Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0205
         (737 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016049-1|AAV36934.1| 1105|Drosophila melanogaster LP18465p pro...    29   5.0  
AE014298-2595|AAF48750.2| 1105|Drosophila melanogaster CG8211-PA...    29   5.0  
AY084109-1|AAL89847.1|  281|Drosophila melanogaster AT09390p pro...    29   8.7  
AE014134-2327|AAF53282.2|  281|Drosophila melanogaster CG16825-P...    29   8.7  

>BT016049-1|AAV36934.1| 1105|Drosophila melanogaster LP18465p protein.
          Length = 1105

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = +1

Query: 376  NVCIKILHEKITVDSLKKYPSLVEVYSSLVEKVKVSISIQKSLYCICFIE 525
            ++CI  +HE + V  ++K    +++ S LV    +  S+  S +C+  I+
Sbjct: 957  HICIDFVHEFLNVTEMEKQIFTIDLTSHLVLNYSIPKSLGVSKFCLNVIQ 1006


>AE014298-2595|AAF48750.2| 1105|Drosophila melanogaster CG8211-PA
            protein.
          Length = 1105

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = +1

Query: 376  NVCIKILHEKITVDSLKKYPSLVEVYSSLVEKVKVSISIQKSLYCICFIE 525
            ++CI  +HE + V  ++K    +++ S LV    +  S+  S +C+  I+
Sbjct: 957  HICIDFVHEFLNVTEMEKQIFTIDLTSHLVLNYSIPKSLGVSKFCLNVIQ 1006


>AY084109-1|AAL89847.1|  281|Drosophila melanogaster AT09390p
           protein.
          Length = 281

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 316 YGFPLNQILYINIFDKKDIFNVCIKILHEKIT 411
           + FPLN I++  IF+   +  VC+ IL + +T
Sbjct: 126 FTFPLNWIVFGCIFESLTLLVVCLHILEQDLT 157


>AE014134-2327|AAF53282.2|  281|Drosophila melanogaster CG16825-PA
           protein.
          Length = 281

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 316 YGFPLNQILYINIFDKKDIFNVCIKILHEKIT 411
           + FPLN I++  IF+   +  VC+ IL + +T
Sbjct: 126 FTFPLNWIVFGCIFESLTLLVVCLHILEQDLT 157


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,396,056
Number of Sequences: 53049
Number of extensions: 458343
Number of successful extensions: 882
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)