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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0212
         (754 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_53276| Best HMM Match : No HMM Matches (HMM E-Value=.)             107   7e-24
SB_36049| Best HMM Match : WD40 (HMM E-Value=2e-07)                    55   5e-08
SB_45790| Best HMM Match : SERTA (HMM E-Value=2.8e-07)                 38   0.009
SB_56678| Best HMM Match : WD40 (HMM E-Value=6.4e-22)                  37   0.015
SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.)                34   0.11 
SB_59116| Best HMM Match : TPR_1 (HMM E-Value=6.7e-15)                 31   1.3  
SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.8  
SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18)                    29   3.1  
SB_57395| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_10356| Best HMM Match : WD40 (HMM E-Value=6e-10)                    29   4.1  
SB_50716| Best HMM Match : WD40 (HMM E-Value=0)                        29   5.4  
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   5.4  
SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10)            29   5.4  
SB_31688| Best HMM Match : WD40 (HMM E-Value=3.3e-10)                  29   5.4  
SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.1  
SB_40168| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_34371| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_44965| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.4  
SB_26375| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.4  
SB_25462| Best HMM Match : Peptidase_S8 (HMM E-Value=0)                28   9.4  

>SB_53276| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 424

 Score =  107 bits (258), Expect = 7e-24
 Identities = 71/237 (29%), Positives = 119/237 (50%), Gaps = 10/237 (4%)
 Frame = +1

Query: 67  DIQGTFVSQKINKVRWIPEDYAETK---CFLTGSWDDEVNLITVWTFESVNEDEEVEYPR 237
           +I   +V  KI+K RW        +    F TG WDD  N ++VW  E +  +     P 
Sbjct: 6   EIVAKYVGHKISKARWASARQGSLEPSDTFTTGGWDDHRNRLSVWQIEDIPAE-----PG 60

Query: 238 ALTKYPVDDDVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNT 417
           A+T    ++ +          +A +   GDV  +++  Y +Q        W+ +H + + 
Sbjct: 61  AVTGTTPNEPIL---------VADTEHIGDVTDIQV-IYIEQV-------WERMHFHLDQ 103

Query: 418 KCSATSLDTYE--GDIASIGEDGNVNIL-SGRRGEV---NRTIK-GADSCSLHSICYLKH 576
            C  TS+ T +   DI + GEDG +N+L +G +  +   +   K  ADS S++ I +   
Sbjct: 104 SCPCTSVATSQTSSDIITAGEDGRLNVLKTGNQNPIRFYDLVFKDSADSTSINDITFTTT 163

Query: 577 TEVITGNIRGHIKIWDLRSEVDKPAASFLLAGDELAATCIINHPTQPHIVLAGSESG 747
           +EV+     G +K+WDLR+  +KP+ + LL+GD +   C+  HPTQPH++ AG + G
Sbjct: 164 SEVVGVTFSGQVKMWDLRNRNNKPSRTMLLSGDRVPLLCVDKHPTQPHLLAAGGQDG 220


>SB_36049| Best HMM Match : WD40 (HMM E-Value=2e-07)
          Length = 711

 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 20/44 (45%), Positives = 31/44 (70%)
 Frame = +1

Query: 616 IWDLRSEVDKPAASFLLAGDELAATCIINHPTQPHIVLAGSESG 747
           +WDLR+  +KP+ + LL+GD +   C+  HPTQPH++ AG + G
Sbjct: 1   MWDLRNRNNKPSRTMLLSGDRVPLLCVDKHPTQPHLLAAGGQDG 44


>SB_45790| Best HMM Match : SERTA (HMM E-Value=2.8e-07)
          Length = 1213

 Score = 37.9 bits (84), Expect = 0.009
 Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
 Frame = +1

Query: 409 GNTKCSATSLDTYEGDIASIGE----DGNVNILSGRRGEVNRTIKGADSCSLHSICYLKH 576
           G +  +  SLD  +GD    G+    DGNV    G  G+ + +++  D   + S      
Sbjct: 103 GASHNAVNSLDDGDGDGGGSGDSDYGDGNVG---GDNGDFDYSLQDGDEW-MGSAFAAHP 158

Query: 577 TEV----ITGNIRGHIKIWDLRSEVDKPAASFLLAGDELAATCIINHPTQPHIVLAGSES 744
           TE     +T  +   IK+WDLR+  + P A ++  G E  + C  +H  Q H  +AGS +
Sbjct: 159 TEAYDLFLTAAVTDGIKLWDLRT--NNPCARYIATGSEDRSVC-ASH--QYHACVAGSVT 213

Query: 745 G 747
           G
Sbjct: 214 G 214


>SB_56678| Best HMM Match : WD40 (HMM E-Value=6.4e-22)
          Length = 834

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 18/77 (23%), Positives = 35/77 (45%)
 Frame = +1

Query: 403 NYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTE 582
           N+    C A +       + +  +D ++  +    G +   IK A SC ++ +  +    
Sbjct: 87  NHHKKPCRALAFSKDGLHLFTASKDKSLQAIDMNSGSIAHAIKKAHSCPVNCLKVISDHL 146

Query: 583 VITGNIRGHIKIWDLRS 633
           V TG+  G +K+WD R+
Sbjct: 147 VATGDDEGSVKVWDSRT 163


>SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2656

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 19/93 (20%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
 Frame = -2

Query: 531  FDCTVDFTPSATQYVHIAILTNTSYVSFICIQRCCR-AFCITVVM*RLPRKYFFKWCLFI 355
            + CT+     +    ++++        F+ +   C  A CI  +   L   Y    C+F 
Sbjct: 1815 YPCTICIFALSVSLHYLSLCAVCILALFVSLSYLCLCAICIFALSVSLRYLYLCAICIFA 1874

Query: 354  ISTNFKYFYITIRY*NGYFVFFREFYLCNIIIY 256
            +S + +Y Y+        ++  R  YLC I ++
Sbjct: 1875 LSVSLRYLYLCAFCIFALYLSLRFLYLCAIFVF 1907



 Score = 31.9 bits (69), Expect = 0.57
 Identities = 22/70 (31%), Positives = 29/70 (41%)
 Frame = -2

Query: 417  CITVVM*RLPRKYFFKWCLFIISTNFKYFYITIRY*NGYFVFFREFYLCNIIIYWILGKG 238
            CI  +   L   YF   C+F +S + +Y  +         V  R  YLC I I+  L   
Sbjct: 1699 CIFALSVSLRYLYFCTICVFALSVSLRYLCLCAICVFALSVSLRYLYLCAICIF-ALSVS 1757

Query: 237  TRIFYLFVFV 208
                YL VFV
Sbjct: 1758 LHYLYLCVFV 1767



 Score = 31.1 bits (67), Expect = 1.0
 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
 Frame = -2

Query: 423  AFCITVVM*RLPRKYFFKWCLFIISTNFKYFYITIRY*NGYFVFFREFYLCNIIIYWILG 244
            AFCI  +   L   Y    C+F +S + +Y  +         V  R  YLC I I+  L 
Sbjct: 1971 AFCIFALSVSLRYLYLCAICIFALSVSLRYICLYAICIFALSVSLRFLYLCAICIF-ALS 2029

Query: 243  KGTRIFYL---FVF 211
               R  YL   FVF
Sbjct: 2030 VSLRFLYLCAIFVF 2043



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = -2

Query: 369  WCLFIISTNFKYFYITIRY*NGYFVFFREFYLCNIIIYWILGKGTRIFYLFVF 211
            +C+F +S + +Y  +        FV  R  YLC I I+  L    R  YL  F
Sbjct: 1921 FCIFALSVSLRYLCLCAICIFAVFVSLRYLYLCGIRIF-ALSVSLRFLYLCAF 1972



 Score = 29.5 bits (63), Expect = 3.1
 Identities = 16/59 (27%), Positives = 25/59 (42%)
 Frame = -2

Query: 432  CCRAFCITVVM*RLPRKYFFKWCLFIISTNFKYFYITIRY*NGYFVFFREFYLCNIIIY 256
            C  A C+  +   L   Y    C+F +S +  Y Y+ +      FVF     LC I ++
Sbjct: 1728 CLCAICVFALSVSLRYLYLCAICIFALSVSLHYLYLCV------FVFLPYLCLCAIFVF 1780


>SB_59116| Best HMM Match : TPR_1 (HMM E-Value=6.7e-15)
          Length = 884

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = +1

Query: 583 VITGNIRGHIKIWDLRSEVDKPAASFLLAGDELAATCIINHPTQPHIVLAG 735
           V++G+  GH+ +WD ++E      +FL A       C+  HP+ P +  +G
Sbjct: 142 VVSGSDCGHVFLWDKQTE---EIVNFLDADATGVVNCLEPHPSAPVLATSG 189


>SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1308

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 22/91 (24%), Positives = 43/91 (47%)
 Frame = +1

Query: 475  DGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEVDKPAA 654
            +GN+ I     G     +KG  S  + S+   K   + +G+    +++WDLRS+      
Sbjct: 1126 NGNIQISDCTTGNTIGQLKGHSS-HIMSVYAAKDDIIASGSNDNTVRLWDLRSQ---RCI 1181

Query: 655  SFLLAGDELAATCIINHPTQPHIVLAGSESG 747
              +  GD   ++  +N P+   ++++G E G
Sbjct: 1182 DAIATGDSCVSSVCVN-PSGT-LLVSGHEDG 1210


>SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18)
          Length = 1764

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 20/64 (31%), Positives = 27/64 (42%)
 Frame = +1

Query: 367  PLKEIFSWKSLHNYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSC 546
            PL  IF W  +      K   T    +   +AS   DGN  ILS RR + N  I+     
Sbjct: 1519 PLDVIFIWDVVRRQMLFKVDRTGYARFVLTLASFTPDGNEFILSIRRDDKNDYIRHPSVW 1578

Query: 547  SLHS 558
             +H+
Sbjct: 1579 HVHT 1582


>SB_57395| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 338

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +1

Query: 151 TGSWDDEVNLITVWTFESVNEDEEVEYPRALTKYPVDDDVTQIKFT 288
           T SW  E+ + T++ F     D E+ YP ++    V+  V  I +T
Sbjct: 238 TLSWIPELTVFTIFAFAPRYVDIEIAYPASVAMVTVNSAVNPIIYT 283


>SB_10356| Best HMM Match : WD40 (HMM E-Value=6e-10)
          Length = 283

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
 Frame = +1

Query: 475 DGNVNILSGRRGEVN--RTIKGADSCSLHSICYLKHTE--VITGNIRGHIKIWDLRSEV 639
           DG + I   +   +N   TI  +D   +H++ Y  H    V TG+  G IKIW L  E+
Sbjct: 205 DGRLLIYDMKVNHINPVTTIDVSDKKPVHTLEYNIHRRQLVATGDSEGVIKIWRLSDEL 263


>SB_50716| Best HMM Match : WD40 (HMM E-Value=0)
          Length = 494

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 22/129 (17%), Positives = 54/129 (41%)
 Frame = +1

Query: 265 DVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDT 444
           D++  +    ++ AV++ + D K +  ++ D+   +    + + +      +     L  
Sbjct: 302 DISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHRRGIACLQY 361

Query: 445 YEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWD 624
            +  + S   D  + +     G   R ++G +   L       +  +++G   G IK+WD
Sbjct: 362 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRIVSGAYDGKIKVWD 419

Query: 625 LRSEVDKPA 651
           L++ +D  A
Sbjct: 420 LQAALDPRA 428


>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1894

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 17/34 (50%), Positives = 18/34 (52%)
 Frame = -3

Query: 680  NSSPASKNDAAGLSTSDRRSQILMWPRMLPVITS 579
            N+SP S   A  LSTSDR S IL  P      TS
Sbjct: 1641 NTSPESLPAAEPLSTSDRSSSILPEPSTTDATTS 1674


>SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10)
          Length = 416

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
 Frame = -1

Query: 511 HPFGHSICSHCHPHQY*LCLLHMYPKMLQSILYYRSYVKTSKKIFL*VVFVYHKH*FQ-- 338
           HP    I  H HP    + + H +P     I+ +  +  +S      ++ ++H H     
Sbjct: 43  HPSSSIIIHHHHPSSSIIIIHHHHPSSSSIIIIHHHHPSSSS-----IIIIHHHHPSSSS 97

Query: 337 -VFLHHH 320
            + +HHH
Sbjct: 98  IIIIHHH 104


>SB_31688| Best HMM Match : WD40 (HMM E-Value=3.3e-10)
          Length = 841

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
 Frame = +1

Query: 457 IASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVI-TGNIRGHIKIWDLRS 633
           +AS   D  + I++   G+  RT++G          +    E++ +G + G ++IWDL  
Sbjct: 1   MASTHGDHTIRIVNSYTGKCLRTLQGHPRTPWCIAFHPSADELVASGCLGGEVRIWDL-- 58

Query: 634 EVDKPAASFLLAGDELAATCIINHPTQPHIVLAGS 738
              K         D      +  HPT   +++A S
Sbjct: 59  ---KGGCEMYTPPDRAVIASLAFHPTDKVLLIATS 90


>SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1803

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
 Frame = +1

Query: 541  SCSLHSICYLKHTE--VITGNIRGHIKIWDLRSEVDKPAASFLLAGDELAATCIINHPTQ 714
            SC + + C   H    V +G     I++W   + VD+   S    GD+L   CI   P  
Sbjct: 1548 SCGVRA-CTFSHDASLVASGGDELKIRVWSRETGVDQHVLS---CGDKLLPCCIRFSPND 1603

Query: 715  PHIVLAGSES 744
              I+  G  S
Sbjct: 1604 KQIIAVGEYS 1613


>SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 801

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 1/163 (0%)
 Frame = +1

Query: 148 LTGSWDDEVNLITVWTFESVNEDEEVEYPRALTKYPVDDDVTQIKFTEKNKIAVSIS-NG 324
           +TGS D     I VW F +    ++++Y        +D+ V  + F+  +++  S   +G
Sbjct: 230 VTGSVD---GFIEVWNFTTGKIRKDLKYQAQENFMMMDETVLCLTFSRDSEMLASGGQDG 286

Query: 325 DVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDTYEGDIASIGEDGNVNILSGR 504
            +K+ ++     QT  + +  ++  H+ G T C   S D  +  + S   D  + +   +
Sbjct: 287 KIKVWKL-----QTG-QCLRRFERAHSKGVT-CVTFSRDASQ--LLSGSFDMTIRMHGLK 337

Query: 505 RGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRS 633
            G+  +  +G  S     I       +I+ +  G IKIW+++S
Sbjct: 338 SGKTLKEFRGHTSFVNDVIFTADAHHIISASSDGTIKIWNIKS 380


>SB_40168| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1554

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 43/211 (20%), Positives = 91/211 (43%), Gaps = 7/211 (3%)
 Frame = +1

Query: 91   QKINKVRWIPEDYAETKCFLTGSWDDEVNLITVWTFESVNEDEEVEYPRALTKYPVDDDV 270
            Q++NK+    E+  + K  +T    ++V ++  +T   V +    +  R +TK+ + +  
Sbjct: 972  QEVNKITVKTEEVKDVK--ITSK--NQVVVMPSFTLLLVYDLSTAKLVREITKFKMQEGQ 1027

Query: 271  TQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLK-EIFSWKSLHNYGNTKCSATSLDTY 447
             +++ T+  + AVS    ++ I ++   +    L+  IF  K +    NT  S T  D  
Sbjct: 1028 CKLQITDDGRKAVSTDMFEILITDLETGEVTPCLRSSIFRLKMITRDANTILS-TGQDFL 1086

Query: 448  EGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIR--GHIKIW 621
                    ED + N+      +  +  K ADS +  +    K   +   NI+    + +W
Sbjct: 1087 LRVYDKSREDDDENVQDTNVVQY-QEYKIADSITTMTPSVDKRHVIAMANIQLSNQMTLW 1145

Query: 622  DL----RSEVDKPAASFLLAGDELAATCIIN 702
            D     +    K  A+  L+G+ + +T +++
Sbjct: 1146 DTFTGEKVRHTKGNANISLSGNPIRSTLMLH 1176


>SB_34371| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 644

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = +1

Query: 457 IASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDL 627
           I S   D ++ +     G+   T+ G  S  L S   L++  +++GN    +KIWD+
Sbjct: 492 IVSGSLDTSIRVWHAETGQCLHTLVGHQS--LTSGMELRNNTLVSGNADSTVKIWDI 546



 Score = 28.3 bits (60), Expect = 7.1
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
 Frame = +1

Query: 397 LHNYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKH 576
           LH     +   + ++     + S   D  V I     G+  +T+ G +       C    
Sbjct: 512 LHTLVGHQSLTSGMELRNNTLVSGNADSTVKIWDITTGQCLQTLAGPNKHQSAVTCLQFS 571

Query: 577 TE-VITGNIRGHIKIWDLRS 633
           ++ VIT +  G +KIWDL++
Sbjct: 572 SKFVITSSDDGTVKIWDLQT 591


>SB_44965| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1114

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +1

Query: 397 LHNYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCS 549
           L  Y + +CS+T   T+ GD    GE+    + +    E   T +G  S +
Sbjct: 757 LSTYYDEQCSSTMAVTFTGDSHRSGEEEYTLVTTNLHHECTDTFRGTSSAA 807


>SB_26375| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 297

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
 Frame = +1

Query: 583 VITGNIRGHIKIWDLRSEVDKPAASFL----LAGDELAATCIINHPTQPHIVLAGSESGS 750
           + TG      +IWDLR ++D      L    +        C+  HP Q  +++ G +SG+
Sbjct: 97  MFTGGEDSSARIWDLRKQIDFSRTRSLQCQRVFQVNAPVNCVALHPNQGELIV-GDQSGA 155


>SB_25462| Best HMM Match : Peptidase_S8 (HMM E-Value=0)
          Length = 446

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +1

Query: 397 LHNYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCS 549
           L  Y + +CS+T   T+ GD    GE+    + +    E   T +G  S +
Sbjct: 352 LSTYYDEQCSSTMAVTFTGDSHRSGEEEYTLVTTNLHHECTDTFRGTSSAA 402


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.317    0.135    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,177,834
Number of Sequences: 59808
Number of extensions: 505803
Number of successful extensions: 1228
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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