Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0201
(746 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4351| Best HMM Match : zf-B_box (HMM E-Value=1.3e-25) 44 1e-04
SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21) 38 0.007
SB_31924| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00073) 37 0.020
SB_49217| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.035
SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.035
SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08) 36 0.046
SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09) 36 0.046
SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.061
SB_14351| Best HMM Match : zf-B_box (HMM E-Value=2.3e-12) 35 0.061
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.081
SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23) 34 0.11
SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45) 32 0.43
SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27) 32 0.57
SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10) 31 0.99
SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09) 30 1.7
SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 30 1.7
SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 30 1.7
SB_29658| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0012) 30 1.7
SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 30 1.7
SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 30 1.7
SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18) 30 2.3
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 29 4.0
SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18) 29 4.0
SB_25675| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 29 4.0
SB_23715| Best HMM Match : Extensin_2 (HMM E-Value=0.12) 29 4.0
SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14) 29 4.0
SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15) 29 4.0
SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 29 4.0
SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 29 4.0
SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 29 4.0
SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05) 29 4.0
SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 29 4.0
SB_59209| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20) 29 5.3
SB_25302| Best HMM Match : Ribosomal_60s (HMM E-Value=0.25) 29 5.3
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 28 7.0
SB_42244| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_35586| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_18522| Best HMM Match : DUF960 (HMM E-Value=8.2) 28 7.0
SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28) 28 7.0
SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18) 28 7.0
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 28 7.0
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 28 7.0
SB_5852| Best HMM Match : 3_5_exonuc (HMM E-Value=3.4e-07) 28 7.0
SB_37930| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05) 28 9.2
SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_25773| Best HMM Match : 7tm_1 (HMM E-Value=1.68156e-44) 28 9.2
SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0) 28 9.2
SB_20928| Best HMM Match : NHL (HMM E-Value=0) 28 9.2
SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 28 9.2
SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_53750| Best HMM Match : DUF408 (HMM E-Value=5.5) 28 9.2
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_4351| Best HMM Match : zf-B_box (HMM E-Value=1.3e-25)
Length = 662
Score = 44.4 bits (100), Expect = 1e-04
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 13/111 (11%)
Frame = +1
Query: 451 CVLCYNSLASLTGTPKLMECLHSICETCLKIKI----EMIKSANSTEFLGAERVTIL--- 609
C +C S S T PKL+ CLHS C CL+ K + + NST + + L
Sbjct: 22 CGICRKS--SATSNPKLLPCLHSFCFGCLEEKFDQQQQQEQKQNSTTSSSSASSSPLQRL 79
Query: 610 -CPICRFECQQ-----ANMIDQRFFIEKMALEQVGNNGALSGDQQCNSCED 744
CP C E A +D +F +E + + S D++C SCED
Sbjct: 80 KCPTCGQEFLVPPKGIAGFLDNQFMLESLGRQ---TRKKESTDRECTSCED 127
>SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 41.9 bits (94), Expect = 5e-04
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Frame = +1
Query: 424 GRAPLSSLRCVLCYNSLASLTGTPKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVT 603
G +P SL C C+ PK+++CLH+ C+ CL + + LGA +
Sbjct: 8 GYSP-QSLNCRACHKVFTE----PKILDCLHTFCQKCL----------GTHDILGAGTNS 52
Query: 604 ILCPICR----FECQQANMIDQRFFIEKMALEQVGNNGALSGDQQCNSCED 744
I+CP+CR + F + AL+Q+ + C +CED
Sbjct: 53 IVCPLCRKPTPIPESGVESLPSNFLLNN-ALDQLSVKSSKEYILHCTNCED 102
>SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21)
Length = 645
Score = 38.3 bits (85), Expect = 0.007
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Frame = +1
Query: 394 SADSLASPTTGRAPLSSLRCVLCYNSLASLTGTPKLMECLHSICETCLKIKIEMIKSANS 573
S S++S ++ L C +C PK++ C H+ C+ CL+ K+ S
Sbjct: 3 SGSSISSQSSIEKVREELTCSVCLEQFRE----PKMLPCFHTFCKECLE------KTKQS 52
Query: 574 TEFLGAERVTILCPICRFECQ--QANMIDQ--RFFIEKMALEQVGNNGALSGDQQCNSCE 741
F G +LCP CR + + MI + FI L+ +G SG+ +C SC
Sbjct: 53 --FRG----NLLCPTCRTKTSVTEHEMIQKLPNNFIVNRVLDALGAEN--SGELKCGSCN 104
Query: 742 D 744
+
Sbjct: 105 E 105
>SB_31924| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00073)
Length = 498
Score = 36.7 bits (81), Expect = 0.020
Identities = 33/151 (21%), Positives = 62/151 (41%), Gaps = 11/151 (7%)
Frame = +1
Query: 325 PDAPVAGGSSVAEGEAVESNDKGSADSLASPTT--GRAPLSSLRCVLCYNSLASLTGTPK 498
P P++ +V +G + S + + + + TT + + C +C T PK
Sbjct: 281 PTTPLSLVQAVFQG--LTSQYRVFEERMMADTTEISKVIIDECTCGVCQEEFNEKTRVPK 338
Query: 499 LMECLHSICETCLKIKI----EMIKSANSTEFLGA-ERVTILCPIC--RFECQQANM--I 651
L+ C H++C+ C+ + M + NS + A + + CP C R +Q N+ +
Sbjct: 339 LLHCSHTLCKACVSALLGGGRGMYREMNSNLYGRANDHDSFKCPFCNARQVTEQGNVDNL 398
Query: 652 DQRFFIEKMALEQVGNNGALSGDQQCNSCED 744
I ++ GN A + C+D
Sbjct: 399 PNNLTILRLLDFTEGNQAAKELKKMVEKCKD 429
>SB_49217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 35.9 bits (79), Expect = 0.035
Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 9/107 (8%)
Frame = +1
Query: 451 CVLCYNSLASLTGTPKLMECLHSICETCLKIKI----EMIKSANSTEFLGA-ERVTILCP 615
C +C T PKL+ C H++C+ C+ + M + NS + A + + CP
Sbjct: 220 CGVCQEEFNEKTRVPKLLHCSHTLCKACVSALLGGGRGMYREMNSILYGRANDHDSFKCP 279
Query: 616 IC--RFECQQANM--IDQRFFIEKMALEQVGNNGALSGDQQCNSCED 744
C R +Q N+ + I ++ GN A + C+D
Sbjct: 280 FCNARQVTEQGNVDNLPNNLTILRLLDFTEGNQAAKELKKMVEKCKD 326
>SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 35.9 bits (79), Expect = 0.035
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Frame = +1
Query: 436 LSSLRCVLCYNSLASLTGTPKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCP 615
L +L +L +++ P++ CLHS C CL + A S + + I CP
Sbjct: 7 LENLEELLTCRQCSNVFKNPRITPCLHSFCAECLN------EIARSRPY----QAYIACP 56
Query: 616 ICRFECQQA-----NMIDQRFFIEKMALEQVGNNGALSGDQQCNSC 738
C++E ++ N + FF+ ++ V + S D C +C
Sbjct: 57 TCKYEIRKPEGGLFNTLPPNFFLNRLHDIYVAKRRSYS-DSNCGNC 101
>SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08)
Length = 599
Score = 35.5 bits (78), Expect = 0.046
Identities = 30/113 (26%), Positives = 50/113 (44%)
Frame = +1
Query: 403 SLASPTTGRAPLSSLRCVLCYNSLASLTGTPKLMECLHSICETCLKIKIEMIKSANSTEF 582
S+A T +S + C LC P+++ CLH+ C CL+ +E K +
Sbjct: 10 SMADSETTPNNVSDVTCSLCLEQYQD----PRVLACLHTYCRHCLESLVEHSKECTVSCP 65
Query: 583 LGAERVTILCPICRFECQQANMIDQRFFIEKMALEQVGNNGALSGDQQCNSCE 741
E++ I + +ID IEKM+++Q N G +S C +C+
Sbjct: 66 QCREKIEISVEEVKSLKVDFMLID---LIEKMSVDQ-ENKGDIS--ITCETCQ 112
>SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09)
Length = 474
Score = 35.5 bits (78), Expect = 0.046
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +1
Query: 406 LASPTTGRA--PLS-SLRCVLCYNSLASLTGTPKLMECLHSICETCLK 540
+AS +T R P+ SL C C N + P+++ CLHSIC+TCL+
Sbjct: 1 MASGSTERVQPPVGVSLYCPACSNVIKD----PRILPCLHSICKTCLE 44
>SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 35.1 bits (77), Expect = 0.061
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = +1
Query: 373 VESNDKGSADSLASPTTGRAPLSSLR----CVLCYNSLASLTGTPKLMECLHSICETCLK 540
+ N S+ SP + L SLR C LC+ + + PK+++C H+ C CL
Sbjct: 68 IRGNPSPSSRRERSPLQMASILDSLRQEAECSLCHKTPSE----PKILKCFHTFCNECLT 123
Query: 541 IKIEMIKSANSTEFLGAERVTILCPICR 624
K S EF G + T CP C+
Sbjct: 124 EK--------SAEFKG-DGETFSCPSCK 142
>SB_14351| Best HMM Match : zf-B_box (HMM E-Value=2.3e-12)
Length = 549
Score = 35.1 bits (77), Expect = 0.061
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +1
Query: 493 PKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPIC--RFECQQANMIDQRFF 666
P+L+ CLHS+C+ CLK IE A+ I CP+C EC ++
Sbjct: 31 PRLLPCLHSLCKKCLK-DIEQ-----------AQEGAIACPVCLTDVECHLEELLPN--V 76
Query: 667 IEKMALEQVGNNGALSGDQQCNSCE 741
+ + L++ N + C CE
Sbjct: 77 LARSKLKERENRELAKRAEPCGGCE 101
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 34.7 bits (76), Expect = 0.081
Identities = 29/112 (25%), Positives = 49/112 (43%)
Frame = +1
Query: 406 LASPTTGRAPLSSLRCVLCYNSLASLTGTPKLMECLHSICETCLKIKIEMIKSANSTEFL 585
+A T +S + C LC P+++ CLH+ C CL+ +E K +
Sbjct: 2 MADSETKPKDVSDVTCSLCLGQYQD----PRVLACLHTYCRHCLESLVEHSKECTVSCPQ 57
Query: 586 GAERVTILCPICRFECQQANMIDQRFFIEKMALEQVGNNGALSGDQQCNSCE 741
E++ I + +ID IEKM+++Q N G +S C +C+
Sbjct: 58 CREKIEISVEEVKSLKVDFMLID---LIEKMSVDQ-ENKGDIS--ITCETCQ 103
>SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23)
Length = 581
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 355 VAEGEAVESNDKGSADSLASPTTGRAPLSSLR--CVLCYNSLASLTGTPKLMECLHSICE 528
+AE + S + D +P + P S++ C LC+ A+ P+L+ CLH+ C+
Sbjct: 111 MAEEHKMASVQRDDLDLGPTPDSPMMPGSNVNLFCPLCHEMFAN----PRLLPCLHTFCK 166
Query: 529 TCLK 540
CL+
Sbjct: 167 RCLE 170
>SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 33.1 bits (72), Expect = 0.25
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
Frame = +1
Query: 445 LRCVLCYNSLASLTGTPKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICR 624
L C LC+ + PKL+ CLHS C CL E + + N F CP C
Sbjct: 18 LNCSLCHRLIRG----PKLLPCLHSFCLACL----EDLVTENDVGF--------NCPQCH 61
Query: 625 FECQQANM----IDQRFFIEKMALEQVGNNGALSGDQQCNSCE 741
E + + + FF++ M L+ N + S C +C+
Sbjct: 62 TEAKVSKAALRGLPTNFFLDNM-LDIALMNSSDSKPVPCTNCD 103
>SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45)
Length = 784
Score = 32.3 bits (70), Expect = 0.43
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 493 PKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPIC 621
PKL+ CLHS C++C++ A TE + + ++CP+C
Sbjct: 72 PKLLHCLHSFCQSCIE------GLARKTE---DDCLELICPVC 105
>SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 31.9 bits (69), Expect = 0.57
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = +1
Query: 493 PKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICR----FECQQANMIDQR 660
PK++ CLHS C+ CL KS S ERV ++CP C+ +
Sbjct: 27 PKVLPCLHSFCQNCLD------KSIRS-----QERV-LVCPTCQCSVPVPAKGIEAFPVN 74
Query: 661 FFIEKMALEQVGNNGALSGDQQCNSCED 744
FFI M A+ +C +CED
Sbjct: 75 FFINNMLTVL-----AVQNPTKCTNCED 97
>SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27)
Length = 1387
Score = 31.9 bits (69), Expect = 0.57
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Frame = +1
Query: 328 DAPVAGGSSVAEGEAVESNDKGSADSLASPTTG--------RAPLSSLRCVLCYNSLASL 483
D PVA S A A++ +++A+P R+ S C +C S
Sbjct: 611 DPPVAAHDS-ASTLALDRGSHDGVNNMAAPEERSKEAEGIIRSAHESSCCPICSRPFKS- 668
Query: 484 TGTPKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPIC 621
PK++ CLH+ C C+K E+++S LG ++T+ CP C
Sbjct: 669 ---PKILPCLHTYCSDCVK---EIVRSR-----LG--KLTLQCPKC 701
>SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 31.5 bits (68), Expect = 0.75
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 418 TTGRA-PLSSLRCVLCYNSLASLTGTPKLMECLHSICETCLKIKIEMIKSANSTEFLGAE 594
TT A L L C +C + PK + C+H +C CL+ +M +S
Sbjct: 9 TTAMAVQLDELLCPICLDEFKE----PKTLSCMHDLCRKCLE---DMAARESS------- 54
Query: 595 RVTILCPICRFE 630
RV I CP+CR E
Sbjct: 55 RV-IRCPLCRSE 65
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 31.1 bits (67), Expect = 0.99
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 451 CVLCYNSLASLTGTPKLMECLHSICETCL 537
CVLC L T ++ECLHS C +C+
Sbjct: 1366 CVLCGGYLVDAT---TIVECLHSFCRSCI 1391
>SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10)
Length = 691
Score = 31.1 bits (67), Expect = 0.99
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = +1
Query: 406 LASPTTGRAPLSSLRCVLCYNSLASLTGTPKLMECLHSICETCLKIKIEMIKSANSTEFL 585
+A+ T + C+LC + P+L+ CLH+ C+ CL+ + +
Sbjct: 1 MATSTPQEKDEKDVTCLLCLDIFTD----PRLLPCLHTYCKKCLEDLVSQCQ-------- 48
Query: 586 GAERVTILCPICRFE 630
++ I CP CR E
Sbjct: 49 --KKGEIYCPQCRHE 61
>SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09)
Length = 207
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 427 RAPLSSLRCVLCYNSLASLTGTPK-LMECLHSICETCL 537
RA LRC +CY + P+ L CLHS C+ CL
Sbjct: 60 RALNDELRCSVCYEVFSD----PRTLTACLHSFCKECL 93
>SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 604
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 406 LASPTTGRAPLSSLRCVLCYNSLASLTGTPKLMECLHSICETCLKIKIE 552
+A T +S + C LC P+++ CLH+ C CL+ +E
Sbjct: 2 MADSETKPKDVSDVTCSLCLEQYQD----PRVLACLHTYCRHCLESLVE 46
>SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +1
Query: 448 RCVLCYNSLASLTGTPKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICRF 627
+C LC L PK++ C H C+ CL+ + T G + + CP C
Sbjct: 13 KCSLCSEVLTE----PKILRCFHVYCQKCLQAE---------TNEAGEKSKILKCPCCLE 59
Query: 628 ECQQAN 645
+ + AN
Sbjct: 60 KTETAN 65
>SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 291
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 451 CVLCYNSLASLTGTPKLMECLHSICETCL 537
CVLC L T ++ECLHS C C+
Sbjct: 48 CVLCGGYLVDAT---TIIECLHSFCRCCI 73
>SB_29658| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0012)
Length = 450
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 445 LRCVLCYNSLASLTGTPKLMECLHSICETCL 537
L C +CY+ P + C H+IC+ CL
Sbjct: 12 LTCPICYHEFEDRQRGPISLACGHTICKACL 42
>SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 462
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 406 LASPTTGRAPLSSLRCVLCYNSLASLTGTPKLMECLHSICETCLKIKIE 552
+A T +S + C LC P+++ CLH+ C CL+ +E
Sbjct: 2 MADSETKPKDVSDVTCSLCLEQYQD----PRVLACLHTYCRHCLESLVE 46
>SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 510
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 451 CVLCYNSLASLTGTPKLMECLHSICETCL 537
CVLC L T ++ECLHS C C+
Sbjct: 16 CVLCGGYLVDAT---TIIECLHSFCRCCI 41
>SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18)
Length = 316
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 451 CVLCYNSLASLTGTPKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICRFE 630
C +C L P+++ CLHS C CL+ E+ + R ++CP+C+ E
Sbjct: 15 CSICIEHL----NDPRVLPCLHSFCRHCLE---ELAVHSEG-------RGKLVCPLCKAE 60
Query: 631 CQ 636
Q
Sbjct: 61 FQ 62
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 493 PKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICRFECQQ 639
P+++ CLHS C CL+ E+ + R ++CP+C+ E Q+
Sbjct: 24 PRVLPCLHSFCRHCLE---ELAVHSEG-------RGKLVCPLCKAEFQK 62
>SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 493 PKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICRFECQ 636
P+++ CLHS C CL+ E+ + R ++CP+C+ E Q
Sbjct: 25 PRVLPCLHSFCRHCLE---ELAVHSEG-------RGKLVCPLCKAEFQ 62
>SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 119
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 493 PKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICRFECQ 636
P+++ CLHS C CL+ E+ + R ++CP+C+ E Q
Sbjct: 25 PRVLPCLHSFCRHCLE---ELAVHSEG-------RGKLVCPLCKAEFQ 62
>SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18)
Length = 355
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +1
Query: 445 LRCVLCYNSLASLTGTPKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICR 624
+RC +C P+++ C HS C CL+ E+ + R ++CP+C+
Sbjct: 13 VRCSICIEHF----NDPRVLPCFHSFCRHCLE---ELAVHSEG-------RGKLVCPLCK 58
Query: 625 FECQ 636
E Q
Sbjct: 59 AEFQ 62
>SB_25675| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 485
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 184 FQPSGEDIERALMDLGPLLGVTIKEEVPDDLAEPSAQPP 300
+QP +E+A++ G L + KE P++ QPP
Sbjct: 235 WQPEESTVEKAIIKPGKLTNIEFKETEPEEKQVVKQQPP 273
>SB_23715| Best HMM Match : Extensin_2 (HMM E-Value=0.12)
Length = 683
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 184 FQPSGEDIERALMDLGPLLGVTIKEEVPDDLAEPSAQPP 300
+QP +E+A++ G L + KE P++ QPP
Sbjct: 552 WQPEESTVEKAIIKPGKLTNIEFKETEPEEKEVVKQQPP 590
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 184 FQPSGEDIERALMDLGPLLGVTIKEEVPDDLAEPSAQPP 300
+QP +ERA++ G L + E PD QPP
Sbjct: 188 WQPEESTVERAIIKPGKLTNIEFGETEPDGKQVVKQQPP 226
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 184 FQPSGEDIERALMDLGPLLGVTIKEEVPDDLAEPSAQPP 300
+QP +ERA++ G L + E PD QPP
Sbjct: 400 WQPEESTVERAIIKPGKLTNIEFGETEPDGKEVVKQQPP 438
>SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 493 PKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICRFECQ 636
P+++ CLHS C CL+ E+ + R ++CP+C+ E Q
Sbjct: 25 PRVLPCLHSFCRHCLE---ELAVHSEG-------RGKLVCPLCKAEFQ 62
>SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14)
Length = 594
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/63 (26%), Positives = 26/63 (41%)
Frame = +1
Query: 436 LSSLRCVLCYNSLASLTGTPKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCP 615
+ + C LC P+++ CLH+ C CL+ +E K T+ CP
Sbjct: 11 VKDVTCCLCLEQYQD----PRVLACLHTYCRHCLESLVEHSKEC-----------TVSCP 55
Query: 616 ICR 624
CR
Sbjct: 56 QCR 58
>SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15)
Length = 629
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 493 PKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICRFECQ 636
P+++ CLHS C CL+ + A +E G ++CP+C+ E Q
Sbjct: 145 PRVLPCLHSFCRHCLE------ELAVHSEGKG----KLVCPLCKSEFQ 182
>SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 493 PKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICRFECQ 636
P+++ CLHS C CL+ E+ + R ++CP+C+ E Q
Sbjct: 25 PRVLPCLHSFCRHCLE---ELAVHSEG-------RGKLVCPLCKAEFQ 62
>SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 82
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 493 PKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICRFECQQA 642
P+++ C HS C CL+ E+ + R ++CP+C+ E Q A
Sbjct: 25 PRVLPCFHSFCRHCLE---ELAVHSEG-------RGKLVCPLCKAEFQSA 64
>SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 493 PKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICRFECQ 636
P+++ CLHS C CL+ E+ + R ++CP+C+ E Q
Sbjct: 25 PRVLPCLHSFCRHCLE---ELAVHSEG-------RGKLVCPLCKAEFQ 62
>SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 493 PKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICRFECQ 636
P+++ CLHS C CL+ E+ + R ++CP+C+ E Q
Sbjct: 30 PRVLPCLHSFCRHCLE---ELAVHSEG-------RGKLVCPLCKAEFQ 67
>SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05)
Length = 576
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 493 PK-LMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICR 624
PK L C H++C CL E I + NS+ F + CPICR
Sbjct: 32 PKSLPSCAHNVCRECL----EKITARNSSRF-------VECPICR 65
>SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 463
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 493 PKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICRFECQ 636
P+++ CLHS C CL+ E+ + R ++CP+C+ E Q
Sbjct: 25 PRVLPCLHSFCRHCLE---ELAVHSEG-------RGKLVCPLCKAEFQ 62
>SB_59209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1002
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +1
Query: 241 GVTIKEEVP-DDLAEPSAQPPSQLAVGSLPDAPVAGGSSVAEG-EAVE-SNDKGS-ADSL 408
G+T ++ P + PSAQPP+ + + A + G ++ G EAV + GS AD L
Sbjct: 184 GITGQDRAPIPPSSSPSAQPPTTTSTTTTTTAAIEGAATTPTGTEAVNVFEESGSPADPL 243
Query: 409 ASPT 420
P+
Sbjct: 244 LLPS 247
>SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 28.7 bits (61), Expect = 5.3
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Frame = +1
Query: 493 PKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICRFECQQANMI-----DQ 657
PK + CLH+ C CLK K+ T+ ER+ CP C +E + +
Sbjct: 28 PKRLPCLHAFCCHCLK------KTQRGTKL--CERMR--CPTCDYELDLVDSVAIDALPV 77
Query: 658 RFFIEKMALEQVGNNGALSGDQQCNSCE 741
++I ++ + G L + CNSCE
Sbjct: 78 PYYISRVQEIVRCHRGKL--ELACNSCE 103
>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
Length = 470
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +1
Query: 451 CVLCYNSLASLTGTPKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICRFE 630
C +C P+L+ CLH+ C CL+ + E G + ++CP+C+ E
Sbjct: 15 CAICIEHFTD----PRLLPCLHTFCRHCLE---------DLAEHSGKGK--LVCPLCKVE 59
Query: 631 CQQA 642
+ A
Sbjct: 60 YEIA 63
>SB_25302| Best HMM Match : Ribosomal_60s (HMM E-Value=0.25)
Length = 305
Score = 28.7 bits (61), Expect = 5.3
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 368 KQWKAMIKVLQIPWHRP 418
K WK+++KV+ +PW P
Sbjct: 65 KMWKSLLKVVDLPWDTP 81
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 162 FVNGKRELPTEWRRYRTGPDGPGAASWCDHQGRGAR*SGRAK 287
FV K + +W++ RTG DH G G + GR +
Sbjct: 342 FVQSKSD-KFDWQKSRTGTPSSNTGPTSDHTGNGGKKDGRGQ 382
>SB_42244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 870
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 306 LGGWLCTWLGQIIGHLFLDGHTKKRPQV 223
LG W C WLG +I +T++ P +
Sbjct: 11 LGSWACAWLGNMISLSVRRENTERSPAI 38
>SB_35586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -2
Query: 319 SQQQVGRVAVHLARPDHRAPLP*WSHQEAAPGPSGPVLYLRHSVGSSR 176
+Q + R+A + R D P+P + + A GP+ P+ Y S G ++
Sbjct: 5 TQSLIARIAGYDIRQDECEPVPERASRSRASGPAHPLPYRIRSAGPAQ 52
>SB_18522| Best HMM Match : DUF960 (HMM E-Value=8.2)
Length = 368
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 314 LGVCLMHQSQVDLQWQKGKQWKAMIKVLQIPWHRPP 421
LG C H S+ + W++ + K IKV I H+PP
Sbjct: 122 LGHCDRHVSEANYSWRQNLKPKTSIKVFFIR-HKPP 156
>SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = +1
Query: 445 LRCVLCYNSLASLTGTPKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICR 624
+ C +CY PK C H+IC CL + +I+ A F CPICR
Sbjct: 23 ISCPICYEDFEEPKCLPK---CAHNICRECL---LGIIEKAQLERF--------ECPICR 68
>SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28)
Length = 562
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 448 RCVLCYNSLASLTGTPKLMECLHSICETCLKIKIEMIKSANS 573
RC +C + L P C H ICE+C ++ + + + N+
Sbjct: 33 RCTICKHVLQE----PLQTTCGHRICESCFELSLRHLNNNNN 70
>SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18)
Length = 398
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +1
Query: 424 GRAPLSSLRCVLCYNSLASLTGTPKLMECLHSICETCLKIKIE 552
G+ S C +C T T +L+ C H CE CL +E
Sbjct: 253 GKKRYESKSCPICLEEFTPETPT-RLLVCGHKYCEPCLSRWLE 294
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 280 EPSAQPPSQLA--VGSLPDAPVAGGSSVAEGEAVESNDKGSADSLASPTTGRAPLSSL 447
E +A P S LA + + PD + S+VA V + +S A+P T AP S++
Sbjct: 912 ETTAAPESTLAPDITAAPDTTMVPESTVAPDTTVAPESTVAPESTAAPDTTVAPESTV 969
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 268 DDLAEPSAQPPSQLAVGSL--PDAPVAGGSSVAEGEAVESNDKGSADSLASPTTGRAPLS 441
D + S P S +A S D+ VA + +A+G + S + ++ ASP T AP++
Sbjct: 3184 DITPQTSVSPDSTVAPESTVAADSTVASETIIAQGTTLASKTTVATETTASPETTVAPVT 3243
Query: 442 S 444
+
Sbjct: 3244 T 3244
>SB_5852| Best HMM Match : 3_5_exonuc (HMM E-Value=3.4e-07)
Length = 653
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 172 ENVNFQPSGEDIERALMDLGPLL 240
ENVNF+ GE++ + + +LG LL
Sbjct: 562 ENVNFKSHGEEVVKRVRELGKLL 584
>SB_37930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 675 FLNKETLVYHVCLLTFKPAYRTQYC 601
FL K +L YH+ L T K Y+ Q C
Sbjct: 194 FLKKSSLTYHLTLHTGKRPYQCQEC 218
>SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05)
Length = 406
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +1
Query: 493 PK-LMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICR 624
PK L C H++C CL E I NS F + CPICR
Sbjct: 32 PKSLPSCAHNVCRECL----EKITKRNSIRF-------VECPICR 65
>SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 649
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = +1
Query: 427 RAPLSSLRCVLCYNSLASLTGTPKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTI 606
R L C +C + P L+ C HS C C++ E++ + E+ +
Sbjct: 12 RGLAEQLMCPVCLGEYKN----PMLLRCYHSFCLRCVQ---ELLHQS-------GEKGVV 57
Query: 607 LCPICRFECQQAN 645
CP CR E + N
Sbjct: 58 KCPQCRTEMEIPN 70
>SB_25773| Best HMM Match : 7tm_1 (HMM E-Value=1.68156e-44)
Length = 906
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 509 HSMSLGVPVKLANEL*HSTHLKLDRGARP 423
H+ + G P LA + H T ++LD G RP
Sbjct: 184 HTSTWGSPYLLAFKTHHRTRIRLDAGGRP 212
>SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 2726
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 358 AEGEAVESNDKGSADSLASPTT 423
A GEAVESND+ + L SPTT
Sbjct: 715 ASGEAVESNDQ-QPEPLTSPTT 735
>SB_20928| Best HMM Match : NHL (HMM E-Value=0)
Length = 795
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 451 CVLCYNSLASLTGTPKLMECLHSICETCL 537
C C N+ + PK++ CLH+ C CL
Sbjct: 15 CPKCMNAYEN----PKVLPCLHTFCSQCL 39
>SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 89
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 493 PKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICRFECQQ 639
P+++ C HS C CL+ E+ + R ++CP+C+ E Q+
Sbjct: 25 PRVLPCFHSFCRHCLE---ELAVHSEG-------RGKLVCPLCKAEFQK 63
>SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1907
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 184 FQPSGEDIERALMDLGPLLGVTIKEEVPDDLAEPSAQPP 300
+QP +ERA++ G L + E PD QPP
Sbjct: 21 WQPEESTVERAIIKPGKLTNIEFGETEPDGKKVVKQQPP 59
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 184 FQPSGEDIERALMDLGPLLGVTIKEEVPDDLAEPSAQPP 300
+QP +ERA++ G L + E PD QPP
Sbjct: 97 WQPEESTVERAIIKPGKLTNIEFGETEPDGKEVVKQQPP 135
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 184 FQPSGEDIERALMDLGPLLGVTIKEEVPDDLAEPSAQPP 300
+QP +ERA++ G L + E PD QPP
Sbjct: 173 WQPEESTVERAIIKPGKLTNIEFGETEPDGKEVVKQQPP 211
>SB_53750| Best HMM Match : DUF408 (HMM E-Value=5.5)
Length = 274
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 184 FQPSGEDIERALMDLGPLLGVTIKEEVPDDLAEPSAQPP 300
+QP +ERA++ G L + E PD QPP
Sbjct: 143 WQPEESTVERAIIKPGKLTNIEFGETEPDGKEVVKQQPP 181
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 229 PGPSGPVLYLRHSVGSSRFPFTKFSNLRYGA 137
PGP GP +Y R +VG+ TK S + G+
Sbjct: 591 PGPQGPQVYFRRAVGNLNRQETKESVIITGS 621
>SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1022
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = +1
Query: 493 PKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICRFECQQA----NMIDQR 660
P++ CLHS C+ C+ T+ + + +CP C+ + Q + + Q
Sbjct: 415 PRVAPCLHSFCKECV------------TKLVTERQGKFVCPDCQADFQMSVKDVENLSQN 462
Query: 661 FFIEKMALEQVGNNGALSGDQQCNSCED 744
F I + ++ A D +C +C +
Sbjct: 463 FSINNLMPILAIHSNASRKDLKCENCNN 490
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,841,182
Number of Sequences: 59808
Number of extensions: 586457
Number of successful extensions: 1740
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1734
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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