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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0213
         (693 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016656-3|AAB66037.2|  515|Caenorhabditis elegans Hypothetical ...    37   0.012
Z81099-3|CAB03186.3|  490|Caenorhabditis elegans Hypothetical pr...    36   0.036
Z83113-3|CAB05545.1|  479|Caenorhabditis elegans Hypothetical pr...    34   0.084
AF047651-6|AAC02725.3|  426|Caenorhabditis elegans Hypothetical ...    32   0.34 
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as...    32   0.45 
U41023-1|AAA82340.1|  569|Caenorhabditis elegans Hypothetical pr...    31   0.59 
Z81122-5|CAB03357.1|  579|Caenorhabditis elegans Hypothetical pr...    31   0.78 
AF022974-3|AAC48037.1|  346|Caenorhabditis elegans Seven tm rece...    31   0.78 
AL161712-10|CAC35900.1|  533|Caenorhabditis elegans Hypothetical...    29   2.4  
Z78201-4|CAB01590.2|  911|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z78019-10|CAE46691.1|  911|Caenorhabditis elegans Hypothetical p...    29   3.2  
Z66522-7|CAA91409.2|  472|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z66520-13|CAA91392.2|  472|Caenorhabditis elegans Hypothetical p...    29   3.2  
AF039042-11|AAC48251.1|  343|Caenorhabditis elegans Serpentine r...    29   3.2  
Z81544-6|CAI46607.1|  376|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z81508-6|CAB04147.1|  338|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U53151-1|AAB37069.1|  226|Caenorhabditis elegans Clathrin light ...    29   4.2  
U39645-7|AAA80364.1|  190|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z78418-4|CAB01698.1|  710|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AL021497-8|CAA16409.1|  334|Caenorhabditis elegans Hypothetical ...    28   7.3  

>AF016656-3|AAB66037.2|  515|Caenorhabditis elegans Hypothetical
           protein C35A11.4 protein.
          Length = 515

 Score = 37.1 bits (82), Expect = 0.012
 Identities = 45/209 (21%), Positives = 87/209 (41%), Gaps = 4/209 (1%)
 Frame = +1

Query: 1   GLVLCFLPESPYYYLKFERSDRAERSLRSLRSGDIRTELKSIELNVQEDMKNRGS---WS 171
           G  L F PESP + ++   ++ A +S+    + +I    K +   ++E+ KN        
Sbjct: 199 GAALPFFPESPGFLIQRGATEAATKSIAYYYNCEIDEAEKHLN-EIKEEQKNSTKNFKMM 257

Query: 172 DLFTEATNKKAMWITLGVFTVQQFCGSAAVVAYSQFIFNCTTGPTILPNGTLEETTRKSI 351
           D+  + + +   +I + V     F G A + A++  I              L++T  K +
Sbjct: 258 DIVRKKSLRDKAFIGVVVTFAMSFSGVAVINAFAFDI--------------LKDTGLKVL 303

Query: 352 EPYQESIIIGCVQVATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTI-GTYFYFYDTNKQ 528
           E    +  I  V + + I++ ++VDR GR+P            N  I    F FY     
Sbjct: 304 EASLANDAISVVSMISSIVAAVIVDRNGRRPLLLISFAGILVCNLIIFALMFTFYKFENH 363

Query: 529 AVQNVSWILLVALIVYIVCYAIGLSTVPY 615
               + +IL+  + ++   +A+G   + Y
Sbjct: 364 V---LGFILICFICIFTFFFALGPGPLCY 389


>Z81099-3|CAB03186.3|  490|Caenorhabditis elegans Hypothetical
           protein K08F9.1 protein.
          Length = 490

 Score = 35.5 bits (78), Expect = 0.036
 Identities = 42/207 (20%), Positives = 83/207 (40%), Gaps = 2/207 (0%)
 Frame = +1

Query: 1   GLVLCFLPESPYYYLKFERSDRAERSLRSLRSGDIRTELKSIELNVQEDMKNRGSWS--D 174
           G  L F PESP Y ++    + A  S+      +     K ++   +E M +   ++  D
Sbjct: 199 GAALPFFPESPGYLIQKGSLESATISISFYYKCEKEEADKHVKEIQKEQMNSTKKFTMLD 258

Query: 175 LFTEATNKKAMWITLGVFTVQQFCGSAAVVAYSQFIFNCTTGPTILPNGTLEETTRKSIE 354
           +  + + +   ++   V  V  F G A + A++ F     TG  +L      + T     
Sbjct: 259 VIQQKSLRDKAFVGAVVTFVMSFSGVAVISAFA-FEILVNTGLNVLQASLANDATT---- 313

Query: 355 PYQESIIIGCVQVATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTIGTYFYFYDTNKQAV 534
                     V V + +L++ ++D+ GR+P            N  I    + +D  K   
Sbjct: 314 ---------IVSVISSVLAIAIIDKNGRRPLLLISLAGILICNLIIFGLMFTFD--KFGN 362

Query: 535 QNVSWILLVALIVYIVCYAIGLSTVPY 615
           Q + +IL+  + ++   +A+G   + Y
Sbjct: 363 QVLGFILIFFICIFQFFFALGPGPLSY 389


>Z83113-3|CAB05545.1|  479|Caenorhabditis elegans Hypothetical
           protein K08H10.6 protein.
          Length = 479

 Score = 34.3 bits (75), Expect = 0.084
 Identities = 16/82 (19%), Positives = 41/82 (50%)
 Frame = +1

Query: 391 VATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTIGTYFYFYDTNKQAVQNVSWILLVALI 570
           + + +L+ + +D++GR+P           +N  + +  + YD+ K +   ++W  L   +
Sbjct: 327 IVSALLAAIAMDKIGRRPLLITSLLVLALINIFMMSLVFLYDSTKDSF--LAWPFLALFV 384

Query: 571 VYIVCYAIGLSTVPYVTIGGDV 636
           ++   ++IG+     V IG ++
Sbjct: 385 LFTFVFSIGIGPAA-VFIGAEL 405


>AF047651-6|AAC02725.3|  426|Caenorhabditis elegans Hypothetical
           protein C05D2.8 protein.
          Length = 426

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +1

Query: 46  KFERSDRAERSLRSLRSGDIRTELKSIELNVQEDMKNRGSWSDLFTEATNKKAMWITLG 222
           K  + D  E  + S   GD   E   +E+  + DMK   S   +F +A+N+   +ITLG
Sbjct: 60  KSHKEDNKENLMNSQWGGD-GGERDIVEMEKKHDMKQDWSADAVFFDASNRDGWYITLG 117


>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 77 protein.
          Length = 1004

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 20/53 (37%), Positives = 28/53 (52%)
 Frame = +1

Query: 31  PYYYLKFERSDRAERSLRSLRSGDIRTELKSIELNVQEDMKNRGSWSDLFTEA 189
           P  Y+KFER +  ER    +R   IR+ +KS  L +    K R  W+D  T+A
Sbjct: 624 PLEYMKFERMEEDER----IRCLQIRSRVKS-ALIIFSSEKERNQWTDDLTKA 671


>U41023-1|AAA82340.1|  569|Caenorhabditis elegans Hypothetical
           protein F53H8.3 protein.
          Length = 569

 Score = 31.5 bits (68), Expect = 0.59
 Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 1/154 (0%)
 Frame = +1

Query: 160 GSWSDLFTEATNKKAMWITLGVFTVQQFCGSAAVVAYSQFIF-NCTTGPTILPNGTLEET 336
           G++ +LFT    +  + +++ V   QQF G  AV A+S  +F N    P I    TL   
Sbjct: 309 GTFRELFTRPDLRIPLAVSIIVMIAQQFTGCTAVFAFSTDMFLNAGLTPVIARFSTL--- 365

Query: 337 TRKSIEPYQESIIIGCVQVATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTIGTYFYFYD 516
                        IG V       S  L+ +VGR+            M   +    + + 
Sbjct: 366 ------------AIGIVYFLFACTSPFLIHKVGRR--WLSLFQLASCMVALMLLSLFTFL 411

Query: 517 TNKQAVQNVSWILLVALIVYIVCYAIGLSTVPYV 618
            N + ++   +  + +L+ Y+  Y +G S +P++
Sbjct: 412 QNYENIEWARYGTIFSLVFYMCVYGVG-SPIPWI 444


>Z81122-5|CAB03357.1|  579|Caenorhabditis elegans Hypothetical
           protein T13F2.6 protein.
          Length = 579

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +3

Query: 186 SHQQKSDVDYSRGFHGTTVLW*RCSCSVFTIYIQLYHRAYYTAKWNLRRDNP 341
           SH  +  VD S  FH   +     S  ++ I +  +HR+   AKW L R NP
Sbjct: 370 SHDVEFVVDISGMFHDQNL-----SLGLYEIKVVRFHRSNVFAKWRLARKNP 416


>AF022974-3|AAC48037.1|  346|Caenorhabditis elegans Seven tm
           receptor protein 207 protein.
          Length = 346

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 505 YFYDTNKQAVQNVSWILLVALIVYIVCYAIGLSTVPY 615
           YFY+TN   + ++ +   +A+IV I+   + L TV Y
Sbjct: 184 YFYETNSDGITDIYYPSFIAIIVNILITIVSLITVFY 220


>AL161712-10|CAC35900.1|  533|Caenorhabditis elegans Hypothetical
           protein Y66D12A.13 protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 43/196 (21%), Positives = 77/196 (39%), Gaps = 5/196 (2%)
 Frame = +1

Query: 4   LVLCFL-PESPYYYLKFERSDRAERSLRSL-RSGDIRTELKSIELNVQEDMKNRGSWSDL 177
           L+  FL PESP Y ++  +   A +S++ + +   +R +L   E+   ED+ +     D 
Sbjct: 241 LICAFLLPESPKYLIQARKGKLAVKSIKYINKFKRVRNQLTDTEI---EDVVHSAIEVDT 297

Query: 178 FTEATNKKAMWITLGV---FTVQQFCGSAAVVAYSQFIFNCTTGPTILPNGTLEETTRKS 348
            + A  KK  +I L +    TVQ    S ++ + S   +       +L            
Sbjct: 298 KSRAKAKKYSFIHLYIHPKITVQTVVASISMFSVSYVTYGLLFNYDVLTGSIYMNAAVSG 357

Query: 349 IEPYQESIIIGCVQVATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTIGTYFYFYDTNKQ 528
              Y    ++G V     +L     + VGRK            M    G +F ++  N  
Sbjct: 358 FLRY----VVGAV---VAVLDHFGGEHVGRK--RMHFITVSFIMCCMFGIFFIYF--NDL 406

Query: 529 AVQNVSWILLVALIVY 576
            ++  SWI  + L+ +
Sbjct: 407 VLEYKSWIRALTLLAF 422


>Z78201-4|CAB01590.2|  911|Caenorhabditis elegans Hypothetical
           protein ZK836.2 protein.
          Length = 911

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +1

Query: 103 IRTELKSIELNVQEDMKNRGSWSDLFTEATNKKAMWITLGVFT-VQQFCGSAAVVAYSQF 279
           +  ELK ++  V  D+ +RG W   F +A      W T GV T + +F G+ +V     F
Sbjct: 478 LNNELKKVDSTVPIDISHRGRWEG-FKQAPKAIESWDT-GVATDLLRFIGAGSVKVPEDF 535


>Z78019-10|CAE46691.1|  911|Caenorhabditis elegans Hypothetical
           protein ZK836.2 protein.
          Length = 911

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +1

Query: 103 IRTELKSIELNVQEDMKNRGSWSDLFTEATNKKAMWITLGVFT-VQQFCGSAAVVAYSQF 279
           +  ELK ++  V  D+ +RG W   F +A      W T GV T + +F G+ +V     F
Sbjct: 478 LNNELKKVDSTVPIDISHRGRWEG-FKQAPKAIESWDT-GVATDLLRFIGAGSVKVPEDF 535


>Z66522-7|CAA91409.2|  472|Caenorhabditis elegans Hypothetical
           protein F14E5.1 protein.
          Length = 472

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 4/216 (1%)
 Frame = +1

Query: 4   LVLCFLPESPYYYLKFERSDRAERSLRSLR--SGDIRTELKSIELNVQEDMKNRGSWSDL 177
           L+L  LPE+P + L  +  D  E +++S++   GD  T+ K     V ED++        
Sbjct: 198 LILFILPETPKFLLISK--DEEEEAIKSVKYYHGD-GTDAKQ----VLEDIRKEAECEQD 250

Query: 178 FTEATNKKAMWITLGVFTVQQFCGSAAVVAYSQFIFNCTTGPTILPNGT--LEETTRKSI 351
            +++T  + M     +FT ++    A +++ S  + N      +L + T  LE    +S 
Sbjct: 251 SSKSTTFQKM---KELFT-ERHLRMALILSVSA-LTNTVGLWALLLSSTFFLENANVESE 305

Query: 352 EPYQESIIIGCVQVATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTIGTYFYFYDTNKQA 531
                +  +G   V+  I   +++++VGR+            +N      F F+   +  
Sbjct: 306 IAEWSTTAMGLAYVSGTITGGIVIEKVGRRKLLLLFTF----LNNLALIAFVFFAKIRIL 361

Query: 532 VQNVSWILLVALIVYIVCYAIGLSTVPYVTIGGDVP 639
           +  + +  LVALI+Y   Y  G+  + +      VP
Sbjct: 362 IDPMKYGCLVALIIYGYTYGTGVGPISWFISSELVP 397


>Z66520-13|CAA91392.2|  472|Caenorhabditis elegans Hypothetical
           protein F14E5.1 protein.
          Length = 472

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 4/216 (1%)
 Frame = +1

Query: 4   LVLCFLPESPYYYLKFERSDRAERSLRSLR--SGDIRTELKSIELNVQEDMKNRGSWSDL 177
           L+L  LPE+P + L  +  D  E +++S++   GD  T+ K     V ED++        
Sbjct: 198 LILFILPETPKFLLISK--DEEEEAIKSVKYYHGD-GTDAKQ----VLEDIRKEAECEQD 250

Query: 178 FTEATNKKAMWITLGVFTVQQFCGSAAVVAYSQFIFNCTTGPTILPNGT--LEETTRKSI 351
            +++T  + M     +FT ++    A +++ S  + N      +L + T  LE    +S 
Sbjct: 251 SSKSTTFQKM---KELFT-ERHLRMALILSVSA-LTNTVGLWALLLSSTFFLENANVESE 305

Query: 352 EPYQESIIIGCVQVATCILSVLLVDRVGRKPXXXXXXXXXXXMNGTIGTYFYFYDTNKQA 531
                +  +G   V+  I   +++++VGR+            +N      F F+   +  
Sbjct: 306 IAEWSTTAMGLAYVSGTITGGIVIEKVGRRKLLLLFTF----LNNLALIAFVFFAKIRIL 361

Query: 532 VQNVSWILLVALIVYIVCYAIGLSTVPYVTIGGDVP 639
           +  + +  LVALI+Y   Y  G+  + +      VP
Sbjct: 362 IDPMKYGCLVALIIYGYTYGTGVGPISWFISSELVP 397


>AF039042-11|AAC48251.1|  343|Caenorhabditis elegans Serpentine
           receptor, class h protein199 protein.
          Length = 343

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +1

Query: 490 IGTYFYFYDTNKQAVQNVSWILLVALI-VYIVCYAIGLSTVPYV 618
           +G Y   + T KQ +++V W +L+  I V I  Y+  + TVP+V
Sbjct: 35  LGLYCIIFKTPKQ-MRSVKWYMLILHIYVMIFDYSYTIMTVPFV 77


>Z81544-6|CAI46607.1|  376|Caenorhabditis elegans Hypothetical
           protein F49C5.9 protein.
          Length = 376

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -2

Query: 215 VIHIAFLLVASVNKSLHDPRFFMSSWTFNSIL 120
           +I+ AF L A+  K+LHD   F+ +WTF  I+
Sbjct: 276 LIYFAFPL-AAFTKALHDVEPFLGNWTFLIIM 306


>Z81508-6|CAB04147.1|  338|Caenorhabditis elegans Hypothetical
           protein F20E11.10 protein.
          Length = 338

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = +1

Query: 490 IGTYFYFYDTNKQAVQNVSWILL-VALIVYIVCYAIGLSTVPYV 618
           +G Y   Y+T +Q ++ V W LL + + V +  Y++ L T+P++
Sbjct: 35  LGLYCVLYETPRQ-MKGVKWYLLNLHVSVMLFDYSVTLLTIPFL 77


>U53151-1|AAB37069.1|  226|Caenorhabditis elegans Clathrin light
           chain protein 1 protein.
          Length = 226

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +1

Query: 118 KSIELNVQEDMKNRGSWSDLFTEATNKKAMWITLGVFTVQQ 240
           K+++L+  E++KN  S  +LF +  +  A W T+     QQ
Sbjct: 163 KTLQLSHDENLKNEKSNQELFAKQQDGDAQWETVNKLVDQQ 203


>U39645-7|AAA80364.1|  190|Caenorhabditis elegans Hypothetical
           protein C14F11.6 protein.
          Length = 190

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +1

Query: 112 ELKSIELNVQEDMKNRGSWSDLFTEATNKKAMWITLG 222
           E+  + +++++D    G W  +     NK A WI  G
Sbjct: 89  EIFDVAVDIRKDSPTYGKWHGVVLNGDNKHAFWIPAG 125


>Z78418-4|CAB01698.1|  710|Caenorhabditis elegans Hypothetical
           protein F25D7.5 protein.
          Length = 710

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/51 (25%), Positives = 25/51 (49%)
 Frame = +1

Query: 241 FCGSAAVVAYSQFIFNCTTGPTILPNGTLEETTRKSIEPYQESIIIGCVQV 393
           F G+ +++   QF F C+T P   P   +    +  +E Y  + ++ CV +
Sbjct: 295 FFGNVSILKNFQFFFRCSTKPNKKPQ-KIPAMIQWMLEGYNANQVVRCVHL 344


>AL021497-8|CAA16409.1|  334|Caenorhabditis elegans Hypothetical
           protein Y51A2D.12 protein.
          Length = 334

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 124 IELNVQEDMKNRGSWSDLFTEAT-NKKAMWITLGVFTVQQFCGSAAVVAYSQFIFNC 291
           + L + ++   +G++S  ++    N    W  L +F    F       AY+Q+IFNC
Sbjct: 61  VTLRIPQNTGVQGTFSSFYSNLNLNNTENWFPLNIFHTFHF-----EFAYTQYIFNC 112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,504,719
Number of Sequences: 27780
Number of extensions: 350137
Number of successful extensions: 1019
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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