Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0208
(641 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72; Fungi/... 139 6e-32
UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6; Metazoa... 138 1e-31
UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella ve... 104 2e-21
UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila melanogaster|... 94 2e-18
UniRef50_Q0ULI2 Cluster: Predicted protein; n=12; Pezizomycotina... 94 2e-18
UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22; Fung... 93 5e-18
UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4; Bilater... 92 9e-18
UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22; Viri... 78 2e-13
UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyosteli... 76 6e-13
UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177, w... 71 3e-11
UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containin... 69 1e-10
UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes va... 65 2e-09
UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=... 64 4e-09
UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10; Eurya... 61 2e-08
UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2; ... 60 4e-08
UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3; ... 59 1e-07
UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;... 59 1e-07
UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2; Cryptos... 56 5e-07
UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein RL... 56 5e-07
UniRef50_O22165 Cluster: Probable ribosome biogenesis protein RL... 56 7e-07
UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10... 55 1e-06
UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13... 55 1e-06
UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=... 55 2e-06
UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative... 55 2e-06
UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5; ... 54 2e-06
UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2; Deutero... 54 2e-06
UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2; Cryptospor... 54 2e-06
UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN full... 54 3e-06
UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein RL... 54 3e-06
UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3; ... 53 5e-06
UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lambl... 52 9e-06
UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1; ... 52 9e-06
UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein RL... 52 9e-06
UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1; ... 51 2e-05
UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=... 51 3e-05
UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellul... 51 3e-05
UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6; T... 50 4e-05
UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, wh... 50 4e-05
UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4; Euroti... 50 4e-05
UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein RL... 48 1e-04
UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia... 48 2e-04
UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;... 48 3e-04
UniRef50_Q17606 Cluster: Probable ribosome biogenesis protein RL... 44 0.003
UniRef50_Q8TVE8 Cluster: 50S ribosomal protein L24e; n=5; Archae... 43 0.005
UniRef50_Q8PU76 Cluster: 50S ribosomal protein L24e; n=11; Eurya... 42 0.010
UniRef50_A2DJQ1 Cluster: Ribosomal protein L24e, putative; n=1; ... 41 0.022
UniRef50_A2ZTR3 Cluster: Putative uncharacterized protein; n=3; ... 38 0.16
UniRef50_P14116 Cluster: 50S ribosomal protein L24e; n=6; Haloba... 37 0.48
UniRef50_A3H7X1 Cluster: Ribosomal protein L24E; n=2; Thermoprot... 36 0.83
UniRef50_Q4XNU9 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_A7DR44 Cluster: Ribosomal protein L24E; n=1; Candidatus... 35 1.9
UniRef50_Q9AVV9 Cluster: 60S ribosomal protein L24; n=1; Guillar... 34 2.5
UniRef50_Q4DSX9 Cluster: Putative uncharacterized protein; n=2; ... 34 2.5
UniRef50_Q00UQ8 Cluster: Chromosome 15 contig 1, DNA sequence; n... 34 3.4
UniRef50_A0RUB6 Cluster: Ribosomal protein L24E; n=1; Cenarchaeu... 33 4.4
UniRef50_Q55BQ0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.7
>UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24 -
Homo sapiens (Human)
Length = 157
Score = 139 bits (336), Expect = 6e-32
Identities = 64/101 (63%), Positives = 73/101 (72%)
Frame = +1
Query: 4 GYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXX 183
GYKIYPGHG+ + DGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE
Sbjct: 10 GYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQK 69
Query: 184 XXXXXXXXXXXXIVGASLSDIMAKRNMKPEVRKAQREQAIK 306
I GASL+DIMAKRN KPEVRKAQREQAI+
Sbjct: 70 KRTRRAVKFQRAITGASLADIMAKRNQKPEVRKAQREQAIR 110
>UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6;
Metazoa|Rep: 60S ribosomal protein L24 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 157
Score = 138 bits (333), Expect = 1e-31
Identities = 63/101 (62%), Positives = 74/101 (73%)
Frame = +1
Query: 4 GYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXX 183
GYKIYPGHG+ +VDGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE
Sbjct: 10 GYKIYPGHGRRYARVDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEVSK 69
Query: 184 XXXXXXXXXXXXIVGASLSDIMAKRNMKPEVRKAQREQAIK 306
I GASL++I+AKRN KPEVRKAQREQAI+
Sbjct: 70 KRTRRAVKFQRAITGASLAEILAKRNQKPEVRKAQREQAIR 110
>UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 143
Score = 104 bits (250), Expect = 2e-21
Identities = 51/84 (60%), Positives = 58/84 (69%)
Frame = +1
Query: 55 KTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGAS 234
K F FLN +CE A LMRRNPR+VTWTVLYR K KKG +EE + GAS
Sbjct: 7 KVFNFLNKRCERALLMRRNPREVTWTVLYRCKHKKGTQEEVSKKRTRRNIKFQRSVQGAS 66
Query: 235 LSDIMAKRNMKPEVRKAQREQAIK 306
L +I+AKRN KPEVRKAQREQAI+
Sbjct: 67 LDNILAKRNQKPEVRKAQREQAIR 90
>UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila
melanogaster|Rep: RH14088p - Drosophila melanogaster
(Fruit fly)
Length = 123
Score = 94.3 bits (224), Expect = 2e-18
Identities = 46/69 (66%), Positives = 52/69 (75%)
Frame = +1
Query: 100 MRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEVR 279
M+RNPRKVTWTVLYRRK +KG EEE IVGASL++I+AKRNMKPEVR
Sbjct: 1 MKRNPRKVTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEVR 60
Query: 280 KAQREQAIK 306
KAQR+QAIK
Sbjct: 61 KAQRDQAIK 69
>UniRef50_Q0ULI2 Cluster: Predicted protein; n=12;
Pezizomycotina|Rep: Predicted protein - Phaeosphaeria
nodorum (Septoria nodorum)
Length = 161
Score = 94.3 bits (224), Expect = 2e-18
Identities = 46/101 (45%), Positives = 57/101 (56%)
Frame = +1
Query: 4 GYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXX 183
G KIYPG GK ++ D K F F N K E+ L R+NPRK++WT LYRR KKG EE
Sbjct: 10 GQKIYPGKGKLYIRGDSKIFRFQNGKTESLFLQRKNPRKISWTTLYRRMHKKGISEEVAK 69
Query: 184 XXXXXXXXXXXXIVGASLSDIMAKRNMKPEVRKAQREQAIK 306
IVGASL I +R+ +PE R A R A++
Sbjct: 70 KRTRRTVKHQRAIVGASLDVIKERRSQRPEARAAARSAAVQ 110
>UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 155
Score = 93.1 bits (221), Expect = 5e-18
Identities = 46/101 (45%), Positives = 58/101 (57%)
Frame = +1
Query: 4 GYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXX 183
G KIYPG G V+ D K F F NSK + R+NPR++ WTVL+R+ KKG EE
Sbjct: 10 GAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKKGITEEVAK 69
Query: 184 XXXXXXXXXXXXIVGASLSDIMAKRNMKPEVRKAQREQAIK 306
I GASL I +R++KPEVRKA RE+ +K
Sbjct: 70 KRSRKTVKAQRPITGASLDLIKERRSLKPEVRKANREEKLK 110
>UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4;
Bilateria|Rep: 60S ribosomal protein L24 -
Caenorhabditis elegans
Length = 159
Score = 92.3 bits (219), Expect = 9e-18
Identities = 48/104 (46%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Frame = +1
Query: 4 GYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK---GQEEE 174
GYKI+PGHGK +V+ DGK FL+ K +RRNPR + WTVLYR K KK GQE+
Sbjct: 10 GYKIHPGHGKRLVRTDGKVQIFLSGKALKGAKLRRNPRDIRWTVLYRIKNKKGTHGQEQV 69
Query: 175 XXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEVRKAQREQAIK 306
+ G SL I+AKRN + R+ QREQA K
Sbjct: 70 TRKKTKKSVQVVNRAVAGLSLDAILAKRNQTEDFRRQQREQAAK 113
>UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22;
Viridiplantae|Rep: 60S ribosomal protein L24-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 164
Score = 77.8 bits (183), Expect = 2e-13
Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = +1
Query: 4 GYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK-GQEEEXX 180
G KIYPG G ++ D + F FLNSKC+ + P K+ WT +YR++ KK +E
Sbjct: 12 GQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKKDAAQEAVK 71
Query: 181 XXXXXXXXXXXXXIVGASLSDIMAKRNMKPEVRKAQREQAIK 306
IVGA+L I KR KPEVR A RE A++
Sbjct: 72 RRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113
>UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L24 -
Dictyostelium discoideum AX4
Length = 127
Score = 76.2 bits (179), Expect = 6e-13
Identities = 38/98 (38%), Positives = 52/98 (53%)
Frame = +1
Query: 7 YKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXX 186
+KIYP G V+ D K F F+N+K E+ + NPR + W+++YRR +K +
Sbjct: 11 FKIYPARGMKFVRGDSKVFHFINTKVESLFFRKINPRDIRWSMVYRRIYKNTTTDVSAKK 70
Query: 187 XXXXXXXXXXXIVGASLSDIMAKRNMKPEVRKAQREQA 300
IVGASL I KR KPEV++A EQA
Sbjct: 71 KARKTKKVERNIVGASLEVIQQKRAQKPEVKQAAAEQA 108
>UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=7; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_177,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 162
Score = 70.5 bits (165), Expect = 3e-11
Identities = 36/100 (36%), Positives = 52/100 (52%)
Frame = +1
Query: 7 YKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXX 186
++IYPGHG+ V DG+ F +LN K A + +++ WTV +RR KK + +E
Sbjct: 13 WRIYPGHGRRFVAKDGRLFYYLNQKSRAFSARKIKSQEIQWTVAWRRLNKKIKTDEGAKK 72
Query: 187 XXXXXXXXXXXIVGASLSDIMAKRNMKPEVRKAQREQAIK 306
IVG SL +I +R + RKAQ EQA +
Sbjct: 73 RRIRNLKVQRAIVGISLEEIRRRRKEDEKTRKAQAEQAAR 112
>UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L24e containing protein - Tetrahymena
thermophila SB210
Length = 158
Score = 68.5 bits (160), Expect = 1e-10
Identities = 32/100 (32%), Positives = 53/100 (53%)
Frame = +1
Query: 7 YKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXX 186
Y+IYPG G+ + DG+ F FL K + L + +K+TWT+ RR +KK + +
Sbjct: 13 YRIYPGRGQRFIAKDGRGFFFLTKKAKCLSLRKVKAQKITWTIARRRLWKKVKATDIAQK 72
Query: 187 XXXXXXXXXXXIVGASLSDIMAKRNMKPEVRKAQREQAIK 306
IVG SL +I ++N+ +KA+ E+A++
Sbjct: 73 KKKRNVTVARAIVGISLEEINRRKNLDASHKKAEAEKAVR 112
>UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes
vannus|Rep: Ribosomal protein L24 - Euplotes vannus
Length = 155
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/95 (33%), Positives = 47/95 (49%)
Frame = +1
Query: 7 YKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXX 186
YK+YPG G V+ DG+TF FL+ K + H + +TWT ++RRK +KG +
Sbjct: 13 YKVYPGRGHRFVRKDGRTFFFLSRKTRSLHFQKVKTSDLTWTPMWRRKNRKGAYAKAARV 72
Query: 187 XXXXXXXXXXXIVGASLSDIMAKRNMKPEVRKAQR 291
+VG SL++I RN + R R
Sbjct: 73 RTKRTTRKMKAVVGMSLAEINRIRNQGTKERDEMR 107
>UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L24, putative -
Theileria parva
Length = 159
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/85 (36%), Positives = 43/85 (50%)
Frame = +1
Query: 7 YKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXX 186
Y++YPG GK V DGK + F+N K A H + P K+ W + +R+ KK Q E
Sbjct: 22 YRVYPGRGKKFVARDGKVYFFINGKSAAFHKRKVKPAKLKWNLAWRKANKKFQTELFNRK 81
Query: 187 XXXXXXXXXXXIVGASLSDIMAKRN 261
IVG SL D+ +KR+
Sbjct: 82 RSKKTSRPQKAIVGLSLDDLKSKRS 106
>UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanococcus jannaschii
Length = 70
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = +1
Query: 4 GYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLY---RRKFKKGQEEE 174
GY+I PG GK +V+ DG F +SKCE ++ M RNPRK+ WT +Y + + KK QE +
Sbjct: 11 GYEIEPGKGKMVVEKDGTVLYFCSSKCEKSYRMGRNPRKLKWTKVYQDMKAELKKAQESQ 70
>UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L24 - Entamoeba histolytica HM-1:IMSS
Length = 163
Score = 60.1 bits (139), Expect = 4e-08
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +1
Query: 4 GYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEE 174
G+KI G+ V++D K+FTF+N K L + NPRKV WT +YR+ KKGQ+ E
Sbjct: 12 GFKIPVAKGRKYVRLDLKSFTFINKKSLMQFLRKTNPRKVFWTAIYRQLNKKGQQNE 68
>UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3;
cellular organisms|Rep: 60S ribosomal protein L24 -
Entamoeba histolytica HM-1:IMSS
Length = 179
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = +1
Query: 4 GYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 144
G IYPGHG V+ D K F F SKC + M+RNPRK WT YR
Sbjct: 10 GANIYPGHGMMFVRNDAKVFWFCRSKCHKSFKMKRNPRKFKWTKAYR 56
>UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;
cellular organisms|Rep: Ribosome biogenesis protein
rlp24 - Schizosaccharomyces pombe (Fission yeast)
Length = 192
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/49 (51%), Positives = 29/49 (59%)
Frame = +1
Query: 13 IYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 159
+YPGHG V+ D K F F SKC M+RNPRKV WT YR+ K
Sbjct: 13 VYPGHGIMFVRNDSKVFRFCRSKCHKNFKMKRNPRKVAWTKAYRKAHGK 61
>UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L24 -
Cryptosporidium parvum Iowa II
Length = 202
Score = 56.4 bits (130), Expect = 5e-07
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = +1
Query: 13 IYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 147
IYPGHG T V+ D K F F SKC M+ NPRK WT YR+
Sbjct: 18 IYPGHGVTFVRNDAKIFRFCRSKCHRHFKMKHNPRKSKWTKAYRK 62
>UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein
RLP24; n=10; Coelomata|Rep: Probable ribosome biogenesis
protein RLP24 - Drosophila melanogaster (Fruit fly)
Length = 191
Score = 56.4 bits (130), Expect = 5e-07
Identities = 24/46 (52%), Positives = 28/46 (60%)
Frame = +1
Query: 10 KIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 147
KIYPGHG V+ D K F F KC A ++NPRKV WT YR+
Sbjct: 12 KIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRK 57
>UniRef50_O22165 Cluster: Probable ribosome biogenesis protein
RLP24; n=3; core eudicotyledons|Rep: Probable ribosome
biogenesis protein RLP24 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 159
Score = 56.0 bits (129), Expect = 7e-07
Identities = 25/54 (46%), Positives = 30/54 (55%)
Frame = +1
Query: 13 IYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEE 174
IYPGHG V+ D K F F SKC M+RNPRKV WT +R K ++
Sbjct: 13 IYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHGKDMTKD 66
>UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 199
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/44 (52%), Positives = 27/44 (61%)
Frame = +1
Query: 16 YPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 147
YPGHG V+ D K F F SKC A RRNPRK+ WT +R+
Sbjct: 14 YPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRK 57
>UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 198
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/44 (52%), Positives = 27/44 (61%)
Frame = +1
Query: 16 YPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 147
YPGHG V+ D K F F SKC A RRNPRK+ WT +R+
Sbjct: 14 YPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRK 57
>UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=2;
Plasmodium (Vinckeia)|Rep: 60S ribosomal protein L24,
putative - Plasmodium chabaudi
Length = 130
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/100 (30%), Positives = 48/100 (48%)
Frame = +1
Query: 7 YKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXX 186
Y+IYPG G+ + DGK + +L+SK + L ++ K+ WT +RR KK + E
Sbjct: 18 YRIYPGRGQKYIAKDGKVYFYLSSKFASLALQKKKAAKLRWTQTWRRNNKKTKVEATQRR 77
Query: 187 XXXXXXXXXXXIVGASLSDIMAKRNMKPEVRKAQREQAIK 306
+ G S+ DI RN K V+ + + + K
Sbjct: 78 RYKKTIKVQKAVCGLSVEDI---RNRKAYVQSIEAKVSFK 114
>UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative;
n=2; Theileria|Rep: 60S ribosomal protein L24/L30,
putative - Theileria annulata
Length = 187
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/45 (51%), Positives = 26/45 (57%)
Frame = +1
Query: 13 IYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 147
IYPGHG V+ D K F F SKC + NPRK+ WT YRR
Sbjct: 13 IYPGHGIVFVRNDSKIFRFCRSKCHRHFKAKHNPRKIKWTKAYRR 57
>UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 213
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = +1
Query: 13 IYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 159
IYPGHG ++ D + F F SKC + NPRKV WT +YR++ K
Sbjct: 13 IYPGHGIHFIRNDARVFRFCRSKCHKHFKAKHNPRKVKWTKIYRKERNK 61
>UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2;
Deuterostomia|Rep: 60S ribosomal protein L24 -
Oikopleura dioica (Tunicate)
Length = 165
Score = 54.4 bits (125), Expect = 2e-06
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = +1
Query: 13 IYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 159
+YPGHG V+ D K F F +KC ++NPRK+ WT YR+ K
Sbjct: 13 VYPGHGTVFVRNDSKQFRFCTAKCNKMFKKKKNPRKIKWTKAYRKAHGK 61
>UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2;
Cryptosporidium|Rep: Ribosomal protein L24e -
Cryptosporidium hominis
Length = 133
Score = 54.4 bits (125), Expect = 2e-06
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +1
Query: 7 YKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK-GQEEEXXX 183
Y+IYPG G+ V DG+ TFLN KC + + P K+ W+V +RR KK +
Sbjct: 18 YRIYPGRGRKFVARDGRVSTFLNQKCASLFHQKIRPVKLKWSVGWRRMNKKLTNQGATSK 77
Query: 184 XXXXXXXXXXXXIVGASLSDIMAKRNMKPEVRKAQREQAI 303
I G SL DI KR A ++ A+
Sbjct: 78 RRNKKTVRLHKAIEGLSLDDIKQKRAQNQSNSGAAQKAAL 117
>UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830167A21
product:Similar to 60S ribosomal protein L30 isolog,
full insert sequence; n=3; Murinae|Rep: Bone marrow
macrophage cDNA, RIKEN full-length enriched library,
clone:I830167A21 product:Similar to 60S ribosomal
protein L30 isolog, full insert sequence - Mus musculus
(Mouse)
Length = 171
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/45 (51%), Positives = 27/45 (60%)
Frame = +1
Query: 13 IYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 147
IYPGHG V+ D K F F SKC +RNPRKV WT +R+
Sbjct: 13 IYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein
RLP24; n=35; Euteleostomi|Rep: Probable ribosome
biogenesis protein RLP24 - Homo sapiens (Human)
Length = 163
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/45 (51%), Positives = 27/45 (60%)
Frame = +1
Query: 13 IYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 147
IYPGHG V+ D K F F SKC +RNPRKV WT +R+
Sbjct: 13 IYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 178
Score = 53.2 bits (122), Expect = 5e-06
Identities = 29/94 (30%), Positives = 45/94 (47%)
Frame = +1
Query: 7 YKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXX 186
Y+IYPG G+ + DGK + +L+SK + L ++ K+ WT +RR KK + E
Sbjct: 18 YRIYPGRGQKYIAKDGKVYFYLSSKFASLALQKKKAAKLRWTQTWRRNNKKTKVEATQRR 77
Query: 187 XXXXXXXXXXXIVGASLSDIMAKRNMKPEVRKAQ 288
+ G S+ DI RN K V+ +
Sbjct: 78 RYKKTIKVQKAVCGLSVEDI---RNRKAYVQSIE 108
>UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_154_26137_25568 - Giardia lamblia
ATCC 50803
Length = 189
Score = 52.4 bits (120), Expect = 9e-06
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +1
Query: 13 IYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 144
+YPG G V+ D + F F SKC M+RNPRKV WT YR
Sbjct: 14 VYPGKGICFVRNDSRVFRFCTSKCHRNFKMKRNPRKVRWTKTYR 57
>UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 181
Score = 52.4 bits (120), Expect = 9e-06
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = +1
Query: 16 YPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 147
YPG G T V+ D K F F SKC ++RNPRKV WT +R+
Sbjct: 14 YPGKGITFVRNDAKIFKFCKSKCHKNFKLKRNPRKVRWTKAFRK 57
>UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Eukaryota|Rep: Probable ribosome biogenesis
protein RLP24 - Dictyostelium discoideum (Slime mold)
Length = 164
Score = 52.4 bits (120), Expect = 9e-06
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +1
Query: 13 IYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 147
+YPGHG V+ D K F F SKC ++RNPRK WT +R+
Sbjct: 13 VYPGHGVMFVRNDCKQFRFCRSKCHKNFKLKRNPRKTRWTKAFRK 57
>UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24e,
putative - Trichomonas vaginalis G3
Length = 178
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +1
Query: 4 GYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 159
G I+PGHG V+ D K F F SKC + ++NPRK +WT +R K
Sbjct: 11 GGPIWPGHGTVYVRNDCKVFRFCKSKCRKFWMKKKNPRKFSWTKAFRAAMGK 62
>UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=1;
Babesia bovis|Rep: 60S ribosomal protein L24, putative -
Babesia bovis
Length = 192
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/49 (46%), Positives = 26/49 (53%)
Frame = +1
Query: 13 IYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 159
IYPGHG V+ D K F F SKC + NPRK+ WT RR K
Sbjct: 13 IYPGHGIVFVRNDSKIFRFCRSKCHKHFKAKHNPRKLKWTKAARRMHGK 61
>UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellular
organisms|Rep: 50S ribosomal protein L24e -
Archaeoglobus fulgidus
Length = 58
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 4 GYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYRR 147
GY I PG GK V+ DG+ F F + KCE L ++R PRK+ WT Y R
Sbjct: 10 GYDIEPGTGKMYVRRDGRVFYFCSGKCEKNMLKLKRKPRKLKWTKHYSR 58
>UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L24, putative -
Leishmania major
Length = 124
Score = 50.4 bits (115), Expect = 4e-05
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = +1
Query: 7 YKIYPGHGKTMVKV----DGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEE 174
+ ++PGHG+ V TF KC A ++ ++NPR + WT YRR +K +
Sbjct: 11 FAVHPGHGRRYVPFAFLSTKPVLTFSRPKCFALYMRKKNPRFIPWTRTYRRIHRKTTTDR 70
Query: 175 XXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEVRKAQ 288
IVGA LS I R + E R A+
Sbjct: 71 VNRRRAARAVRVQRAIVGADLSYIQEVRAARKEDRSAK 108
>UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, whole
genome shotgun sequence; n=4; Eukaryota|Rep: Chromosome
undetermined scaffold_52, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 171
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = +1
Query: 13 IYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 147
IYPGHG V+ D K F F SKC + NPRK WT +R+
Sbjct: 13 IYPGHGIVFVRNDSKMFRFCRSKCHRHFKAQHNPRKTRWTKAFRK 57
>UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4;
Eurotiomycetidae|Rep: 60S ribosomal protein L24b -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 188
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +1
Query: 13 IYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 144
+YP G T V+ D K+F F SKC A M+R PRK+ WT +R
Sbjct: 13 VYPSKGITFVRNDAKSFRFCRSKCHANFKMKRQPRKLKWTKTHR 56
>UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein
RLP24; n=1; Encephalitozoon cuniculi|Rep: Probable
ribosome biogenesis protein RLP24 - Encephalitozoon
cuniculi
Length = 155
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/49 (44%), Positives = 25/49 (51%)
Frame = +1
Query: 13 IYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 159
IY GHG V+ D K F F KC R NPRKV WT + R+ K
Sbjct: 13 IYQGHGTIYVRNDAKVFRFCRPKCRKLFARRVNPRKVKWTKISRKMANK 61
>UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_2_13062_12754 - Giardia lamblia ATCC
50803
Length = 102
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +1
Query: 4 GYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 147
G KI PG+GK M + D FLN K +L + NPRK+ WT+ RR
Sbjct: 11 GRKILPGYGKRMSRHDKVLLIFLNRKASVHYLNKWNPRKIRWTLASRR 58
>UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;
Ajellomyces capsulatus NAm1|Rep: Ribosome biogenesis
protein RLP24 - Ajellomyces capsulatus NAm1
Length = 191
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +1
Query: 16 YPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 144
YP G T V+ D +TF F SKC M+R PRK+ WT +R
Sbjct: 14 YPSKGITFVRNDARTFRFCRSKCHKNFKMKRQPRKLKWTKTHR 56
>UniRef50_Q17606 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Caenorhabditis|Rep: Probable ribosome
biogenesis protein RLP24 - Caenorhabditis elegans
Length = 162
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +1
Query: 13 IYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 147
IYPGHG V+ D F F S+C ++NPRK+ +T RR
Sbjct: 13 IYPGHGIQFVRNDSTVFKFCRSRCNKLFKKKKNPRKLRFTKAARR 57
>UniRef50_Q8TVE8 Cluster: 50S ribosomal protein L24e; n=5;
Archaea|Rep: 50S ribosomal protein L24e - Methanopyrus
kandleri
Length = 68
Score = 43.2 bits (97), Expect = 0.005
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 4 GYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYR 144
G I PG GK VK DG F +SKCE L + R+P+KV WT +R
Sbjct: 11 GRIIEPGTGKMFVKNDGTILWFCSSKCERNMLKLGRDPKKVRWTEKHR 58
>UniRef50_Q8PU76 Cluster: 50S ribosomal protein L24e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 62
Score = 42.3 bits (95), Expect = 0.010
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +1
Query: 4 GYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 159
G + PG GK +K DG T+ +SKC + + R PR+ WT + + KK
Sbjct: 10 GQMLEPGTGKLYIKKDGSTYFMCSSKCMSNFALGRLPRRTEWTEKGKIQLKK 61
>UniRef50_A2DJQ1 Cluster: Ribosomal protein L24e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24e,
putative - Trichomonas vaginalis G3
Length = 113
Score = 41.1 bits (92), Expect = 0.022
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 4 GYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 159
G+ + GHG+ ++ D F + K +RNPRK+ WT YR KK
Sbjct: 12 GHIFHAGHGRVHIREDKHLMAFESRKAFRMWERKRNPRKIAWTEHYRHDHKK 63
>UniRef50_A2ZTR3 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 202
Score = 38.3 bits (85), Expect = 0.16
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +1
Query: 61 FTFLNSKCEAAHLMRRNPRKVTWTVLYR 144
F F SKC M+RNPRKV WT YR
Sbjct: 67 FRFCRSKCHKNFKMKRNPRKVKWTKAYR 94
>UniRef50_P14116 Cluster: 50S ribosomal protein L24e; n=6;
Halobacteriaceae|Rep: 50S ribosomal protein L24e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 67
Score = 36.7 bits (81), Expect = 0.48
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +1
Query: 4 GYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 171
G I PG G V DG T F +SKCE + R R + WT R + + ++E
Sbjct: 11 GTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTARGEAGEAEDE 66
>UniRef50_A3H7X1 Cluster: Ribosomal protein L24E; n=2;
Thermoproteaceae|Rep: Ribosomal protein L24E -
Caldivirga maquilingensis IC-167
Length = 70
Score = 35.9 bits (79), Expect = 0.83
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 4 GYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYRRKFKKGQEE 171
G I PG+G V+VDG F + +C + + M +NP+K W RR Q +
Sbjct: 10 GRPIPPGYGIMYVRVDGVVLRFCSRRCFVSMVKMGKNPQKQAWVRKIRRAKSAAQSK 66
>UniRef50_Q4XNU9 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 95
Score = 35.1 bits (77), Expect = 1.5
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -3
Query: 639 FFFFFTLLKKISTFIFFYFFCLLLR*NKRFLTSWCFTFFLHILTNCLSIF 490
FFF LLK IS++ + C+ R LT++CF FFL ++ IF
Sbjct: 17 FFFSIRLLKVISSYFVLVYMCIPYR--YILLTTFCFCFFLVLVLYFFYIF 64
>UniRef50_A7DR44 Cluster: Ribosomal protein L24E; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L24E - Candidatus Nitrosopumilus maritimus SCM1
Length = 66
Score = 34.7 bits (76), Expect = 1.9
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 22 GHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLY 141
G G + K DG F ++KC+ L ++R+PRK WT Y
Sbjct: 18 GSGTMLAKNDGTVLWFCSAKCKKNALELKRDPRKFKWTKKY 58
>UniRef50_Q9AVV9 Cluster: 60S ribosomal protein L24; n=1; Guillardia
theta|Rep: 60S ribosomal protein L24 - Guillardia theta
(Cryptomonas phi)
Length = 106
Score = 34.3 bits (75), Expect = 2.5
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 4 GYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 147
G IYPGHG V F F ++KC+ + + + + WT+ + +
Sbjct: 8 GIGIYPGHGSMFVTNKFDKFYFCSTKCKKLKKIGKTNKGLKWTIKFSK 55
>UniRef50_Q4DSX9 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 616
Score = 34.3 bits (75), Expect = 2.5
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3
Query: 639 FFFFFTLLKKISTFIFFYFFC 577
FFFFF L S F FF+FFC
Sbjct: 48 FFFFFLLFSSFSRFPFFFFFC 68
>UniRef50_Q00UQ8 Cluster: Chromosome 15 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 15 contig 1, DNA
sequence - Ostreococcus tauri
Length = 172
Score = 33.9 bits (74), Expect = 3.4
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 220 IVGASLSDIMAKRNMKPEVRKAQREQAIK 306
+VGASL + KR KPEVR A RE A++
Sbjct: 128 LVGASLEVLAKKRQEKPEVRAAAREAALR 156
>UniRef50_A0RUB6 Cluster: Ribosomal protein L24E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24E - Cenarchaeum
symbiosum
Length = 65
Score = 33.5 bits (73), Expect = 4.4
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 22 GHGKTMVKVDGKTFTFLNSKCEA-AHLMRRNPRKVTWTVLY 141
G G K DG F +SKC +++R+PRK WT Y
Sbjct: 18 GSGTMFAKNDGTVMWFCSSKCRKNMTVLKRDPRKFKWTGKY 58
>UniRef50_Q55BQ0 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 165
Score = 32.7 bits (71), Expect = 7.7
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -3
Query: 639 FFFFFTLLKKISTFIFFYFFCLLLR*NKRFLTSWCFTF 526
FFFFF F FF+FF ++LR S+CFTF
Sbjct: 53 FFFFFFFFFFFFFFFFFFFFYMILR---GLNWSFCFTF 87
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,921,841
Number of Sequences: 1657284
Number of extensions: 9944651
Number of successful extensions: 21065
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 20185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20861
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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