Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0201
(746 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0379 + 23628200-23628366,23629074-23629133,23630177-236302... 36 0.026
03_04_0142 - 17656751-17657554 33 0.32
05_03_0628 - 16367841-16369259 32 0.42
05_04_0355 - 20577189-20577275,20578001-20578129,20578252-205783... 32 0.56
11_06_0562 + 25003246-25003746,25004975-25005214,25005576-250060... 31 0.74
01_01_0792 - 6171400-6171957 31 0.74
04_03_0205 + 12649724-12650191,12651493-12652025,12652114-126522... 31 1.3
03_05_1082 - 30239385-30239561,30239937-30240009,30240382-302404... 31 1.3
02_01_0014 - 87215-87280,87358-87495,87593-87721,87801-87869,879... 31 1.3
01_07_0290 - 42542201-42542359,42542443-42542551,42542729-425435... 31 1.3
10_07_0116 - 13022648-13022701,13022781-13022835,13023050-130231... 29 3.0
10_01_0208 - 2228234-2228254,2228494-2228709,2228796-2228946,222... 29 3.0
04_03_0819 + 20018496-20019487,20019587-20019721,20019834-200199... 29 3.0
03_05_0589 + 25919965-25920331,25920461-25920780 29 3.0
02_04_0591 - 24159654-24160155,24160233-24160316,24160898-241609... 29 3.0
02_04_0028 + 19027510-19027983,19028087-19028278,19028369-190285... 29 3.0
12_02_1012 - 25281820-25281987,25282337-25282409,25283370-252834... 29 5.2
11_06_0557 - 24955837-24956214,24957225-24957395,24957576-249576... 29 5.2
04_04_0920 + 29429114-29430934 29 5.2
08_02_0678 - 19971416-19971930,19971970-19973347,19974122-199745... 28 6.9
08_02_0343 - 16043033-16043046,16043157-16043273,16043570-160436... 28 6.9
06_01_0574 + 4051723-4051805,4051913-4052366 28 6.9
04_03_0781 + 19572795-19573540,19573906-19573956,19574179-195742... 28 6.9
01_05_0573 + 23359968-23361044,23361112-23361255,23361458-23361841 28 6.9
12_01_0961 + 9566730-9566998,9567096-9567187,9567294-9567427,956... 28 9.1
11_06_0297 + 22056644-22058212,22058316-22058423,22058513-220586... 28 9.1
10_08_0042 - 14383143-14383628,14383647-14384609,14384697-143864... 28 9.1
07_03_0477 + 18552568-18553203 28 9.1
03_05_0499 + 24940443-24940994 28 9.1
03_03_0123 - 14621170-14621194,14621382-14623075 28 9.1
03_01_0138 - 1089063-1089266,1089590-1089671,1089937-1090390,109... 28 9.1
03_01_0092 - 731069-731434,731569-733080 28 9.1
01_01_0207 - 1773790-1774215,1775428-1775888,1776177-1776455,177... 28 9.1
>03_05_0379 +
23628200-23628366,23629074-23629133,23630177-23630209,
23630253-23630665,23631522-23632008,23632623-23633334
Length = 623
Score = 36.3 bits (80), Expect = 0.026
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +1
Query: 355 VAEGEAVESNDKGSADSLASPTTGRAPLSSLRCVLCYNSLASLTGTPKLMECLHSICETC 534
V + +A E N G A + ASP+ P SS+ C +C+ ++S M+C H C C
Sbjct: 169 VIQQQAEEKNGGGMAMA-ASPSPPPRPRSSVTCYVCFEDVSS--DAVSTMDCGHCFCNDC 225
>03_04_0142 - 17656751-17657554
Length = 267
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 397 ADSLASPTTGRAPLSSLRCVLCYNSLASLTGTPKLMECLHSICETCL 537
+D AS T R L C +C+ S + P ++ C H++C+ C+
Sbjct: 29 SDDEASSCTSRE--EGLECPICWESFNIVENVPYVLWCGHTMCKNCI 73
>05_03_0628 - 16367841-16369259
Length = 472
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +1
Query: 286 SAQPPSQLAVGSLPDAPVAGGSSVAEGEAVESNDKGS 396
S +PPSQ V + +A GG SV GEA E N K S
Sbjct: 152 SIEPPSQ-PVETTDEAKDLGGGSVVAGEAKEDNSKAS 187
>05_04_0355 -
20577189-20577275,20578001-20578129,20578252-20578371,
20578505-20578741,20578983-20579258,20579375-20579508,
20580006-20581632
Length = 869
Score = 31.9 bits (69), Expect = 0.56
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +1
Query: 451 CVLCYNSLASLTGTPKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPIC 621
C +C + + + P+++ C HS+C C I + A+++ A ++ CP+C
Sbjct: 17 CPVCLSPFDAASAAPRVLPCGHSLCGPC----IASLPPASAS--ASASAASLRCPLC 67
>11_06_0562 +
25003246-25003746,25004975-25005214,25005576-25006097,
25006184-25007248,25007350-25007656,25007761-25008001,
25008104-25008302,25008771-25008852,25008959-25009209,
25010061-25010219,25010220-25010603
Length = 1316
Score = 31.5 bits (68), Expect = 0.74
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 277 AEPSAQPPSQLAVGSLPDAPVAGGSSVAEGEAVESNDKGSADSLASPTTG--RAPLSSLR 450
A +A PP+ A G PV+GG A G A + +G+ + + G RAP S+
Sbjct: 58 ASRAASPPTTAAGGQGGGGPVSGGGGSAPGGAETAQRQGAPPAAVTSVQGAPRAPASTAA 117
Query: 451 CV 456
V
Sbjct: 118 TV 119
>01_01_0792 - 6171400-6171957
Length = 185
Score = 31.5 bits (68), Expect = 0.74
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Frame = +1
Query: 343 GGSSVAEGEAVESNDKG-SADSLAS-PTTG----RAPLSSLRCVLCYNSLASLTGTPKLM 504
GGS+ A+ EA E+N G SA ++A+ PT G A ++L C +C + + +L
Sbjct: 57 GGSASADQEAPEANSHGMSAAAIAALPTFGYEASAAAAAALDCAVCLGQVDAGEKVRQLP 116
Query: 505 ECLHSICETCL 537
+C H C+
Sbjct: 117 KCGHLFHAECV 127
>04_03_0205 +
12649724-12650191,12651493-12652025,12652114-12652239,
12652625-12652724,12652880-12652899,12653035-12653137,
12653213-12653351,12653448-12653662,12653772-12654320
Length = 750
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 4/100 (4%)
Frame = +1
Query: 334 PVAGGSSVAEGEAVESNDKGSADSLASPTTGRAPLSSLRCVLCYNSLASLTGTPKLMECL 513
P +V G+ +G+A + + L RC +C N + TP C
Sbjct: 461 PPISRKAVVTGDPRGKKMQGAARHTNNLSMRERLLKEFRCSICRNVMEEPVTTP----CA 516
Query: 514 HSICETCLKIKIEMI----KSANSTEFLGAERVTILCPIC 621
H+ C+ CL + + + + L A ++ CP C
Sbjct: 517 HNFCKKCLLGSYDNLSLTEERSRGGRTLRARKIVKKCPSC 556
>03_05_1082 -
30239385-30239561,30239937-30240009,30240382-30240432,
30240521-30240978,30241099-30241435,30241836-30241935,
30243880-30244003
Length = 439
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 430 APLSSLRCVLCYNSLASLTGTPKLMECLHSICETCLKIKIE 552
A ++ + C LC L T + ECLH+ C+ C+ KI+
Sbjct: 15 ALVACMTCPLCKGLLREATA---ITECLHTFCKECIMEKID 52
>02_01_0014 - 87215-87280,87358-87495,87593-87721,87801-87869,
87962-88042,88133-88237,88338-88568,88665-90197,
90660-90752,91477-92887,93184-93305,93479-93718,
94521-94682,94770-94937,95025-95141,95266-95376,
95919-96506
Length = 1787
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/90 (28%), Positives = 38/90 (42%)
Frame = +1
Query: 157 KTL*MENVNFQPSGEDIERALMDLGPLLGVTIKEEVPDDLAEPSAQPPSQLAVGSLPDAP 336
K L M+ + S ED E +D P+ DD++E L GSLP
Sbjct: 959 KDLEMKRAHGDSSSEDEE---LDTSPIEIDDALMIDDDDMSEDEEDDHEVLQDGSLPICV 1015
Query: 337 VAGGSSVAEGEAVESNDKGSADSLASPTTG 426
G V G+ +SN ++DS P++G
Sbjct: 1016 QDGVHDVKLGDTDDSNIGSASDSQVQPSSG 1045
>01_07_0290 -
42542201-42542359,42542443-42542551,42542729-42543516,
42543601-42543744,42543840-42544013,42544056-42544369,
42544467-42544636,42544916-42545043,42545125-42545185,
42545473-42545642,42545783-42547387,42547479-42547631,
42547747-42547905,42548066-42548236,42548357-42548404,
42548509-42548624,42548885-42549029,42549122-42549220
Length = 1570
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 496 KLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICRFECQQAN 645
+L + L+ IC CLKIK + ++F L P+C E +++N
Sbjct: 101 ELSQILNLICLRCLKIKNRKKSTLKGSKFTSCSHCQELPPLCVAEVKKSN 150
>10_07_0116 -
13022648-13022701,13022781-13022835,13023050-13023175,
13023274-13023340,13024104-13024200,13024362-13024461,
13024527-13024611,13024679-13024755,13024888-13024926,
13025001-13025038,13025118-13025208,13025536-13025628,
13025726-13025781,13025844-13025915,13026078-13026134,
13026397-13026495,13026599-13026964
Length = 523
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 139 LRTGDWKTL*MENVNFQPSGEDIERALMDLGPLLGVTIKEEV 264
LR+GDWK L ++ NF G+ I A+ + PLL ++EE+
Sbjct: 246 LRSGDWKDLEFKDYNFGAQGQPI--AIGYVQPLL--EVREEI 283
>10_01_0208 -
2228234-2228254,2228494-2228709,2228796-2228946,
2229031-2229268,2229394-2229604,2229765-2229943,
2230041-2230151,2230445-2231240
Length = 640
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 370 AVESNDKGSADSLASPTTGRAPLSSLRCVLCYNSLASLT 486
A+ SN S D A+ T G+AP ++ LC +A+ T
Sbjct: 45 ALPSNASSSPDHFATATAGQAPDAAYALALCRGDVANAT 83
>04_03_0819 + 20018496-20019487,20019587-20019721,20019834-20019978,
20020135-20020416,20020649-20020910,20021028-20021224,
20021315-20021425,20022341-20022392,20022442-20022584,
20023121-20023210,20023300-20023800,20024108-20024176,
20024866-20025011,20025475-20025530,20026140-20026286,
20027405-20027530,20027608-20027876,20028026-20028127
Length = 1274
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 268 DDLAEPSAQPPSQLAVGSLPDAPVAGGSSVAEGEAVESND 387
+D+ P PP Q +G P +A ++AE ++SND
Sbjct: 886 NDIVLPFVVPPPQYKLGDRPATSLAMREAMAEARILQSND 925
>03_05_0589 + 25919965-25920331,25920461-25920780
Length = 228
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 256 EEVPDDLAEPSAQPPSQLAVGSLPDAPVAGGSSV-AEGEAVESNDKGSADSLASPTT 423
++V +EP + P+ LA + PD P S+ AE EA E+ + DS A+ T
Sbjct: 122 DDVAAKSSEPRSATPAALAPAAAPDTPAMTPSAAPAEPEASEAPPVPADDSPAATVT 178
>02_04_0591 -
24159654-24160155,24160233-24160316,24160898-24160944,
24161035-24161103,24161259-24161310,24161693-24161775,
24162312-24162422,24162808-24163211,24163308-24163380,
24163460-24163510,24163882-24164073,24164176-24164302,
24164753-24164934,24165023-24165226,24165738-24165836
Length = 759
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +1
Query: 172 ENVNFQPSGEDIERALMDLGPLLGVTIKEEVPDDLAEPSAQPPSQLAVGSLPDAPVAGGS 351
E+++ PSG+D+ +D G L TI +E+P + A+ A+GS PV G+
Sbjct: 257 EDMDADPSGKDV----VDDGKLSERTISDELPQEPAKLEQDVTQTTAIGS-GATPVDNGT 311
Query: 352 SVAEGEAVESNDKGS 396
A E ++ S
Sbjct: 312 ESAAANPKELSNPDS 326
>02_04_0028 +
19027510-19027983,19028087-19028278,19028369-19028545,
19029568-19029663,19030487-19030618,19030950-19031008,
19031234-19031321,19031433-19031693
Length = 492
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 202 DIERALMDLGPLLGVTIKEEVPDDLAEPSAQPPSQLAVGSLPDAPVAGGSSVAEGEAVES 381
D E+AL GPL G ++ + P+A+ PS + P A G +++ EA ++
Sbjct: 155 DPEQALRKSGPLEGKLLQSSIRAYQGPPAAEKPSGAPPAATPPARNTGRLGLSDREADDA 214
Query: 382 -ND 387
ND
Sbjct: 215 LND 217
>12_02_1012 -
25281820-25281987,25282337-25282409,25283370-25283420,
25283523-25283932,25284083-25284413,25285340-25285439,
25287091-25287370
Length = 470
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 448 RCVLCYNSLASLTGTPKLMECLHSICETCLKIKI 549
RC+ C L + ECLH+ C C+ KI
Sbjct: 70 RCMTCPLCRRILRDATTVSECLHTFCRKCIYKKI 103
>11_06_0557 -
24955837-24956214,24957225-24957395,24957576-24957635,
24958419-24958623,24958710-24958953,24959103-24959394,
24959734-24960828,24960915-24961409,24961665-24961823,
24961893-24962387
Length = 1197
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +1
Query: 277 AEPSAQPPSQLAVGS---LPDAPVAGGSSVAEGEAVESNDKGSADSLASPTTG--RAPLS 441
A +A PP A G + PV+GG A G A + +G+ + A+ G RAP +
Sbjct: 56 ASRAASPPPPTAAGGQGGVGGGPVSGGGGSAPGGAATAQREGAPPAAATSVQGAPRAPAT 115
Query: 442 S 444
+
Sbjct: 116 A 116
>04_04_0920 + 29429114-29430934
Length = 606
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 256 EEVPDDLAEPSAQPPSQLAVGSLPDAPVAGGSS 354
+ +PD+ SA P+ + V LPDAP G S+
Sbjct: 52 KNLPDEFHAVSASTPAPVPVSPLPDAPKLGISN 84
>08_02_0678 - 19971416-19971930,19971970-19973347,19974122-19974518,
19974533-19974645,19977436-19977903,19977935-19978059,
19978192-19978452,19984254-19984647
Length = 1216
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 489 NTQAHGMSAFNLRDLPQNQDRDDKKCQQHRISWCRKG 599
N H + R P NQD D K + +I WC G
Sbjct: 1060 NRLEHARVPVHQRLGPVNQDHDPKDDEDRKIQWCPTG 1096
>08_02_0343 -
16043033-16043046,16043157-16043273,16043570-16043656,
16043899-16043914
Length = 77
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 350 DPPATGASGKLPTASWEGGCALGSARSSGTSSL 252
DP ATG S +P AS+ GG A + T+S+
Sbjct: 32 DPIATGTSHPVPAASFTGGLAQSMSHYIYTTSI 64
>06_01_0574 + 4051723-4051805,4051913-4052366
Length = 178
Score = 28.3 bits (60), Expect = 6.9
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Frame = +1
Query: 193 SGEDIERALMDLGPLL-GVTIKEEVPDDLAEPSAQPP---SQLAVGS--LPDAPVA---- 342
+ ED RA + ++ G ++ P D+A+ +A PP S A S L A VA
Sbjct: 39 TAEDAARAYDEAARIMCGPRVRTNFPHDVADEAAPPPPPHSAAAASSSFLSAALVAKLHR 98
Query: 343 -GGSSVAEGEAVESNDKGSADSLASPTTGRAPLSSL 447
+SV + SND S S ++ + RA + SL
Sbjct: 99 FNLASVQAAQRGNSNDDDSTTSSSAAASSRAVIPSL 134
>04_03_0781 +
19572795-19573540,19573906-19573956,19574179-19574251,
19574772-19574876
Length = 324
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 192 EWRRYRTGPDGPGAASWCDH 251
+W R TGP PGA++ DH
Sbjct: 91 DWLRLATGPASPGASAGSDH 110
>01_05_0573 + 23359968-23361044,23361112-23361255,23361458-23361841
Length = 534
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 211 RALMDLGPLLGVTIKEEVPDDLAEPSAQPPSQLAVGSLPDAPVAGGSSVAEGEAVESNDK 390
RALM + +L K+ V + + A +L V SLPD PV + ++ + + +
Sbjct: 4 RALMTMEKVLVQMEKDGVDSRMLDLGADCMCKLLVASLPDPPVYPDAVLSANDDDDLSGA 63
Query: 391 GSADSLAS 414
G+ D + +
Sbjct: 64 GAEDRIGA 71
>12_01_0961 +
9566730-9566998,9567096-9567187,9567294-9567427,
9567542-9567591,9569026-9569100,9569179-9569734
Length = 391
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/74 (28%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Frame = +1
Query: 325 PDAPVAGGSSVAEGE--AVESNDKGSADSLASPTTGRAPLSSLRCVLCYNSLASLTGTPK 498
PD G V E E V +K + A+ T+ + LR L + P
Sbjct: 116 PDTTADGKKEVKEEEKKTVVVGEKEACSEKAAATSELPCMDRLREELSCAICLEICFEPS 175
Query: 499 LMECLHSICETCLK 540
C HS C CLK
Sbjct: 176 TTPCGHSFCMKCLK 189
>11_06_0297 +
22056644-22058212,22058316-22058423,22058513-22058678,
22059000-22059056,22059382-22059479,22059556-22059765,
22060469-22060582,22060819-22060948,22061165-22061298,
22062279-22062359,22062798-22062872,22063210-22063221
Length = 917
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 728 HCWSPLNAPLFPTCSKAIFSIKKRWS 651
HC SP N +FP+ + F+I WS
Sbjct: 797 HCGSPKNTDVFPSNTPHFFTIGLDWS 822
>10_08_0042 -
14383143-14383628,14383647-14384609,14384697-14386443,
14387901-14388010,14388767-14389003
Length = 1180
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +1
Query: 514 HSICETCLKIKIEMIKSANSTEFLGAERVTI----LCPICRFECQQANMIDQRFFIEK 675
HS+ E LK K + KS E + + +T+ LCP+ + C+Q ++ ++K
Sbjct: 795 HSLMEGILK-KAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKK 851
>07_03_0477 + 18552568-18553203
Length = 211
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 271 DLAEPSAQPPSQLAVGSLPDAPVAGGS 351
D+A+ A PP+QLA P AP AGG+
Sbjct: 47 DVADAFALPPAQLAAAHAP-APGAGGA 72
>03_05_0499 + 24940443-24940994
Length = 183
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/63 (20%), Positives = 27/63 (42%)
Frame = +1
Query: 349 SSVAEGEAVESNDKGSADSLASPTTGRAPLSSLRCVLCYNSLASLTGTPKLMECLHSICE 528
S++ V + ++ +A S +SP G A + C +C + +++ C H
Sbjct: 58 SALGGATTVTTYEQAAAASSSSPAAGAAAEGADTCAICCQEYSGADKVRRVVRCSHFFHA 117
Query: 529 TCL 537
C+
Sbjct: 118 GCV 120
>03_03_0123 - 14621170-14621194,14621382-14623075
Length = 572
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 184 FQPSGEDIERALMDLGPLLGVTIKEEVPD 270
FQ G DI+RAL+D P L + + PD
Sbjct: 166 FQALGADIQRALVDCRPALALFLASLGPD 194
>03_01_0138 -
1089063-1089266,1089590-1089671,1089937-1090390,
1091094-1091634
Length = 426
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +1
Query: 361 EGEAVESNDKGSADSLASPTTGRAPLSSLRCVLCYNSLASLTGTPKLMEC 510
E + E+ND G D + TT L S +L Y SL + MEC
Sbjct: 13 EDTSPEANDSGELDDQSKSTTPEMVLHS-SIILIYGFTKSLIASTGSMEC 61
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 316 GSLPDAPVAGGSSVAEGEAVESNDKGSAD-SLASPTTGR 429
G LP VAGG+ G A +++KGS +A T G+
Sbjct: 480 GGLPVVSVAGGNGNGNGVAATTDNKGSKQVPVAKETAGQ 518
>01_01_0207 -
1773790-1774215,1775428-1775888,1776177-1776455,
1776601-1776724,1776811-1777020
Length = 499
Score = 27.9 bits (59), Expect = 9.1
Identities = 20/73 (27%), Positives = 28/73 (38%)
Frame = +1
Query: 241 GVTIKEEVPDDLAEPSAQPPSQLAVGSLPDAPVAGGSSVAEGEAVESNDKGSADSLASPT 420
GV + DDL EP +P AVGS A E V N + + +
Sbjct: 58 GVAAEVAKNDDLEEPLLEPEGVTAVGSGGGDGTASDGGENELHEVPKNPMATRFAFRATD 117
Query: 421 TGRAPLSSLRCVL 459
P+S+ R +L
Sbjct: 118 ANATPVSTYRGML 130
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,659,426
Number of Sequences: 37544
Number of extensions: 515036
Number of successful extensions: 1756
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1755
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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