Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0205
(737 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9AHX4 Cluster: ATP synthase subunit b; n=2; Candidatus... 37 0.45
UniRef50_O28565 Cluster: Type I restriction-modification enzyme,... 35 2.4
UniRef50_Q30R81 Cluster: Alpha/beta hydrolase fold; n=1; Thiomic... 34 3.2
UniRef50_Q64AA2 Cluster: ATP-binding protein; n=1; uncultured ar... 34 3.2
UniRef50_Q8I1U6 Cluster: Putative uncharacterized protein PFD069... 34 4.2
UniRef50_Q8IIL8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_A0CKF1 Cluster: Chromosome undetermined scaffold_2, who... 33 5.5
UniRef50_UPI0000DB76E7 Cluster: PREDICTED: similar to activating... 33 7.3
UniRef50_Q8A143 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_Q6IG42 Cluster: HDC07260; n=1; Drosophila melanogaster|... 33 7.3
UniRef50_UPI00015538F4 Cluster: PREDICTED: similar to PRAMEl7; n... 33 9.7
UniRef50_Q6LQS6 Cluster: Putative uncharacterized protein BLL486... 33 9.7
UniRef50_A0RL66 Cluster: Polysaccharide biosynthesis protein; n=... 33 9.7
>UniRef50_Q9AHX4 Cluster: ATP synthase subunit b; n=2; Candidatus
Carsonella ruddii|Rep: ATP synthase subunit b -
Carsonella ruddii
Length = 151
Score = 37.1 bits (82), Expect = 0.45
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +1
Query: 301 SFEILYGFPLNQILYINIFDKKD-IFNVCIKILHEKITVDSLKKYPSLV-EVYSSLVEKV 474
SF+I++ L +I I D K+ +FN KI+ +K+ +D + K +L + + SL+EK+
Sbjct: 21 SFKIIFPVILKKINNFLIIDYKNFVFNNQEKIIKKKL-LDEIAKNENLTNKKFISLIEKI 79
Query: 475 KVSISIQKSLYCICFIEYANEDINV 549
K SI ++K + I FI+ E INV
Sbjct: 80 KKSILLEKQNF-INFIKL--EKINV 101
>UniRef50_O28565 Cluster: Type I restriction-modification enzyme, R
subunit; n=1; Archaeoglobus fulgidus|Rep: Type I
restriction-modification enzyme, R subunit -
Archaeoglobus fulgidus
Length = 957
Score = 34.7 bits (76), Expect = 2.4
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +1
Query: 226 LYEEIKSTGNWNTEECKEYIKPLDKSFEILYGFPLNQI-LYINIFDKKDIF-NVCIKILH 399
LY EI++ E+ E+ + D E+ + + + L I K+D F +K +H
Sbjct: 711 LYSEIRNLYRLLLEDRIEFKEKFDLLSEVYHVYLQRENQLEAEIEQKRDQFYREALKFIH 770
Query: 400 EKITVDSLKKYPSLVEVYSSLVEKVK 477
E I V +KK ++E+ +E+VK
Sbjct: 771 ETIDVQRIKKDYPIIEINDEFLERVK 796
>UniRef50_Q30R81 Cluster: Alpha/beta hydrolase fold; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: Alpha/beta
hydrolase fold - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 262
Score = 34.3 bits (75), Expect = 3.2
Identities = 19/79 (24%), Positives = 32/79 (40%)
Frame = +1
Query: 274 KEYIKPLDKSFEILYGFPLNQILYINIFDKKDIFNVCIKILHEKITVDSLKKYPSLVEVY 453
K Y K ++ ++GFP LY N+ D+ CI L +E Y
Sbjct: 11 KTYGKATNQPVVFIHGFPFEHTLYNNVIDEFKNVYYCISYDIRGFGNSKLNSAQCTIESY 70
Query: 454 SSLVEKVKVSISIQKSLYC 510
+ +E V + + + K + C
Sbjct: 71 TEDLESVILRLKLDKPIIC 89
>UniRef50_Q64AA2 Cluster: ATP-binding protein; n=1; uncultured
archaeon GZfos32E7|Rep: ATP-binding protein - uncultured
archaeon GZfos32E7
Length = 357
Score = 34.3 bits (75), Expect = 3.2
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 265 EECKEYIKPLDKSFEILYGFPLNQILYINIFDKKDIFNVCIKILHEKITVDSLKKY-PSL 441
E KEY K + K +I+ G P+ L+ IF++K+ + + E V+ KKY P L
Sbjct: 85 ENVKEYAKAILKDLKIIGGIPIPITLFEKIFERKERSKDVFRYI-ESFMVEISKKYIPVL 143
Query: 442 VEVYSSLVEKVKV 480
+ ++ VK+
Sbjct: 144 ILDELQVIGDVKI 156
>UniRef50_Q8I1U6 Cluster: Putative uncharacterized protein PFD0690c;
n=6; Plasmodium|Rep: Putative uncharacterized protein
PFD0690c - Plasmodium falciparum (isolate 3D7)
Length = 1485
Score = 33.9 bits (74), Expect = 4.2
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Frame = +1
Query: 199 STILSNI-----IILYEEIKSTGNWNTEECKEYIKPLDKSFEILYGFPLNQILYINIFDK 363
STI N+ II++ E K+ NTE K +PL + EI ++ + + +
Sbjct: 1240 STIYDNVLSVLSIIIFNENKNFKENNTESLKHIQQPLQTNNEI----NIHNFITMFVSMN 1295
Query: 364 KDIFNVCIKILHEKITVDSLKKYPSLVE--VYSSLVEKVKVSISIQKSLYCICFIEYANE 537
K+ F +L++K+ D L+KY S ++ +Y L +K SI L C I + E
Sbjct: 1296 KNYFK---DLLNQKVVQDILRKYGSFIQMCIYFDLKKKKVDSIINLLELSRKCNIPISTE 1352
Query: 538 DI 543
+
Sbjct: 1353 TL 1354
>UniRef50_Q8IIL8 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 637
Score = 33.5 bits (73), Expect = 5.5
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 256 WNTEECKEYIKPLDKSFEILYGFPLNQILYINIFDKKDI 372
W EC Y K K +LYGF N Y +I DK ++
Sbjct: 13 WLNYECLNYSKKYLKDVRLLYGFKGNHTCYFSITDKSNM 51
>UniRef50_A0CKF1 Cluster: Chromosome undetermined scaffold_2, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_2,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 638
Score = 33.5 bits (73), Expect = 5.5
Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +1
Query: 364 KDIFNVCIKILHEKITVDSLKKYPSLVEVYSSLVEKVKVSISIQKSLYCI---CFIEYAN 534
++I++ C H + + +K+P+L+++ +LV+ V + ++LY I C YA
Sbjct: 360 QEIYDACAATFHYVVEIYGQEKWPNLLKLLQNLVKNKGVRKMLAENLYVIAKSCGPRYAE 419
Query: 535 EDI 543
+D+
Sbjct: 420 KDL 422
>UniRef50_UPI0000DB76E7 Cluster: PREDICTED: similar to activating
transcription factor 2 isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to activating
transcription factor 2 isoform 1 - Apis mellifera
Length = 2652
Score = 33.1 bits (72), Expect = 7.3
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +1
Query: 226 LYEEIKSTGNWNTEECKEYIKPLDKSFEILYGFPLNQILYINIFDKKD 369
LYEE+K +WN EE K KP K + ++ + N L N+ D+KD
Sbjct: 1582 LYEELKKIYDWNEEESKS--KPRIKGDQRMF-YGTNDKLDPNVIDQKD 1626
>UniRef50_Q8A143 Cluster: Putative uncharacterized protein; n=1;
Bacteroides thetaiotaomicron|Rep: Putative
uncharacterized protein - Bacteroides thetaiotaomicron
Length = 94
Score = 33.1 bits (72), Expect = 7.3
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Frame = +1
Query: 193 VSSTILSNIIILYEEIKSTGNWNTEECKEYIK-----PLDKSFEILYGFPLNQILYINIF 357
+ S +L+N + L + S + T++ KEY PL++S + Y ILY I
Sbjct: 2 LQSFVLANRLCLIQHEASIPGYRTQK-KEYQMAHEHPPLNQSIYLPYWH--FSILYTYIL 58
Query: 358 DKKDIFNVCIKILHEKITVDSL 423
+K FN CI ++ KITV SL
Sbjct: 59 QEKSHFNACIPCIY-KITVKSL 79
>UniRef50_Q6IG42 Cluster: HDC07260; n=1; Drosophila
melanogaster|Rep: HDC07260 - Drosophila melanogaster
(Fruit fly)
Length = 171
Score = 33.1 bits (72), Expect = 7.3
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 430 YPSLVEVYSSLVEKVKVSISIQKSLYCICFIEYANEDINVN 552
YP LV+ Y+S E V S S+ YC C Y+NE+ N N
Sbjct: 130 YP-LVKYYTSTAEAVSASASVSCYCYCYCSSFYSNEN-NAN 168
>UniRef50_UPI00015538F4 Cluster: PREDICTED: similar to PRAMEl7; n=2;
Mus musculus|Rep: PREDICTED: similar to PRAMEl7 - Mus
musculus
Length = 428
Score = 32.7 bits (71), Expect = 9.7
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 334 QILYINIFDKKDIFNVCIKILHEKITVDSL--KKYPSLVEVYSSLVEKVKVSISIQ 495
Q+ IN++D NV LH ++ L +KYP+L EVY+ L + V+V I Q
Sbjct: 138 QLTSINLYDNDISKNVLENFLHHTTSLSQLTTEKYPALSEVYNKL-KYVEVEIFSQ 192
>UniRef50_Q6LQS6 Cluster: Putative uncharacterized protein BLL4869;
n=2; Vibrionales|Rep: Putative uncharacterized protein
BLL4869 - Photobacterium profundum (Photobacterium sp.
(strain SS9))
Length = 293
Score = 32.7 bits (71), Expect = 9.7
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 277 EYIKPLDKSFEILYGFPLNQILYI-NIFDKKDIFNVCIKILHEKITVD-SLKKYPSLVEV 450
EYI P+D E+L L+++ I NI D + NV I K VD L P++ E+
Sbjct: 233 EYITPIDGDGEVLL---LDELALISNISDFEKAINVIISCNEIKFPVDWHLSNCPTIEEL 289
Query: 451 YSSL 462
YS+L
Sbjct: 290 YSAL 293
>UniRef50_A0RL66 Cluster: Polysaccharide biosynthesis protein; n=1;
Bacillus thuringiensis str. Al Hakam|Rep: Polysaccharide
biosynthesis protein - Bacillus thuringiensis (strain Al
Hakam)
Length = 485
Score = 32.7 bits (71), Expect = 9.7
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = -1
Query: 419 LSTVIFSCRILMHTLKISFLSKIFIYKI*FNGKPYKISKDLSKGFMYSL 273
L VIF I++ + ISF+SKI + I + G Y +K+ +G +Y +
Sbjct: 424 LVIVIFDYLIVIPNVYISFISKILLGMISYGGSIYIFNKNEIEGLLYKI 472
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,364,783
Number of Sequences: 1657284
Number of extensions: 10912809
Number of successful extensions: 28278
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 27064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28270
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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