BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0213 (693 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical ... 37 0.012 Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical pr... 36 0.036 Z83113-3|CAB05545.1| 479|Caenorhabditis elegans Hypothetical pr... 34 0.084 AF047651-6|AAC02725.3| 426|Caenorhabditis elegans Hypothetical ... 32 0.34 U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 32 0.45 U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical pr... 31 0.59 Z81122-5|CAB03357.1| 579|Caenorhabditis elegans Hypothetical pr... 31 0.78 AF022974-3|AAC48037.1| 346|Caenorhabditis elegans Seven tm rece... 31 0.78 AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical... 29 2.4 Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical pr... 29 3.2 Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical p... 29 3.2 Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical pr... 29 3.2 Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical p... 29 3.2 AF039042-11|AAC48251.1| 343|Caenorhabditis elegans Serpentine r... 29 3.2 Z81544-6|CAI46607.1| 376|Caenorhabditis elegans Hypothetical pr... 29 4.2 Z81508-6|CAB04147.1| 338|Caenorhabditis elegans Hypothetical pr... 29 4.2 U53151-1|AAB37069.1| 226|Caenorhabditis elegans Clathrin light ... 29 4.2 U39645-7|AAA80364.1| 190|Caenorhabditis elegans Hypothetical pr... 29 4.2 Z78418-4|CAB01698.1| 710|Caenorhabditis elegans Hypothetical pr... 28 5.5 AL021497-8|CAA16409.1| 334|Caenorhabditis elegans Hypothetical ... 28 7.3 >AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical protein C35A11.4 protein. Length = 515 Score = 37.1 bits (82), Expect = 0.012 Identities = 45/209 (21%), Positives = 87/209 (41%), Gaps = 4/209 (1%) Frame = +1 Query: 1 GLVLCFLPESPYYYLKFERSDRAERSLRSLRSGDIRTELKSIELNVQEDMKNRGS---WS 171 G L F PESP + ++ ++ A +S+ + +I K + ++E+ KN Sbjct: 199 GAALPFFPESPGFLIQRGATEAATKSIAYYYNCEIDEAEKHLN-EIKEEQKNSTKNFKMM 257 Query: 172 DLFTEATNKKAMWITLGVFTVQQFCGSAAVVAYSQFIFNCTTGPTILPNGTLEETTRKSI 351 D+ + + + +I + V F G A + A++ I L++T K + Sbjct: 258 DIVRKKSLRDKAFIGVVVTFAMSFSGVAVINAFAFDI--------------LKDTGLKVL 303 Query: 352 EPYQESIIIGCVQVATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTI-GTYFYFYDTNKQ 528 E + I V + + I++ ++VDR GR+P N I F FY Sbjct: 304 EASLANDAISVVSMISSIVAAVIVDRNGRRPLLLISFAGILVCNLIIFALMFTFYKFENH 363 Query: 529 AVQNVSWILLVALIVYIVCYAIGLSTVPY 615 + +IL+ + ++ +A+G + Y Sbjct: 364 V---LGFILICFICIFTFFFALGPGPLCY 389 >Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical protein K08F9.1 protein. Length = 490 Score = 35.5 bits (78), Expect = 0.036 Identities = 42/207 (20%), Positives = 83/207 (40%), Gaps = 2/207 (0%) Frame = +1 Query: 1 GLVLCFLPESPYYYLKFERSDRAERSLRSLRSGDIRTELKSIELNVQEDMKNRGSWS--D 174 G L F PESP Y ++ + A S+ + K ++ +E M + ++ D Sbjct: 199 GAALPFFPESPGYLIQKGSLESATISISFYYKCEKEEADKHVKEIQKEQMNSTKKFTMLD 258 Query: 175 LFTEATNKKAMWITLGVFTVQQFCGSAAVVAYSQFIFNCTTGPTILPNGTLEETTRKSIE 354 + + + + ++ V V F G A + A++ F TG +L + T Sbjct: 259 VIQQKSLRDKAFVGAVVTFVMSFSGVAVISAFA-FEILVNTGLNVLQASLANDATT---- 313 Query: 355 PYQESIIIGCVQVATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTIGTYFYFYDTNKQAV 534 V V + +L++ ++D+ GR+P N I + +D K Sbjct: 314 ---------IVSVISSVLAIAIIDKNGRRPLLLISLAGILICNLIIFGLMFTFD--KFGN 362 Query: 535 QNVSWILLVALIVYIVCYAIGLSTVPY 615 Q + +IL+ + ++ +A+G + Y Sbjct: 363 QVLGFILIFFICIFQFFFALGPGPLSY 389 >Z83113-3|CAB05545.1| 479|Caenorhabditis elegans Hypothetical protein K08H10.6 protein. Length = 479 Score = 34.3 bits (75), Expect = 0.084 Identities = 16/82 (19%), Positives = 41/82 (50%) Frame = +1 Query: 391 VATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTIGTYFYFYDTNKQAVQNVSWILLVALI 570 + + +L+ + +D++GR+P +N + + + YD+ K + ++W L + Sbjct: 327 IVSALLAAIAMDKIGRRPLLITSLLVLALINIFMMSLVFLYDSTKDSF--LAWPFLALFV 384 Query: 571 VYIVCYAIGLSTVPYVTIGGDV 636 ++ ++IG+ V IG ++ Sbjct: 385 LFTFVFSIGIGPAA-VFIGAEL 405 >AF047651-6|AAC02725.3| 426|Caenorhabditis elegans Hypothetical protein C05D2.8 protein. Length = 426 Score = 32.3 bits (70), Expect = 0.34 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +1 Query: 46 KFERSDRAERSLRSLRSGDIRTELKSIELNVQEDMKNRGSWSDLFTEATNKKAMWITLG 222 K + D E + S GD E +E+ + DMK S +F +A+N+ +ITLG Sbjct: 60 KSHKEDNKENLMNSQWGGD-GGERDIVEMEKKHDMKQDWSADAVFFDASNRDGWYITLG 117 >U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily assigned gene nameprotein 77 protein. Length = 1004 Score = 31.9 bits (69), Expect = 0.45 Identities = 20/53 (37%), Positives = 28/53 (52%) Frame = +1 Query: 31 PYYYLKFERSDRAERSLRSLRSGDIRTELKSIELNVQEDMKNRGSWSDLFTEA 189 P Y+KFER + ER +R IR+ +KS L + K R W+D T+A Sbjct: 624 PLEYMKFERMEEDER----IRCLQIRSRVKS-ALIIFSSEKERNQWTDDLTKA 671 >U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical protein F53H8.3 protein. Length = 569 Score = 31.5 bits (68), Expect = 0.59 Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 1/154 (0%) Frame = +1 Query: 160 GSWSDLFTEATNKKAMWITLGVFTVQQFCGSAAVVAYSQFIF-NCTTGPTILPNGTLEET 336 G++ +LFT + + +++ V QQF G AV A+S +F N P I TL Sbjct: 309 GTFRELFTRPDLRIPLAVSIIVMIAQQFTGCTAVFAFSTDMFLNAGLTPVIARFSTL--- 365 Query: 337 TRKSIEPYQESIIIGCVQVATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTIGTYFYFYD 516 IG V S L+ +VGR+ M + + + Sbjct: 366 ------------AIGIVYFLFACTSPFLIHKVGRR--WLSLFQLASCMVALMLLSLFTFL 411 Query: 517 TNKQAVQNVSWILLVALIVYIVCYAIGLSTVPYV 618 N + ++ + + +L+ Y+ Y +G S +P++ Sbjct: 412 QNYENIEWARYGTIFSLVFYMCVYGVG-SPIPWI 444 >Z81122-5|CAB03357.1| 579|Caenorhabditis elegans Hypothetical protein T13F2.6 protein. Length = 579 Score = 31.1 bits (67), Expect = 0.78 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = +3 Query: 186 SHQQKSDVDYSRGFHGTTVLW*RCSCSVFTIYIQLYHRAYYTAKWNLRRDNP 341 SH + VD S FH + S ++ I + +HR+ AKW L R NP Sbjct: 370 SHDVEFVVDISGMFHDQNL-----SLGLYEIKVVRFHRSNVFAKWRLARKNP 416 >AF022974-3|AAC48037.1| 346|Caenorhabditis elegans Seven tm receptor protein 207 protein. Length = 346 Score = 31.1 bits (67), Expect = 0.78 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = +1 Query: 505 YFYDTNKQAVQNVSWILLVALIVYIVCYAIGLSTVPY 615 YFY+TN + ++ + +A+IV I+ + L TV Y Sbjct: 184 YFYETNSDGITDIYYPSFIAIIVNILITIVSLITVFY 220 >AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical protein Y66D12A.13 protein. Length = 533 Score = 29.5 bits (63), Expect = 2.4 Identities = 43/196 (21%), Positives = 77/196 (39%), Gaps = 5/196 (2%) Frame = +1 Query: 4 LVLCFL-PESPYYYLKFERSDRAERSLRSL-RSGDIRTELKSIELNVQEDMKNRGSWSDL 177 L+ FL PESP Y ++ + A +S++ + + +R +L E+ ED+ + D Sbjct: 241 LICAFLLPESPKYLIQARKGKLAVKSIKYINKFKRVRNQLTDTEI---EDVVHSAIEVDT 297 Query: 178 FTEATNKKAMWITLGV---FTVQQFCGSAAVVAYSQFIFNCTTGPTILPNGTLEETTRKS 348 + A KK +I L + TVQ S ++ + S + +L Sbjct: 298 KSRAKAKKYSFIHLYIHPKITVQTVVASISMFSVSYVTYGLLFNYDVLTGSIYMNAAVSG 357 Query: 349 IEPYQESIIIGCVQVATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTIGTYFYFYDTNKQ 528 Y ++G V +L + VGRK M G +F ++ N Sbjct: 358 FLRY----VVGAV---VAVLDHFGGEHVGRK--RMHFITVSFIMCCMFGIFFIYF--NDL 406 Query: 529 AVQNVSWILLVALIVY 576 ++ SWI + L+ + Sbjct: 407 VLEYKSWIRALTLLAF 422 >Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical protein ZK836.2 protein. Length = 911 Score = 29.1 bits (62), Expect = 3.2 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = +1 Query: 103 IRTELKSIELNVQEDMKNRGSWSDLFTEATNKKAMWITLGVFT-VQQFCGSAAVVAYSQF 279 + ELK ++ V D+ +RG W F +A W T GV T + +F G+ +V F Sbjct: 478 LNNELKKVDSTVPIDISHRGRWEG-FKQAPKAIESWDT-GVATDLLRFIGAGSVKVPEDF 535 >Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical protein ZK836.2 protein. Length = 911 Score = 29.1 bits (62), Expect = 3.2 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = +1 Query: 103 IRTELKSIELNVQEDMKNRGSWSDLFTEATNKKAMWITLGVFT-VQQFCGSAAVVAYSQF 279 + ELK ++ V D+ +RG W F +A W T GV T + +F G+ +V F Sbjct: 478 LNNELKKVDSTVPIDISHRGRWEG-FKQAPKAIESWDT-GVATDLLRFIGAGSVKVPEDF 535 >Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical protein F14E5.1 protein. Length = 472 Score = 29.1 bits (62), Expect = 3.2 Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 4/216 (1%) Frame = +1 Query: 4 LVLCFLPESPYYYLKFERSDRAERSLRSLR--SGDIRTELKSIELNVQEDMKNRGSWSDL 177 L+L LPE+P + L + D E +++S++ GD T+ K V ED++ Sbjct: 198 LILFILPETPKFLLISK--DEEEEAIKSVKYYHGD-GTDAKQ----VLEDIRKEAECEQD 250 Query: 178 FTEATNKKAMWITLGVFTVQQFCGSAAVVAYSQFIFNCTTGPTILPNGT--LEETTRKSI 351 +++T + M +FT ++ A +++ S + N +L + T LE +S Sbjct: 251 SSKSTTFQKM---KELFT-ERHLRMALILSVSA-LTNTVGLWALLLSSTFFLENANVESE 305 Query: 352 EPYQESIIIGCVQVATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTIGTYFYFYDTNKQA 531 + +G V+ I +++++VGR+ +N F F+ + Sbjct: 306 IAEWSTTAMGLAYVSGTITGGIVIEKVGRRKLLLLFTF----LNNLALIAFVFFAKIRIL 361 Query: 532 VQNVSWILLVALIVYIVCYAIGLSTVPYVTIGGDVP 639 + + + LVALI+Y Y G+ + + VP Sbjct: 362 IDPMKYGCLVALIIYGYTYGTGVGPISWFISSELVP 397 >Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical protein F14E5.1 protein. Length = 472 Score = 29.1 bits (62), Expect = 3.2 Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 4/216 (1%) Frame = +1 Query: 4 LVLCFLPESPYYYLKFERSDRAERSLRSLR--SGDIRTELKSIELNVQEDMKNRGSWSDL 177 L+L LPE+P + L + D E +++S++ GD T+ K V ED++ Sbjct: 198 LILFILPETPKFLLISK--DEEEEAIKSVKYYHGD-GTDAKQ----VLEDIRKEAECEQD 250 Query: 178 FTEATNKKAMWITLGVFTVQQFCGSAAVVAYSQFIFNCTTGPTILPNGT--LEETTRKSI 351 +++T + M +FT ++ A +++ S + N +L + T LE +S Sbjct: 251 SSKSTTFQKM---KELFT-ERHLRMALILSVSA-LTNTVGLWALLLSSTFFLENANVESE 305 Query: 352 EPYQESIIIGCVQVATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTIGTYFYFYDTNKQA 531 + +G V+ I +++++VGR+ +N F F+ + Sbjct: 306 IAEWSTTAMGLAYVSGTITGGIVIEKVGRRKLLLLFTF----LNNLALIAFVFFAKIRIL 361 Query: 532 VQNVSWILLVALIVYIVCYAIGLSTVPYVTIGGDVP 639 + + + LVALI+Y Y G+ + + VP Sbjct: 362 IDPMKYGCLVALIIYGYTYGTGVGPISWFISSELVP 397 >AF039042-11|AAC48251.1| 343|Caenorhabditis elegans Serpentine receptor, class h protein199 protein. Length = 343 Score = 29.1 bits (62), Expect = 3.2 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Frame = +1 Query: 490 IGTYFYFYDTNKQAVQNVSWILLVALI-VYIVCYAIGLSTVPYV 618 +G Y + T KQ +++V W +L+ I V I Y+ + TVP+V Sbjct: 35 LGLYCIIFKTPKQ-MRSVKWYMLILHIYVMIFDYSYTIMTVPFV 77 >Z81544-6|CAI46607.1| 376|Caenorhabditis elegans Hypothetical protein F49C5.9 protein. Length = 376 Score = 28.7 bits (61), Expect = 4.2 Identities = 14/32 (43%), Positives = 21/32 (65%) Frame = -2 Query: 215 VIHIAFLLVASVNKSLHDPRFFMSSWTFNSIL 120 +I+ AF L A+ K+LHD F+ +WTF I+ Sbjct: 276 LIYFAFPL-AAFTKALHDVEPFLGNWTFLIIM 306 >Z81508-6|CAB04147.1| 338|Caenorhabditis elegans Hypothetical protein F20E11.10 protein. Length = 338 Score = 28.7 bits (61), Expect = 4.2 Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = +1 Query: 490 IGTYFYFYDTNKQAVQNVSWILL-VALIVYIVCYAIGLSTVPYV 618 +G Y Y+T +Q ++ V W LL + + V + Y++ L T+P++ Sbjct: 35 LGLYCVLYETPRQ-MKGVKWYLLNLHVSVMLFDYSVTLLTIPFL 77 >U53151-1|AAB37069.1| 226|Caenorhabditis elegans Clathrin light chain protein 1 protein. Length = 226 Score = 28.7 bits (61), Expect = 4.2 Identities = 13/41 (31%), Positives = 23/41 (56%) Frame = +1 Query: 118 KSIELNVQEDMKNRGSWSDLFTEATNKKAMWITLGVFTVQQ 240 K+++L+ E++KN S +LF + + A W T+ QQ Sbjct: 163 KTLQLSHDENLKNEKSNQELFAKQQDGDAQWETVNKLVDQQ 203 >U39645-7|AAA80364.1| 190|Caenorhabditis elegans Hypothetical protein C14F11.6 protein. Length = 190 Score = 28.7 bits (61), Expect = 4.2 Identities = 10/37 (27%), Positives = 18/37 (48%) Frame = +1 Query: 112 ELKSIELNVQEDMKNRGSWSDLFTEATNKKAMWITLG 222 E+ + +++++D G W + NK A WI G Sbjct: 89 EIFDVAVDIRKDSPTYGKWHGVVLNGDNKHAFWIPAG 125 >Z78418-4|CAB01698.1| 710|Caenorhabditis elegans Hypothetical protein F25D7.5 protein. Length = 710 Score = 28.3 bits (60), Expect = 5.5 Identities = 13/51 (25%), Positives = 25/51 (49%) Frame = +1 Query: 241 FCGSAAVVAYSQFIFNCTTGPTILPNGTLEETTRKSIEPYQESIIIGCVQV 393 F G+ +++ QF F C+T P P + + +E Y + ++ CV + Sbjct: 295 FFGNVSILKNFQFFFRCSTKPNKKPQ-KIPAMIQWMLEGYNANQVVRCVHL 344 >AL021497-8|CAA16409.1| 334|Caenorhabditis elegans Hypothetical protein Y51A2D.12 protein. Length = 334 Score = 27.9 bits (59), Expect = 7.3 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = +1 Query: 124 IELNVQEDMKNRGSWSDLFTEAT-NKKAMWITLGVFTVQQFCGSAAVVAYSQFIFNC 291 + L + ++ +G++S ++ N W L +F F AY+Q+IFNC Sbjct: 61 VTLRIPQNTGVQGTFSSFYSNLNLNNTENWFPLNIFHTFHF-----EFAYTQYIFNC 112 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,504,719 Number of Sequences: 27780 Number of extensions: 350137 Number of successful extensions: 1019 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 983 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1018 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1592382278 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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