Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0205
         (737 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.84 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.9  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    23   1.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.5  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    22   4.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   7.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 601  CTRININIIFLKYEYFNLHLYLHWHTQ*N 515
            CTR  ++ ++ KYE FN    LHW    N
Sbjct: 1291 CTRY-LHCLWGKYEVFNCAPGLHWDNNKN 1318


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -1

Query: 431 YFFRLSTVIFSCRILMHTLKISFLSKIFIY 342
           Y+F    ++F C  ++ T+ + FL  I+ +
Sbjct: 259 YYFYYMHLLFCCAFIIFTMHLLFLLCIYYF 288


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 689 HLNVAEQHRNPSVY 648
           HL++ + H NP VY
Sbjct: 87  HLHIYDMHHNPQVY 100


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 424 KKYPSLVEVYSSLVEKVKV 480
           K YPSL + Y+ L+  VK+
Sbjct: 38  KYYPSLAKCYACLLMVVKI 56


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 689 HLNVAEQHRNPSVY 648
           HL++ + H NP +Y
Sbjct: 105 HLHIYDLHHNPDIY 118


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 287  FMYSLHSSVFQLPVLFISSYNIMILLNIVELTGHSL 180
            F Y++   +F + V F    NI +++  +  TG++L
Sbjct: 947  FYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYAL 982


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 287  FMYSLHSSVFQLPVLFISSYNIMILLNIVELTGHSL 180
            F Y++   +F + V F    NI +++  +  TG++L
Sbjct: 947  FYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYAL 982


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 287  FMYSLHSSVFQLPVLFISSYNIMILLNIVELTGHSL 180
            F Y++   +F + V F    NI +++  +  TG++L
Sbjct: 947  FYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYAL 982


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 287  FMYSLHSSVFQLPVLFISSYNIMILLNIVELTGHSL 180
            F Y++   +F + V F    NI +++  +  TG++L
Sbjct: 947  FYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYAL 982


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -3

Query: 417 VYSYFFM*NFNAYIENIFLIKNIYIQDL 334
           +Y +FF  +   Y+  ++L+KN+ +  L
Sbjct: 274 MYVFFFHLSDVRYVMVVYLLKNVVLYGL 301


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,914
Number of Sequences: 336
Number of extensions: 3169
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)