 349 WTTSICRPPYLLVI*RIGKNAVPL-RAWLVKRTPAWSELRSGCRT*RRPP 495
W R PYLLV + +N+VP+ R W KR + +G R RPP
Sbjct: 175 WADVTSRDPYLLVAMKSYRNSVPVPRHWNAKR-----KYLAGKRGFERPP 219
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 27.9 bits (59), Expect = 6.4
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -3
Query: 578 TRRAEHFTTVPTVMSSSKSGKVRVAPHAGGRRYVRHPLRSSLHAGVRFTSHARSGTA 408
T A +T PT+ +S SG VAP A V L+SS +G T + S TA
Sbjct: 480 TSPATQQSTKPTIGTSMSSGPTTVAPGASTESTV---LQSSTPSGTTVTLPSGSSTA 533
>U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical
protein C28G1.6 protein.
Length = 295
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +3
Query: 489 PACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLP 602
P C C+ + + R NCG V C C+S P
Sbjct: 4 PTCEICEESYRSESRIPKNLNCGHVICPVCASKLFENP 41
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,713,801
Number of Sequences: 27780
Number of extensions: 239574
Number of successful extensions: 764
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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