Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0206
(690 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 24 1.3
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 24 1.3
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 22 4.1
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 7.2
AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory recept... 21 7.2
S78567-1|AAB34900.1| 141|Tribolium castaneum GABA receptor subu... 21 9.5
EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive pep... 21 9.5
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 21 9.5
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 9.5
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 9.5
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 21 9.5
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 9.5
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 110 HTESSLRSPFTEPKTSNMAGARRVGRGREY 21
HT + P+ T G R+ RGR+Y
Sbjct: 321 HTTVNEAQPYVRNTTVPTQGVARMSRGRQY 350
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 110 HTESSLRSPFTEPKTSNMAGARRVGRGREY 21
HT + P+ T G R+ RGR+Y
Sbjct: 269 HTTVNEAQPYVRNTTVPTQGVARMSRGRQY 298
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 14 HVRTHDRDRRAARPPC 61
H+RTH ++R A P C
Sbjct: 365 HLRTHTGEKRFACPIC 380
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 21.4 bits (43), Expect = 7.2
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 288 RDGESRVYPAVRVHNGERDFINDAV 214
RDG R V N R+FI A+
Sbjct: 258 RDGSHRFSTMVSSANRRREFIRSAI 282
>AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory receptor
candidate 22 protein.
Length = 301
Score = 21.4 bits (43), Expect = 7.2
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +2
Query: 584 YAFRFFICEXLNFINVXGQI 643
+AF+ +C +NF+ + G +
Sbjct: 154 FAFQVLMCTSMNFVLLIGDL 173
>S78567-1|AAB34900.1| 141|Tribolium castaneum GABA receptor subunit
protein.
Length = 141
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +1
Query: 643 ILSWTSFW 666
I+SW SFW
Sbjct: 83 IISWVSFW 90
>EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive
peptide receptor 1 protein.
Length = 374
Score = 21.0 bits (42), Expect = 9.5
Identities = 5/24 (20%), Positives = 13/24 (54%)
Frame = +1
Query: 364 VKYHKYYQWVCFVLFFQAILFYVP 435
+++H ++W ++ LF +P
Sbjct: 174 IEFHPQWKWQVYMTLVSLSLFIIP 197
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 11 AHVRTHDRDRRAARPPC 61
AHVRTH ++ P C
Sbjct: 39 AHVRTHSGEKPFRCPVC 55
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 148 WLCNVSGTHCC 116
WL N+S T+ C
Sbjct: 135 WLINISATYIC 145
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 148 WLCNVSGTHCC 116
WL N+S T+ C
Sbjct: 368 WLINISATYIC 378
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 11 AHVRTHDRDRRAARPPC 61
AHVRTH ++ P C
Sbjct: 295 AHVRTHSGEKPFRCPVC 311
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 148 WLCNVSGTHCC 116
WL N+S T+ C
Sbjct: 368 WLINISATYIC 378
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,044
Number of Sequences: 336
Number of extensions: 3855
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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