Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0207
(773 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007494-1|AAH07494.1| 283|Homo sapiens ZNF503 protein protein. 58 5e-08
BC021165-1|AAH21165.1| 609|Homo sapiens ZNF503 protein protein. 57 8e-08
BC013011-1|AAH13011.1| 609|Homo sapiens ZNF503 protein protein. 57 8e-08
BC011625-1|AAH11625.1| 646|Homo sapiens zinc finger protein 503... 57 8e-08
BC032534-1|AAH32534.1| 590|Homo sapiens zinc finger protein 703... 52 3e-06
AK024361-1|BAB14897.1| 590|Homo sapiens protein ( Homo sapiens ... 52 3e-06
BC084581-1|AAH84581.1| 163|Homo sapiens ZNF703 protein protein. 45 3e-04
D28588-1|BAA05923.2| 627|Homo sapiens KIAA0048 protein. 38 0.030
BC033814-1|AAH33814.1| 606|Homo sapiens Sp2 transcription facto... 38 0.030
BC016680-1|AAH16680.1| 606|Homo sapiens Sp2 transcription facto... 38 0.030
BC005914-1|AAH05914.1| 249|Homo sapiens SP2 protein protein. 38 0.030
D21260-1|BAA04801.2| 1685|Homo sapiens KIAA0034 protein. 37 0.093
BC054489-1|AAH54489.1| 1675|Homo sapiens clathrin, heavy chain (... 37 0.093
BC051800-1|AAH51800.1| 1639|Homo sapiens CLTC protein protein. 37 0.093
Z15025-1|CAA78744.1| 1870|Homo sapiens Bat2 protein. 33 0.86
BX511262-1|CAI95572.1| 2157|Homo sapiens HLA-B associated transc... 33 0.86
BC126414-1|AAI26415.1| 781|Homo sapiens Sp3 transcription facto... 33 0.86
BC060668-1|AAH60668.1| 2157|Homo sapiens HLA-B associated transc... 33 0.86
BC042295-1|AAH42295.1| 2157|Homo sapiens BAT2 protein protein. 33 0.86
BA000025-31|BAB63391.1| 2157|Homo sapiens BAT2 protein. 33 0.86
AL805934-4|CAI18500.1| 2157|Homo sapiens HLA-B associated transc... 33 0.86
AL662847-63|CAI17698.2| 2157|Homo sapiens HLA-B associated trans... 33 0.86
AJ310752-1|CAC34575.1| 100|Homo sapiens transcription factor SP... 33 0.86
AF494280-1|AAM12875.1| 135|Homo sapiens GC-binding transcriptio... 33 0.86
AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein. 33 0.86
AB210034-1|BAE06116.1| 1537|Homo sapiens C6orf21 variant protein... 33 0.86
BC111692-1|AAI11693.1| 620|Homo sapiens SR140 protein protein. 33 1.1
BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for IM... 33 1.1
AB002330-1|BAA20790.1| 1028|Homo sapiens KIAA0332 protein. 33 1.1
M33518-1|AAA35586.1| 2142|Homo sapiens protein ( Human HLA-B-ass... 33 1.5
M33509-1|AAA35585.1| 2142|Homo sapiens protein ( Human HLA-B-ass... 33 1.5
AL662801-47|CAI18313.1| 2157|Homo sapiens HLA-B associated trans... 33 1.5
X68561-1|CAA48563.1| 784|Homo sapiens SPR-1 protein. 32 2.0
BC109300-1|AAI09301.1| 784|Homo sapiens Sp4 transcription facto... 32 2.0
BC038669-1|AAH38669.1| 466|Homo sapiens SP8 protein protein. 32 2.0
AY441957-1|AAR30505.1| 781|Homo sapiens transcription factor SP... 32 2.0
AY167047-1|AAO38028.1| 508|Homo sapiens specificity protein 8 l... 32 2.0
AK056857-1|BAB71297.1| 452|Homo sapiens protein ( Homo sapiens ... 32 2.0
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 32 2.0
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 32 2.0
BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein. 32 2.6
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 32 2.6
M74088-1|AAA03586.1| 2843|Homo sapiens APC protein. 31 4.6
M73548-2|AAA60354.1| 2743|Homo sapiens polyposis locus-encoded p... 31 4.6
M73548-1|AAA60353.1| 2844|Homo sapiens polyposis locus-encoded p... 31 4.6
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot... 31 4.6
AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein. 31 4.6
AB210001-1|BAE06083.1| 2845|Homo sapiens APC variant protein pro... 31 4.6
AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein. 31 4.6
AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein. 31 4.6
L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated pr... 30 8.0
BC131737-1|AAI31738.1| 144|Homo sapiens LOC653316 protein protein. 30 8.0
BC101341-1|AAI01342.1| 114|Homo sapiens hypothetical protein LO... 30 8.0
BC101340-1|AAI01341.1| 144|Homo sapiens LOC653316 protein protein. 30 8.0
BC101339-1|AAI01340.1| 144|Homo sapiens LOC653316 protein protein. 30 8.0
BC101338-1|AAI01339.1| 114|Homo sapiens hypothetical protein LO... 30 8.0
BC032579-1|AAH32579.1| 297|Homo sapiens orthodenticle homeobox ... 30 8.0
AF298117-1|AAG16243.1| 297|Homo sapiens homeobox protein OTX2 p... 30 8.0
AF093138-1|AAD31385.1| 289|Homo sapiens homeodomain protein OTX... 30 8.0
>BC007494-1|AAH07494.1| 283|Homo sapiens ZNF503 protein protein.
Length = 283
Score = 57.6 bits (133), Expect = 5e-08
Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 7/54 (12%)
Frame = +1
Query: 154 MLTS-SNQYLRPDYLSPLPTT------LDAKKSPLALLAQTCSAIGADAPNPKL 294
MLT+ + L P+YL PLP+T LDAKKSPLALLAQTCS IG P+P L
Sbjct: 79 MLTARTGHILHPEYLQPLPSTPVSPIELDAKKSPLALLAQTCSQIGKPDPSPSL 132
>BC021165-1|AAH21165.1| 609|Homo sapiens ZNF503 protein protein.
Length = 609
Score = 56.8 bits (131), Expect = 8e-08
Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Frame = +1
Query: 154 MLTS-SNQYLRPDYLSPLPTT------LDAKKSPLALLAQTCSAIGADAPNP--KLISAA 306
MLT+ + L P+YL PLP+T LDAKKSPLALLAQTCS IG P+P KL S A
Sbjct: 79 MLTARTGHILHPEYLQPLPSTPVSPIELDAKKSPLALLAQTCSQIGKPDPSPSSKLSSVA 138
>BC013011-1|AAH13011.1| 609|Homo sapiens ZNF503 protein protein.
Length = 609
Score = 56.8 bits (131), Expect = 8e-08
Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Frame = +1
Query: 154 MLTS-SNQYLRPDYLSPLPTT------LDAKKSPLALLAQTCSAIGADAPNP--KLISAA 306
MLT+ + L P+YL PLP+T LDAKKSPLALLAQTCS IG P+P KL S A
Sbjct: 79 MLTARTGHILHPEYLQPLPSTPVSPIELDAKKSPLALLAQTCSQIGKPDPSPSSKLSSVA 138
>BC011625-1|AAH11625.1| 646|Homo sapiens zinc finger protein 503
protein.
Length = 646
Score = 56.8 bits (131), Expect = 8e-08
Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Frame = +1
Query: 154 MLTS-SNQYLRPDYLSPLPTT------LDAKKSPLALLAQTCSAIGADAPNP--KLISAA 306
MLT+ + L P+YL PLP+T LDAKKSPLALLAQTCS IG P+P KL S A
Sbjct: 79 MLTARTGHILHPEYLQPLPSTPVSPIELDAKKSPLALLAQTCSQIGKPDPSPSSKLSSVA 138
>BC032534-1|AAH32534.1| 590|Homo sapiens zinc finger protein 703
protein.
Length = 590
Score = 51.6 bits (118), Expect = 3e-06
Identities = 32/55 (58%), Positives = 35/55 (63%), Gaps = 8/55 (14%)
Frame = +1
Query: 178 LRPDYLSPLPTT------LDAKKSPLALLAQTCSAIGADAPNP--KLISAAEKAS 318
L P+YL PL +T LDAKKSPLALLAQTCS IG P P KL S A A+
Sbjct: 64 LHPEYLQPLSSTPVSPIELDAKKSPLALLAQTCSQIGKPDPPPSSKLNSVAAAAN 118
>AK024361-1|BAB14897.1| 590|Homo sapiens protein ( Homo sapiens
cDNA FLJ14299 fis, clone PLACE1010310, weakly similar to
SPIDROIN 2. ).
Length = 590
Score = 51.6 bits (118), Expect = 3e-06
Identities = 32/55 (58%), Positives = 35/55 (63%), Gaps = 8/55 (14%)
Frame = +1
Query: 178 LRPDYLSPLPTT------LDAKKSPLALLAQTCSAIGADAPNP--KLISAAEKAS 318
L P+YL PL +T LDAKKSPLALLAQTCS IG P P KL S A A+
Sbjct: 64 LHPEYLQPLSSTPVSPIELDAKKSPLALLAQTCSQIGKPDPPPSSKLNSVAAAAN 118
>BC084581-1|AAH84581.1| 163|Homo sapiens ZNF703 protein protein.
Length = 163
Score = 45.2 bits (102), Expect = 3e-04
Identities = 24/38 (63%), Positives = 27/38 (71%), Gaps = 6/38 (15%)
Frame = +1
Query: 178 LRPDYLSPLPTT------LDAKKSPLALLAQTCSAIGA 273
L P+YL PL +T LDAKKSPLALLAQTCS G+
Sbjct: 64 LHPEYLQPLSSTPVSPIELDAKKSPLALLAQTCSQTGS 101
>D28588-1|BAA05923.2| 627|Homo sapiens KIAA0048 protein.
Length = 627
Score = 38.3 bits (85), Expect = 0.030
Identities = 20/32 (62%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +1
Query: 187 DYLSPLP-TTLDAKKSPLALLAQTCSAIGADA 279
DYL P TT D++ SPLALLA TCS IG A
Sbjct: 32 DYLQPAASTTQDSQPSPLALLAATCSKIGPPA 63
>BC033814-1|AAH33814.1| 606|Homo sapiens Sp2 transcription factor
protein.
Length = 606
Score = 38.3 bits (85), Expect = 0.030
Identities = 20/32 (62%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +1
Query: 187 DYLSPLP-TTLDAKKSPLALLAQTCSAIGADA 279
DYL P TT D++ SPLALLA TCS IG A
Sbjct: 11 DYLQPAASTTQDSQPSPLALLAATCSKIGPPA 42
>BC016680-1|AAH16680.1| 606|Homo sapiens Sp2 transcription factor
protein.
Length = 606
Score = 38.3 bits (85), Expect = 0.030
Identities = 20/32 (62%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +1
Query: 187 DYLSPLP-TTLDAKKSPLALLAQTCSAIGADA 279
DYL P TT D++ SPLALLA TCS IG A
Sbjct: 11 DYLQPAASTTQDSQPSPLALLAATCSKIGPPA 42
>BC005914-1|AAH05914.1| 249|Homo sapiens SP2 protein protein.
Length = 249
Score = 38.3 bits (85), Expect = 0.030
Identities = 20/32 (62%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +1
Query: 187 DYLSPLP-TTLDAKKSPLALLAQTCSAIGADA 279
DYL P TT D++ SPLALLA TCS IG A
Sbjct: 11 DYLQPAASTTQDSQPSPLALLAATCSKIGPPA 42
>D21260-1|BAA04801.2| 1685|Homo sapiens KIAA0034 protein.
Length = 1685
Score = 36.7 bits (81), Expect = 0.093
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +1
Query: 130 KDSGLWGNMLTSSNQYLRPDYLSPLPTTLDAKKSPLALLAQTCSAIGADAPNPKLISAAE 309
KD LWG++L SN Y RP + T L + P + + + AD PN +LI E
Sbjct: 961 KDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPN-ELIELLE 1019
Query: 310 K 312
K
Sbjct: 1020 K 1020
>BC054489-1|AAH54489.1| 1675|Homo sapiens clathrin, heavy chain (Hc)
protein.
Length = 1675
Score = 36.7 bits (81), Expect = 0.093
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +1
Query: 130 KDSGLWGNMLTSSNQYLRPDYLSPLPTTLDAKKSPLALLAQTCSAIGADAPNPKLISAAE 309
KD LWG++L SN Y RP + T L + P + + + AD PN +LI E
Sbjct: 951 KDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPN-ELIELLE 1009
Query: 310 K 312
K
Sbjct: 1010 K 1010
>BC051800-1|AAH51800.1| 1639|Homo sapiens CLTC protein protein.
Length = 1639
Score = 36.7 bits (81), Expect = 0.093
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +1
Query: 130 KDSGLWGNMLTSSNQYLRPDYLSPLPTTLDAKKSPLALLAQTCSAIGADAPNPKLISAAE 309
KD LWG++L SN Y RP + T L + P + + + AD PN +LI E
Sbjct: 951 KDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPN-ELIELLE 1009
Query: 310 K 312
K
Sbjct: 1010 K 1010
>Z15025-1|CAA78744.1| 1870|Homo sapiens Bat2 protein.
Length = 1870
Score = 33.5 bits (73), Expect = 0.86
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 539 PPANRKTPSEKSDE--RSSPLQMSPTPAKSNADAIITSSASKLSYTPTSL-SSHTETKET 709
PPA+ TP ++ +E ++ P Q +PTP + A +++ S S + S +S E +
Sbjct: 534 PPASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLP 593
Query: 710 SSFKPSIPVDV 742
S P P +V
Sbjct: 594 SKEGPEPPEEV 604
>BX511262-1|CAI95572.1| 2157|Homo sapiens HLA-B associated
transcript 2 protein.
Length = 2157
Score = 33.5 bits (73), Expect = 0.86
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 539 PPANRKTPSEKSDE--RSSPLQMSPTPAKSNADAIITSSASKLSYTPTSL-SSHTETKET 709
PPA+ TP ++ +E ++ P Q +PTP + A +++ S S + S +S E +
Sbjct: 535 PPASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLP 594
Query: 710 SSFKPSIPVDV 742
S P P +V
Sbjct: 595 SKEGPEPPEEV 605
>BC126414-1|AAI26415.1| 781|Homo sapiens Sp3 transcription factor
protein.
Length = 781
Score = 33.5 bits (73), Expect = 0.86
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = +1
Query: 124 LDKDSGLWGNMLTSSNQYLRPDY------LSPLPTTLDAKKSPLALLAQTCSAIGADAPN 285
LD DSG G +YL+ ++ D + SPLALLA TCS IG +P
Sbjct: 16 LDVDSGGGGGGGGGHGEYLQQQQQHGNGAVAAAAAAQDTQPSPLALLAATCSKIGPPSPG 75
Query: 286 PKLISAAEKA 315
AA A
Sbjct: 76 DDEEEAAAAA 85
>BC060668-1|AAH60668.1| 2157|Homo sapiens HLA-B associated
transcript 2 protein.
Length = 2157
Score = 33.5 bits (73), Expect = 0.86
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 539 PPANRKTPSEKSDE--RSSPLQMSPTPAKSNADAIITSSASKLSYTPTSL-SSHTETKET 709
PPA+ TP ++ +E ++ P Q +PTP + A +++ S S + S +S E +
Sbjct: 535 PPASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLP 594
Query: 710 SSFKPSIPVDV 742
S P P +V
Sbjct: 595 SKEGPEPPEEV 605
>BC042295-1|AAH42295.1| 2157|Homo sapiens BAT2 protein protein.
Length = 2157
Score = 33.5 bits (73), Expect = 0.86
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 539 PPANRKTPSEKSDE--RSSPLQMSPTPAKSNADAIITSSASKLSYTPTSL-SSHTETKET 709
PPA+ TP ++ +E ++ P Q +PTP + A +++ S S + S +S E +
Sbjct: 535 PPASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLP 594
Query: 710 SSFKPSIPVDV 742
S P P +V
Sbjct: 595 SKEGPEPPEEV 605
>BA000025-31|BAB63391.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 33.5 bits (73), Expect = 0.86
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 539 PPANRKTPSEKSDE--RSSPLQMSPTPAKSNADAIITSSASKLSYTPTSL-SSHTETKET 709
PPA+ TP ++ +E ++ P Q +PTP + A +++ S S + S +S E +
Sbjct: 535 PPASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLP 594
Query: 710 SSFKPSIPVDV 742
S P P +V
Sbjct: 595 SKEGPEPPEEV 605
>AL805934-4|CAI18500.1| 2157|Homo sapiens HLA-B associated
transcript 2 protein.
Length = 2157
Score = 33.5 bits (73), Expect = 0.86
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 539 PPANRKTPSEKSDE--RSSPLQMSPTPAKSNADAIITSSASKLSYTPTSL-SSHTETKET 709
PPA+ TP ++ +E ++ P Q +PTP + A +++ S S + S +S E +
Sbjct: 535 PPASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLP 594
Query: 710 SSFKPSIPVDV 742
S P P +V
Sbjct: 595 SKEGPEPPEEV 605
>AL662847-63|CAI17698.2| 2157|Homo sapiens HLA-B associated
transcript 2 protein.
Length = 2157
Score = 33.5 bits (73), Expect = 0.86
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 539 PPANRKTPSEKSDE--RSSPLQMSPTPAKSNADAIITSSASKLSYTPTSL-SSHTETKET 709
PPA+ TP ++ +E ++ P Q +PTP + A +++ S S + S +S E +
Sbjct: 535 PPASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLP 594
Query: 710 SSFKPSIPVDV 742
S P P +V
Sbjct: 595 SKEGPEPPEEV 605
>AJ310752-1|CAC34575.1| 100|Homo sapiens transcription factor SP3
protein.
Length = 100
Score = 33.5 bits (73), Expect = 0.86
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = +1
Query: 124 LDKDSGLWGNMLTSSNQYLRPDY------LSPLPTTLDAKKSPLALLAQTCSAIGADAPN 285
LD DSG G +YL+ ++ D + SPLALLA TCS IG +P
Sbjct: 4 LDVDSGGGGGGGGGHGEYLQQQQQHGNGAVAAAAAAQDTQPSPLALLAATCSKIGPPSPG 63
Query: 286 PKLISAAEKA 315
AA A
Sbjct: 64 DDEEEAAAAA 73
>AF494280-1|AAM12875.1| 135|Homo sapiens GC-binding transcription
factor Sp3 protein.
Length = 135
Score = 33.5 bits (73), Expect = 0.86
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = +1
Query: 124 LDKDSGLWGNMLTSSNQYLRPDY------LSPLPTTLDAKKSPLALLAQTCSAIGADAPN 285
LD DSG G +YL+ ++ D + SPLALLA TCS IG +P
Sbjct: 16 LDVDSGGGGGGGGGHGEYLQQQQQHGNGAVAAAAAAQDTQPSPLALLAATCSKIGPPSPG 75
Query: 286 PKLISAAEKA 315
AA A
Sbjct: 76 DDEEEAAAAA 85
>AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 33.5 bits (73), Expect = 0.86
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 539 PPANRKTPSEKSDE--RSSPLQMSPTPAKSNADAIITSSASKLSYTPTSL-SSHTETKET 709
PPA+ TP ++ +E ++ P Q +PTP + A +++ S S + S +S E +
Sbjct: 535 PPASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLP 594
Query: 710 SSFKPSIPVDV 742
S P P +V
Sbjct: 595 SKEGPEPPEEV 605
>AB210034-1|BAE06116.1| 1537|Homo sapiens C6orf21 variant protein
protein.
Length = 1537
Score = 33.5 bits (73), Expect = 0.86
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 539 PPANRKTPSEKSDE--RSSPLQMSPTPAKSNADAIITSSASKLSYTPTSL-SSHTETKET 709
PPA+ TP ++ +E ++ P Q +PTP + A +++ S S + S +S E +
Sbjct: 539 PPASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLP 598
Query: 710 SSFKPSIPVDV 742
S P P +V
Sbjct: 599 SKEGPEPPEEV 609
>BC111692-1|AAI11693.1| 620|Homo sapiens SR140 protein protein.
Length = 620
Score = 33.1 bits (72), Expect = 1.1
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +2
Query: 557 TPSEKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSSFKPSIPV 736
TP+ K ER SP+P++S++ + S + K + S SH E+ + S P
Sbjct: 510 TPTRK--ERKRRHSTSPSPSRSSSGRRVKSPSPKSERSERSERSHKESSRSRSSHKDSPR 567
Query: 737 DVVRFSRRPAS 769
DV + ++R S
Sbjct: 568 DVSKKAKRSPS 578
>BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for
IMAGE:2820942) protein.
Length = 1027
Score = 33.1 bits (72), Expect = 1.1
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +2
Query: 557 TPSEKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSSFKPSIPV 736
TP+ K ER SP+P++S++ + S + K + S SH E+ + S P
Sbjct: 917 TPTRK--ERKRRHSTSPSPSRSSSGRRVKSPSPKSERSERSERSHKESSRSRSSHKDSPR 974
Query: 737 DVVRFSRRPAS 769
DV + ++R S
Sbjct: 975 DVSKKAKRSPS 985
>AB002330-1|BAA20790.1| 1028|Homo sapiens KIAA0332 protein.
Length = 1028
Score = 33.1 bits (72), Expect = 1.1
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +2
Query: 557 TPSEKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSSFKPSIPV 736
TP+ K ER SP+P++S++ + S + K + S SH E+ + S P
Sbjct: 918 TPTRK--ERKRRHSTSPSPSRSSSGRRVKSPSPKSERSERSERSHKESSRSRSSHKDSPR 975
Query: 737 DVVRFSRRPAS 769
DV + ++R S
Sbjct: 976 DVSKKAKRSPS 986
>M33518-1|AAA35586.1| 2142|Homo sapiens protein ( Human
HLA-B-associated transcript 2 (BAT2) gene, 3' end. ).
Length = 2142
Score = 32.7 bits (71), Expect = 1.5
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +2
Query: 539 PPANRKTPSEKSDE--RSSPLQMSPTPAKSNADAIITSSASKLSYTPTSL-SSHTETKET 709
PPA+ TP + +E ++ P Q +PTP + A +++ S S + S +S E +
Sbjct: 523 PPASAPTPETEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLP 582
Query: 710 SSFKPSIPVDV 742
S P P +V
Sbjct: 583 SKEGPEPPEEV 593
>M33509-1|AAA35585.1| 2142|Homo sapiens protein ( Human
HLA-B-associated transcript 2 (BAT2) mRNA, complete cds.
).
Length = 2142
Score = 32.7 bits (71), Expect = 1.5
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +2
Query: 539 PPANRKTPSEKSDE--RSSPLQMSPTPAKSNADAIITSSASKLSYTPTSL-SSHTETKET 709
PPA+ TP + +E ++ P Q +PTP + A +++ S S + S +S E +
Sbjct: 523 PPASAPTPETEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLP 582
Query: 710 SSFKPSIPVDV 742
S P P +V
Sbjct: 583 SKEGPEPPEEV 593
>AL662801-47|CAI18313.1| 2157|Homo sapiens HLA-B associated
transcript 2 protein.
Length = 2157
Score = 32.7 bits (71), Expect = 1.5
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +2
Query: 539 PPANRKTPSEKSDE--RSSPLQMSPTPAKSNADAIITSSASKLSYTPTSL-SSHTETKET 709
PPA+ TP + +E ++ P Q +PTP + A +++ S S + S +S E +
Sbjct: 535 PPASAPTPETEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLP 594
Query: 710 SSFKPSIPVDV 742
S P P +V
Sbjct: 595 SKEGPEPPEEV 605
>X68561-1|CAA48563.1| 784|Homo sapiens SPR-1 protein.
Length = 784
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +1
Query: 154 MLTSSNQYLRPDYLSPLPTTL---DAKKSPLALLAQTCSAIGADAPN 285
M T + P+ + P T D++ SPLALLA TCS IG N
Sbjct: 18 MATEGGKTSEPENNNKKPKTSGSQDSQPSPLALLAATCSKIGTPGEN 64
>BC109300-1|AAI09301.1| 784|Homo sapiens Sp4 transcription factor
protein.
Length = 784
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +1
Query: 154 MLTSSNQYLRPDYLSPLPTTL---DAKKSPLALLAQTCSAIGADAPN 285
M T + P+ + P T D++ SPLALLA TCS IG N
Sbjct: 18 MATEGGKTSEPENNNKKPKTSGSQDSQPSPLALLAATCSKIGTPGEN 64
>BC038669-1|AAH38669.1| 466|Homo sapiens SP8 protein protein.
Length = 466
Score = 32.3 bits (70), Expect = 2.0
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 229 SPLALLAQTCSAIGADAPNPKLISAAEKASKK 324
+PLA+LA TC+ IG+ +P+P +S + + K
Sbjct: 15 TPLAMLAATCNKIGSPSPSPSSLSDSSSSFGK 46
>AY441957-1|AAR30505.1| 781|Homo sapiens transcription factor SP3
large isoform protein.
Length = 781
Score = 32.3 bits (70), Expect = 2.0
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = +1
Query: 124 LDKDSGLWGNMLTSSNQYLRPDY------LSPLPTTLDAKKSPLALLAQTCSAIGADAPN 285
LD DSG G +YL+ ++ D + SPLALLA TCS +G +P
Sbjct: 16 LDVDSGGGGGGGGGHGEYLQQQQQHGNGAVAAAAAAQDTQPSPLALLAATCSKMGPPSPG 75
Query: 286 PKLISAAEKA 315
AA A
Sbjct: 76 DDEEEAAAAA 85
>AY167047-1|AAO38028.1| 508|Homo sapiens specificity protein 8 long
isoform protein.
Length = 508
Score = 32.3 bits (70), Expect = 2.0
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 229 SPLALLAQTCSAIGADAPNPKLISAAEKASKK 324
+PLA+LA TC+ IG+ +P+P +S + + K
Sbjct: 15 TPLAMLAATCNKIGSPSPSPSSLSDSSSSFGK 46
>AK056857-1|BAB71297.1| 452|Homo sapiens protein ( Homo sapiens
cDNA FLJ32295 fis, clone PROST2001823, weakly similar to
TRANSCRIPTION FACTOR SP1. ).
Length = 452
Score = 32.3 bits (70), Expect = 2.0
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 229 SPLALLAQTCSAIGADAPNPKLISAAEKASKK 324
+PLA+LA TC+ IG+ +P+P +S + + K
Sbjct: 15 TPLAMLAATCNKIGSPSPSPSSLSDSSSSFGK 46
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 32.3 bits (70), Expect = 2.0
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Frame = +2
Query: 473 LQTPPVQARCGXXXXXXXXXXXPPAN-RKTPSEKSDERSSPLQMSP---TPAKSNADAII 640
L T PV ++ P A P+ ERS+PL P TP S+ + +
Sbjct: 1180 LSTTPVDSKTQVATSTEASSPPPTAEVTSMPTSTPGERSTPLTSMPVRHTPVASSEASTL 1239
Query: 641 TSSASKLSYTPTSLSSHTETKETSSFKPSIP 733
++S S TP + S+ T + T++ S+P
Sbjct: 1240 STSPVDTS-TPVTTSAETSSSPTTAEGTSLP 1269
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 32.3 bits (70), Expect = 2.0
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Frame = +2
Query: 473 LQTPPVQARCGXXXXXXXXXXXPPAN-RKTPSEKSDERSSPLQMSP---TPAKSNADAII 640
L T PV ++ P A P+ ERS+PL P TP S+ + +
Sbjct: 1180 LSTTPVDSKTQVATSTEASSPPPTAEVTSMPTSTPGERSTPLTSMPVRHTPVASSEASTL 1239
Query: 641 TSSASKLSYTPTSLSSHTETKETSSFKPSIP 733
++S S TP + S+ T + T++ S+P
Sbjct: 1240 STSPVDTS-TPVTTSAETSSSPTTAEGTSLP 1269
>BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein.
Length = 257
Score = 31.9 bits (69), Expect = 2.6
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 563 SEKSDERSSPLQMSPTPAKSNADAIITSSA-SKLSYTPTSLSSHTETKETSSFKPSIP 733
S S SSP + +P+ S++ +SS+ S S +P+S SS T + TSS S P
Sbjct: 170 SSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPSTSSPSSSSP 227
Score = 30.3 bits (65), Expect = 8.0
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +2
Query: 545 ANRKTPSEKSDERSSPLQMSPTPAKSNADAIITSSA---SKLSYTPTSLSSHTETKETSS 715
++ + S S SSP +P+ SN+ +SS+ S S +P S S + + TSS
Sbjct: 157 SSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSS 216
Query: 716 FKPSIPVDVVRFSRRPAS 769
S P S P+S
Sbjct: 217 PSTSSPSSSSPSSSSPSS 234
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 31.9 bits (69), Expect = 2.6
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 563 SEKSDERSSPLQMSPTPAKSNADAIITSSA-SKLSYTPTSLSSHTETKETSSFKPSIP 733
S S SSP + +P+ S++ +SS+ S S +P+S SS T + TSS S P
Sbjct: 171 SSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPSTSSPSSSSP 228
Score = 30.3 bits (65), Expect = 8.0
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 545 ANRKTPSEKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSS 715
++ +PS S SS S + S++ + +SS+S S +P+S SS + +SS
Sbjct: 87 SSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSS 143
Score = 30.3 bits (65), Expect = 8.0
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +2
Query: 545 ANRKTPSEKSDERSSPLQMSPTPAKSNADAIITSSA---SKLSYTPTSLSSHTETKETSS 715
++ + S S SSP +P+ SN+ +SS+ S S +P S S + + TSS
Sbjct: 158 SSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSS 217
Query: 716 FKPSIPVDVVRFSRRPAS 769
S P S P+S
Sbjct: 218 PSTSSPSSSSPSSSSPSS 235
>M74088-1|AAA03586.1| 2843|Homo sapiens APC protein.
Length = 2843
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/57 (26%), Positives = 34/57 (59%)
Frame = +2
Query: 545 ANRKTPSEKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSS 715
+ +PS R +P +P+P KS+AD S++++ S PT ++++T+ +++ +
Sbjct: 2768 SKHSSPSGTVAARVTPFNYNPSPRKSSAD----STSARPSQIPTPVNNNTKKRDSKT 2820
>M73548-2|AAA60354.1| 2743|Homo sapiens polyposis locus-encoded
protein protein.
Length = 2743
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/57 (26%), Positives = 34/57 (59%)
Frame = +2
Query: 545 ANRKTPSEKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSS 715
+ +PS R +P +P+P KS+AD S++++ S PT ++++T+ +++ +
Sbjct: 2668 SKHSSPSGTVAARVTPFNYNPSPRKSSAD----STSARPSQIPTPVNNNTKKRDSKT 2720
>M73548-1|AAA60353.1| 2844|Homo sapiens polyposis locus-encoded
protein protein.
Length = 2844
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/57 (26%), Positives = 34/57 (59%)
Frame = +2
Query: 545 ANRKTPSEKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSS 715
+ +PS R +P +P+P KS+AD S++++ S PT ++++T+ +++ +
Sbjct: 2769 SKHSSPSGTVAARVTPFNYNPSPRKSSAD----STSARPSQIPTPVNNNTKKRDSKT 2821
>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
protein.
Length = 1217
Score = 31.1 bits (67), Expect = 4.6
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 584 SSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSSFKPSIPVDV 742
+S ++PTP ++ + + S + TP+S+ + T T+ F PSIP D+
Sbjct: 359 TSETAVTPTPVTPSSLSTDIPTTSLRTLTPSSVGTSTSLTTTTDF-PSIPTDI 410
>AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein.
Length = 957
Score = 31.1 bits (67), Expect = 4.6
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 584 SSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSSFKPSIPVDV 742
+S ++PTP ++ + + S + TP+S+ + T T+ F PSIP D+
Sbjct: 359 TSETAVTPTPVTPSSLSTDIPTTSLRTLTPSSVGTSTSLTTTTDF-PSIPTDI 410
>AB210001-1|BAE06083.1| 2845|Homo sapiens APC variant protein protein.
Length = 2845
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/57 (26%), Positives = 34/57 (59%)
Frame = +2
Query: 545 ANRKTPSEKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSS 715
+ +PS R +P +P+P KS+AD S++++ S PT ++++T+ +++ +
Sbjct: 2770 SKHSSPSGTVAARVTPFNYNPSPRKSSAD----STSARPSQIPTPVNNNTKKRDSKT 2822
>AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein.
Length = 877
Score = 31.1 bits (67), Expect = 4.6
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 584 SSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSSFKPSIPVDV 742
+S ++PTP ++ + + S + TP+S+ + T T+ F PSIP D+
Sbjct: 19 TSETAVTPTPVTPSSLSTDIPTTSLRTLTPSSVGTSTSLTTTTDF-PSIPTDI 70
>AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 31.1 bits (67), Expect = 4.6
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 584 SSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSSFKPSIPVDV 742
+S ++PTP ++ + + S + TP+S+ + T T+ F PSIP D+
Sbjct: 19 TSETAVTPTPVTPSSLSTDIPTTSLRTLTPSSVGTSTSLTTTTDF-PSIPTDI 70
>L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated protein
1B protein.
Length = 2468
Score = 30.3 bits (65), Expect = 8.0
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 557 TPSEKSDERSSPLQMSPTPA--KSNADAIITSSASKLSYTPTSLSSHTETKETSS 715
+P +KSD +S PL SP PA K ++D + ++ K + + T T E +
Sbjct: 2256 SPVKKSDGKSKPLAASPKPAGLKESSDKVSRVASPKKKESVEKAAKPTTTPEVKA 2310
>BC131737-1|AAI31738.1| 144|Homo sapiens LOC653316 protein protein.
Length = 144
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 593 LQMSP-TPAKSNADAIITSSASKLSYTPTSLSSHTETKET 709
+Q+ P TPAK D+ IT S ++S +P+S + T++T
Sbjct: 69 MQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEATEKT 108
>BC101341-1|AAI01342.1| 114|Homo sapiens hypothetical protein
LOC653316 protein.
Length = 114
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 593 LQMSP-TPAKSNADAIITSSASKLSYTPTSLSSHTETKET 709
+Q+ P TPAK D+ IT S ++S +P+S + T++T
Sbjct: 69 MQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEATEKT 108
>BC101340-1|AAI01341.1| 144|Homo sapiens LOC653316 protein protein.
Length = 144
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 593 LQMSP-TPAKSNADAIITSSASKLSYTPTSLSSHTETKET 709
+Q+ P TPAK D+ IT S ++S +P+S + T++T
Sbjct: 69 MQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEATEKT 108
>BC101339-1|AAI01340.1| 144|Homo sapiens LOC653316 protein protein.
Length = 144
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 593 LQMSP-TPAKSNADAIITSSASKLSYTPTSLSSHTETKET 709
+Q+ P TPAK D+ IT S ++S +P+S + T++T
Sbjct: 69 MQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEATEKT 108
>BC101338-1|AAI01339.1| 114|Homo sapiens hypothetical protein
LOC653316 protein.
Length = 114
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 593 LQMSP-TPAKSNADAIITSSASKLSYTPTSLSSHTETKET 709
+Q+ P TPAK D+ IT S ++S +P+S + T++T
Sbjct: 69 MQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEATEKT 108
>BC032579-1|AAH32579.1| 297|Homo sapiens orthodenticle homeobox 2
protein.
Length = 297
Score = 30.3 bits (65), Expect = 8.0
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +2
Query: 542 PANRKT-PS-EKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSS 715
PA +KT P+ E S E + Q +P P+ ++ I +SSA ++P S+S ++ TSS
Sbjct: 118 PAKKKTSPAREVSSESGTSGQFTP-PSSTSVPTIASSSAPVSIWSPASISPLSDPLSTSS 176
>AF298117-1|AAG16243.1| 297|Homo sapiens homeobox protein OTX2
protein.
Length = 297
Score = 30.3 bits (65), Expect = 8.0
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +2
Query: 542 PANRKT-PS-EKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSS 715
PA +KT P+ E S E + Q +P P+ ++ I +SSA ++P S+S ++ TSS
Sbjct: 118 PAKKKTSPAREVSSESGTSGQFTP-PSSTSVPTIASSSAPVSIWSPASISPLSDPLSTSS 176
>AF093138-1|AAD31385.1| 289|Homo sapiens homeodomain protein OTX2
protein.
Length = 289
Score = 30.3 bits (65), Expect = 8.0
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +2
Query: 542 PANRKT-PS-EKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSS 715
PA +KT P+ E S E + Q +P P+ ++ I +SSA ++P S+S ++ TSS
Sbjct: 110 PAKKKTSPAREVSSESGTSGQFTP-PSSTSVPTIASSSAPVSIWSPASISPLSDPLSTSS 168
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,511,291
Number of Sequences: 237096
Number of extensions: 2682930
Number of successful extensions: 7963
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 7279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7926
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -