Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0207
(773 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 24 1.8
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 24 1.8
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 24 1.8
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 24 1.8
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 23 3.2
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 3.2
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 7.3
AF213011-1|AAG43567.1| 62|Apis mellifera esterase A2 protein. 22 7.3
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 9.6
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 9.6
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 9.6
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 9.6
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.8 bits (49), Expect = 1.8
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +3
Query: 468 KLFKHLRCKLGAVVIRALHLKGLHHPQIAKRRRKSQT 578
+L KHL L + + L LHHP R+ T
Sbjct: 378 ELPKHLPTSLTKSKMEVMELSDLHHPNCKINRKVHHT 414
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -2
Query: 505 TAPSLHRRCLKSFPSTKEVIWREYLQKLCLPGF 407
TAP+ R ++ + ++WRE + GF
Sbjct: 382 TAPNAEERRVQGVTKPRYMVWRETISSTATLGF 414
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -2
Query: 505 TAPSLHRRCLKSFPSTKEVIWREYLQKLCLPGF 407
TAP+ R ++ + ++WRE + GF
Sbjct: 297 TAPNAEERRVQGVTKPRYMVWRETISSTATLGF 329
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -2
Query: 505 TAPSLHRRCLKSFPSTKEVIWREYLQKLCLPGF 407
TAP+ R ++ + ++WRE + GF
Sbjct: 616 TAPNAEERRVQGVTKPRYMVWRETISSTATLGF 648
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 23.0 bits (47), Expect = 3.2
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +1
Query: 289 KLISAAEKASKKYDDKPIHTDNKPSFKPYESCLTSREKTRTP 414
KL+ E+ ++ + ++N P F Y + LT R P
Sbjct: 238 KLVEGLEEEAEGAITVELQSENIPGFDDYMASLTPDTNRRNP 279
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 23.0 bits (47), Expect = 3.2
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +1
Query: 289 KLISAAEKASKKYDDKPIHTDNKPSFKPYESCLTSREKTRTP 414
KL+ E+ ++ + ++N P F Y + LT R P
Sbjct: 328 KLVEGLEEEAEGAITVELQSENIPGFDDYMASLTPDTNRRNP 369
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 7.3
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 542 PANRKTPSEKSDE-RSSPLQMSPTPAKSNADAI-ITSSASKLSYTPTSLSSHTET 700
P+ R TP++K + SPL P P +N+++I S S S+T T + H+ T
Sbjct: 193 PSIRITPAKKRIKLEQSPL-CPPAPRLTNSNSIKHESDNSDYSHT-TDENRHSST 245
>AF213011-1|AAG43567.1| 62|Apis mellifera esterase A2 protein.
Length = 62
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 160 TSSNQYLRPDYLSP 201
TSS +RPDYL P
Sbjct: 33 TSSFHEMRPDYLLP 46
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = +1
Query: 307 EKASKKYDDKPIHTDNKPSFKPYESCLTSREKTRTPEDRASVN 435
E+ K Y ++ + + ++K T RE++R P+ +S++
Sbjct: 44 EREQKSYKNENSYRKYRETWKERSRDRTERERSREPKIISSLS 86
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = +1
Query: 307 EKASKKYDDKPIHTDNKPSFKPYESCLTSREKTRTPEDRASVN 435
E+ K Y ++ + + ++K T RE++R P+ +S++
Sbjct: 44 EREQKSYKNENSYRKYRETWKERSRDRTERERSREPKIISSLS 86
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = +1
Query: 307 EKASKKYDDKPIHTDNKPSFKPYESCLTSREKTRTPEDRASVN 435
E+ K Y ++ + + ++K T RE++R P+ +S++
Sbjct: 44 EREQKSYKNENSYRKYRETWKERSRDRTERERSREPKIISSLS 86
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = +1
Query: 307 EKASKKYDDKPIHTDNKPSFKPYESCLTSREKTRTPEDRASVN 435
E+ K Y ++ + + ++K T RE++R P+ +S++
Sbjct: 44 EREQKSYKNENSYRKYRETWKERSRDRTERERSREPKIISSLS 86
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,206
Number of Sequences: 438
Number of extensions: 5560
Number of successful extensions: 24
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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