Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0212
         (754 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    26   1.4  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   4.4  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   5.8  
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    23   7.7  

>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 526 LYG*LHPFGHSICSHCHPHQY 464
           LYG LH  GH++ ++ H   Y
Sbjct: 359 LYGSLHNMGHNVIAYVHDPDY 379


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 752 PDPDSLPASTI*GCVG*LMMHVA 684
           P PD +PAS +  C   L  H+A
Sbjct: 488 PGPDGIPASVLINCKDVLAPHLA 510


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +1

Query: 448 EGDIASIG-EDGNVNILSGRRGEVNRTIKGADS 543
           E ++ S G E+G++  L+GRR  + + ++G  S
Sbjct: 462 ERELQSTGYEEGSMETLAGRRQALQQEVRGLRS 494


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -1

Query: 460 LCLLHMYPKMLQSILYYRSYVKTSKKI 380
           LC+ ++ P ++ S+ Y R Y+K   ++
Sbjct: 218 LCVQYVLPILIVSMAYLRIYLKLKHRL 244


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.135    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 810,460
Number of Sequences: 2352
Number of extensions: 18599
Number of successful extensions: 37
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)