Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0200
         (659 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0FDQ8 Cluster: Putative uncharacterized protein; n=1; ...   207   2e-52
UniRef50_Q5MGF8 Cluster: Putative uncharacterized protein; n=1; ...    49   9e-05
UniRef50_Q0J0T7 Cluster: Os09g0484200 protein; n=3; Magnoliophyt...    34   2.6  
UniRef50_Q23915 Cluster: Protein kinase; n=2; Dictyostelium disc...    34   3.5  
UniRef50_Q4S5Q5 Cluster: Chromosome 9 SCAF14729, whole genome sh...    33   4.6  

>UniRef50_A0FDQ8 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 272

 Score =  207 bits (505), Expect = 2e-52
 Identities = 113/147 (76%), Positives = 113/147 (76%)
 Frame = -3

Query: 441 MKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEVAPKIDDSXXXXXXXXXXXXXXXXXXX 262
           MKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEVAPKIDDS                   
Sbjct: 1   MKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAAATEEKKAEPAP 60

Query: 261 VSNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXEAKSSEIPDAEAKSADIKVE 82
           VSNDEVPAIPEAKKDDIAPEDSDIA               EAKSSEIPDAEAKSADIKVE
Sbjct: 61  VSNDEVPAIPEAKKDDIAPEDSDIAKPETVPEVKTEEKVPEAKSSEIPDAEAKSADIKVE 120

Query: 81  EPAAQPEDSKTEVQATVAEISKEEKPS 1
           EPAAQPEDSKTEVQATVAEISKEEKPS
Sbjct: 121 EPAAQPEDSKTEVQATVAEISKEEKPS 147


>UniRef50_Q5MGF8 Cluster: Putative uncharacterized protein; n=1;
           Lonomia obliqua|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 206

 Score = 49.2 bits (112), Expect = 9e-05
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = -3

Query: 444 KMKVLLLCIAFAAVSLAMPVAEEKDVVPAQPI 349
           +MKVLLLC+AFAAVS+AMPVAEEK  V   P+
Sbjct: 18  RMKVLLLCMAFAAVSMAMPVAEEKPEVAEVPV 49


>UniRef50_Q0J0T7 Cluster: Os09g0484200 protein; n=3;
           Magnoliophyta|Rep: Os09g0484200 protein - Oryza sativa
           subsp. japonica (Rice)
          Length = 150

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
 Frame = -3

Query: 252 DEVPAIP-EAKKDDIAPEDSDIAXXXXXXXXXXXXXXXEAKSSEIPDAEAKSADIKVE-- 82
           +E PA P EA  ++ AP ++++A               E K +E   AE ++   K E  
Sbjct: 35  EETPAAPAEAVAEEAAPAEAEVAETKEAEPAAAEPAAEEVKEAEPEPAEPEAEPAKEEVA 94

Query: 81  -EPAA--QPEDSKTEVQATVAEISKEEK 7
            EPAA  + E  + E  A VAE  KEE+
Sbjct: 95  PEPAAAAEAEAKEAEPAAQVAEEVKEEE 122


>UniRef50_Q23915 Cluster: Protein kinase; n=2; Dictyostelium
            discoideum|Rep: Protein kinase - Dictyostelium discoideum
            (Slime mold)
          Length = 1094

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 25/82 (30%), Positives = 31/82 (37%)
 Frame = -3

Query: 249  EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXEAKSSEIPDAEAKSADIKVEEPAA 70
            E P   E   ++I PE+                   E K+ E   AE    D+KVEEP  
Sbjct: 858  EEPTKVEEPVEEIKPEEPTKVEESVEDVKVEDVKVEEVKAEEPTKAEESVEDVKVEEPIK 917

Query: 69   QPEDSKTEVQATVAEISKEEKP 4
              E  K E    V E  K E+P
Sbjct: 918  VEEPVKVEEPVKVEEPVKVEEP 939


>UniRef50_Q4S5Q5 Cluster: Chromosome 9 SCAF14729, whole genome
           shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 9
           SCAF14729, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 531

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 28/131 (21%), Positives = 44/131 (33%)
 Frame = -3

Query: 396 AMPVAEEKDVVPAQPILEVAPKIDDSXXXXXXXXXXXXXXXXXXXVSNDEVPAIPEAKKD 217
           A PV  E    P +P  E AP   +                       +E PA+P   ++
Sbjct: 322 APPVKIETQAPPFEPQNEAAPAETEDQFPPAETDKQALSAEEDAAAGTEEEPALPAELEE 381

Query: 216 DIAPEDSDIAXXXXXXXXXXXXXXXEAKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQA 37
           + A  D                    A+  ++   E + A+   EE   +PE  +  +Q 
Sbjct: 382 EAAAHDE---AQQEVTGNVASAEDTPAEKEDVDSLETEEAENTAEEVPKEPEVQQESIQE 438

Query: 36  TVAEISKEEKP 4
              EI  EE+P
Sbjct: 439 QKDEILGEEEP 449


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,931,276
Number of Sequences: 1657284
Number of extensions: 8770155
Number of successful extensions: 23726
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23633
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)