Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0207
(773 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 34 0.020
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 30 0.42
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.56
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 29 0.74
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 29 0.74
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.74
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 29 0.74
SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces pom... 29 0.98
SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor Fep1|Sc... 27 2.3
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 3.0
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 26 5.2
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 26 5.2
SPBC1604.07 |atp4||F0-ATPase subunit|Schizosaccharomyces pombe|c... 26 5.2
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 5.2
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.9
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 6.9
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 26 6.9
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 26 6.9
SPAC6F12.11c |sfc1||transcription factor TFIIIC complex A box as... 26 6.9
SPBC3E7.15c |mug83|SPBC4F6.02c|sphingosine N-acyltransferase Lac... 25 9.1
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 25 9.1
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 25 9.1
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 9.1
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac... 25 9.1
SPAPJ696.02 |||actin cortical patch component Lsb4 |Schizosaccha... 25 9.1
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 25 9.1
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 34.3 bits (75), Expect = 0.020
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Frame = +2
Query: 572 SDERSSPLQMSPTPAKSNADAIIT-SSASKLSYTP------TSLSSHTETKETSSFKPSI 730
S E S P ++S P SN + I+ SSAS L TP T+L S ++ ++S F S+
Sbjct: 451 SYEHSEPFKVSSVPLTSNNFSSISHSSASSLPITPSSYLSNTTLHSSVQSSQSSQFTVSV 510
Query: 731 PVDVVRFS 754
P +S
Sbjct: 511 PSSTQSYS 518
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 29.9 bits (64), Expect = 0.42
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 542 PANRKTPS-EKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETS-S 715
P+N T ++S S+ L ++NA A +S + + +P + S + TK + S
Sbjct: 45 PSNHATEELQQSSTNSTTLPTQEAAVETNASASHETSFALPTTSPAASLSISPTKSAAVS 104
Query: 716 FKPSIPVDVVRFSRRPAS 769
+P++ DV S PA+
Sbjct: 105 SEPNVEADVKSLSSTPAA 122
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.5 bits (63), Expect = 0.56
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 563 SEKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSSFKPS 727
S S SS L S + S+ + TSS+S +S + +S SS + + TSS K S
Sbjct: 311 SSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSS 365
Score = 26.2 bits (55), Expect = 5.2
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 539 PPANRKTPSE-KSDERSSPLQMSPT--PAKSNADAIITSSASKLSYTPTSLSSHTETKET 709
P ++ TPS +S P +S P+ ++ + I+SS+ S TS + + + T
Sbjct: 123 PTSSEYTPSSTESSSLLDPSSVSSAILPSSTSVEVSISSSSLSSSDPLTSSTFSSLSSST 182
Query: 710 SSFKPSI 730
SS +PS+
Sbjct: 183 SSSQPSV 189
Score = 25.4 bits (53), Expect = 9.1
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +2
Query: 542 PANRKTPSEKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSSFK 721
PA + PS S SP TP+ + + +++ S+ + P+S S +SS
Sbjct: 109 PATSQLPSSTSF--FSPTSSEYTPSSTESSSLLDPSSVSSAILPSSTSVEVSI-SSSSLS 165
Query: 722 PSIPVDVVRFSRRPAS 769
S P+ FS +S
Sbjct: 166 SSDPLTSSTFSSLSSS 181
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 29.1 bits (62), Expect = 0.74
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 545 ANRKTPSEKSDERSSPLQMSPTPAKS-NADAIITSSASKLSYTPTSLSSHTETK 703
AN+ T + + + + L + P + + I SS +K+S PT+LSS E K
Sbjct: 475 ANKPTSEQTAQQDNKALFVKPERSSTVTIRKPIESSTNKISENPTTLSSKVENK 528
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 29.1 bits (62), Expect = 0.74
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -1
Query: 482 VFEELPFDERGDLA*VFTEA--LSSGVLVFSLEVKHDS*GLKLGLLSVCIGLSSYFLLAF 309
V E P R A V T L + ++ F +++ G KLG + CI L S F++ F
Sbjct: 391 VGETFPIRYRSKCASVATSGNWLGNFMISFFTPFINNAIGFKLGYIYACINLFSSFMIFF 450
Query: 308 SAAE 297
A E
Sbjct: 451 LAKE 454
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 29.1 bits (62), Expect = 0.74
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +2
Query: 557 TPSEKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSS 688
TPS S SS S TP S+ + I+SSAS S + +S SS
Sbjct: 148 TPSSSSTTSSSSSSSSSTPISSSITSSISSSASS-SVSSSSASS 190
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 29.1 bits (62), Expect = 0.74
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +2
Query: 584 SSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSSFK 721
SS S T ++SN+++ TSSASK S + TSL K S +
Sbjct: 996 SSSTIPSSTRSESNSESASTSSASKRSSSSTSLVQSNPVKTVVSLE 1041
>SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1325
Score = 28.7 bits (61), Expect = 0.98
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +2
Query: 563 SEKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSSFKPSIPVDV 742
+EK++E + + T AK N + + S K S S + + ETS KPS+ +
Sbjct: 783 NEKAEESNETKGFNTTIAKQNDKS--SKSEGKASVANMSALNKSTNNETSDSKPSLKSPL 840
Query: 743 VRFS 754
FS
Sbjct: 841 FNFS 844
>SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor
Fep1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 564
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 557 TPSEKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETS-SFKPSI 730
+P+ S S+ + SPTP +S + ++ + T SSH + +++S +PS+
Sbjct: 111 SPNPSSVPSSTETKASPTPLESKPQIVSDTTTETSNGTSRRRSSHNQHEDSSPPHEPSV 169
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 27.1 bits (57), Expect = 3.0
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +2
Query: 542 PANRKT-PSEKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSSF 718
P+N P + ++ ++S + S T AK DA +++ + + T + S+HT+T TS+
Sbjct: 136 PSNASVFPIKPTESKTSTTKDSET-AKEEDDASSSTTKAVEATTSKASSAHTDTLATSAS 194
Query: 719 K----PSIPVDVVRFSRRPAS 769
S P VV+ +R S
Sbjct: 195 NSDRGASTPEMVVKAEKREGS 215
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 26.2 bits (55), Expect = 5.2
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 539 PPANRKTPSEKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSSF 718
P ++ PS S S P +SP PA++ + + + P+ LS+ +SSF
Sbjct: 308 PNLSQMGPSHSS---SVPSNLSPNPAQNENPSTTSIPSINNQPFPSGLSASNSNFASSSF 364
Query: 719 KP-SIP 733
P S+P
Sbjct: 365 IPQSVP 370
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.2 bits (55), Expect = 5.2
Identities = 15/60 (25%), Positives = 23/60 (38%)
Frame = +2
Query: 563 SEKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSSFKPSIPVDV 742
S KSD S P PA + ++K ++ T ++ T+ T K DV
Sbjct: 899 SSKSDAAKSIKPQKPEPALKPVEGTADPKSTKRNHQETEKTADTDVSSTEPVKRQKTADV 958
>SPBC1604.07 |atp4||F0-ATPase subunit|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2
Query: 481 CLKSFPSTKEVIWREYLQKLCLPGFLSFLSKSNTIRK 371
CL+SFPS + W Q+L LP F T K
Sbjct: 7 CLRSFPSVQRTAW----QRLVLPSTRKFSLTPTTFDK 39
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 539 PPANRKTPSEKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLS 685
P AN + + SPL P S ++II+ +S SY P ++
Sbjct: 771 PAANTRNAIIREPGILSPLSPRVQPVLSRRESIISMGSSASSYVPLEIA 819
Score = 25.4 bits (53), Expect = 9.1
Identities = 18/55 (32%), Positives = 22/55 (40%)
Frame = +1
Query: 217 DAKKSPLALLAQTCSAIGADAPNPKLISAAEKASKKYDDKPIHTDNKPSFKPYES 381
D SPL+ T D L SAA + +P T +KPS P ES
Sbjct: 444 DISSSPLS---PTEDLFPNDPEEENLFSAALGLNSNTGSQPSETQSKPSIDPSES 495
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 620 IWPAWATFEEDSTFRLTFPTAF 555
+WP W FE F LT P AF
Sbjct: 2050 VWPPWVPFETTFDFVLT-PAAF 2070
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 25.8 bits (54), Expect = 6.9
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +1
Query: 151 NMLTSSNQYLRPDYLSPLPTTLDAKKSPLALL--AQTCSAIGAD-APNPKLISAAEKASK 321
N+ + RP + P+PT++ + SPL+ + T + +D P P + S +A
Sbjct: 408 NLPSYPTNLARPKAIKPMPTSIHGQTSPLSPIPPVHTTHGLVSDIRPLPSVSSPIMRA-- 465
Query: 322 KYDDKPI--HTDNKPSFKP 372
D PI + PSF P
Sbjct: 466 --DSTPISHNLAVTPSFSP 482
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 25.8 bits (54), Expect = 6.9
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -1
Query: 482 VFEELPFDERGDLA*VFTEA--LSSGVLVFSLEVKHDS*GLKLGLLSVCIGLSSYFLLAF 309
V E P R A V T L + ++ F +S G KLG + CI ++S F +
Sbjct: 391 VGETFPIRYRSKCAAVATSGNWLGNFMVSFFTPFISNSIGFKLGYIYACINMTSAFQIFL 450
Query: 308 SAAE 297
A E
Sbjct: 451 MAKE 454
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 626 ADAIITSSASKLSYTPTSLSSHTETKETSS 715
ADA+ S+A + +P+ +S T T TSS
Sbjct: 451 ADALNDSTARRTQSSPSGTNSSTSTSSTSS 480
>SPAC6F12.11c |sfc1||transcription factor TFIIIC complex A box
associated subunit Sfc1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 456
Score = 25.8 bits (54), Expect = 6.9
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +3
Query: 552 AKRRRKSQTKGRVLFKCRP---RRPNQTQTQLSLHLLPSYRIHLLLCRPTLKPKKLQASS 722
+K S+T V+ +P +RP T+ L HL PSY +L P L
Sbjct: 209 SKLGEPSKTIQEVIEALKPLFEKRPVWTRRALLNHLDPSYTHYLKFALPYL--------- 259
Query: 723 PAYLWTSSAF 752
+YLWTS F
Sbjct: 260 -SYLWTSGPF 268
>SPBC3E7.15c |mug83|SPBC4F6.02c|sphingosine N-acyltransferase
Lac1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 384
Score = 25.4 bits (53), Expect = 9.1
Identities = 8/33 (24%), Positives = 16/33 (48%)
Frame = -1
Query: 671 VYTITWKQMK**LRLRLIWPAWATFEEDSTFRL 573
++ W M+ L +++W W T ++F L
Sbjct: 282 IFVFVWIYMRHYLNFKIMWAVWGTMRTINSFDL 314
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 25.4 bits (53), Expect = 9.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 623 NADAIITSSASKLSYTPTSLSSHTET 700
NADA++TS AS+L T + T +
Sbjct: 442 NADAVVTSLASRLGVKKTDILDPTSS 467
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 25.4 bits (53), Expect = 9.1
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 584 SSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSSFKPSIP 733
SSP +S T + + + I+SS S S+T S S + +++ ++P
Sbjct: 139 SSPSAVSSTTSIPSISSTISSSVSTSSFTSLSSSGFSTVLSSTNTTSALP 188
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 9.1
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 432 YRSSVFRGSCLFSRSQTRFVRFETGLVVGM 343
+ SS F G C+++ Q+RF R +++GM
Sbjct: 846 FGSSCFEGECVYTYIQSRFYR-SPEVILGM 874
>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 25.4 bits (53), Expect = 9.1
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 584 SSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSSF 718
S+PL SP P++ + A+ YTP +SS + ++ SSF
Sbjct: 550 SAPLCSSPVPSRR-----YSQYATNARYTPRKVSSGSVLRKISSF 589
>SPAPJ696.02 |||actin cortical patch component Lsb4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 25.4 bits (53), Expect = 9.1
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +2
Query: 563 SEKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSSFKPSIP 733
S K D R S +P+P +S + + + S T SS ++ + KPS P
Sbjct: 303 SSKMDNRRSKYADTPSPRRSRSYSDEDEESVYSSDVSTESSSQFSSRSSEYSKPSRP 359
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.4 bits (53), Expect = 9.1
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +2
Query: 584 SSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSSFKPSIPVDVVRFSRRP 763
S+P Q++P A + + + S TP+S+++HT + + +P+ F
Sbjct: 226 SNPPQLAPATAIAPSSQSSQHKSVNYSVTPSSINNHTAVPLSPTLAVWLPMTQPTFQPPS 285
Query: 764 ASL 772
A++
Sbjct: 286 ANV 288
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,332,110
Number of Sequences: 5004
Number of extensions: 71287
Number of successful extensions: 322
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 322
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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