Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0198
(316 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 43 3e-06
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 41 1e-05
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 38 7e-05
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 38 7e-05
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 38 9e-05
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 38 1e-04
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 33 0.003
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 29 0.054
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 28 0.072
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 27 0.22
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 26 0.38
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 23 2.7
AY146747-1|AAO12062.1| 288|Anopheles gambiae odorant-binding pr... 22 4.7
AJ618931-1|CAF02009.1| 288|Anopheles gambiae odorant-binding pr... 22 4.7
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 22 6.2
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 21 8.2
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 42.7 bits (96), Expect = 3e-06
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +1
Query: 121 VILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIA 300
V+ AGDLN H W S T G + LVD L +++ T + N RP ++D+A
Sbjct: 116 VVFAGDLNAWHTAWGSCRTNAKGEAVVQLVDSLGLEVLNTGTAPTFLGNGVARPSVVDVA 175
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 40.7 bits (91), Expect = 1e-05
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Frame = +1
Query: 37 IVIASVYLPPDKIVLSSD--IEALLGMGSS---VILAGDLNCKHIRWNSHTTTPNGRRLD 201
+V S Y PP + + +EA+ G S V++AGD N +H W S T G L
Sbjct: 96 VVFISCYAPPSLNLAEFERFLEAIELEGFSHPQVVVAGDFNARHEEWGSPRTCDRGEELH 155
Query: 202 ALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIA 300
+V+ L ++ + N P I+D+A
Sbjct: 156 GMVEQLGLIVINQGREYTFVGNGVALPSIVDVA 188
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 38.3 bits (85), Expect = 7e-05
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +1
Query: 91 IEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNI 270
I+ L+ V+LAGD N H W S T P G L LV+ L +++ T +
Sbjct: 106 IDILIRGHPRVLLAGDFNAWHTAWGSERTKPKGIALLQLVNGLGLEVLNIGTSHTFRGCG 165
Query: 271 AHRPDILDIA 300
+ RP +D+A
Sbjct: 166 SARPSRIDVA 175
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 38.3 bits (85), Expect = 7e-05
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +1
Query: 64 PDKIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDL 219
P+ + I+ ++ S V+LAGD N H+ W S T P G L L D+L
Sbjct: 98 PEFRSIMEKIDLIVRGCSRVLLAGDFNAMHLDWGSSRTCPKGLELLQLADNL 149
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 37.9 bits (84), Expect = 9e-05
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Frame = +1
Query: 31 APIVIASVYLPP-------DKIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNG 189
A I SVY PP ++++ + ++EA S V++AGD N H W S G
Sbjct: 83 AGIDFISVYAPPSLSPQEYERLLEAVELEA--SSHSHVVIAGDFNAWHTEWGSRRNNLRG 140
Query: 190 RRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDI 297
L +V+ L I+ + + A RP ++D+
Sbjct: 141 EELLQMVEVLGLSILNNGSAPTFIGRGAARPSVIDV 176
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 37.5 bits (83), Expect = 1e-04
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 115 SSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILD 294
S V++AGD N H+ W S + G L + + L ++ T + + N A I+D
Sbjct: 117 SQVVIAGDFNAWHVEWGSERNSEKGEELLSAIQQLDLVVLNQGTTSTFDGNGAATASIVD 176
Query: 295 IA 300
+A
Sbjct: 177 VA 178
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 33.1 bits (72), Expect = 0.003
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Frame = +1
Query: 31 APIVIASVYLPPDKIVLSSDIEALLGM-------GSSVILAGDLNCKHIRWNSHTTTPNG 189
A I SVY PP + + + E LLG S V++AGD N H W S G
Sbjct: 146 AGITFISVYAPPS--LSAHEFERLLGAIELEAASHSRVVVAGDFNAWHEEWGSGRNGQRG 203
Query: 190 RRLDALVDDLAFDIV 234
L V+ L I+
Sbjct: 204 IELLQTVETLGLSIL 218
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 28.7 bits (61), Expect = 0.054
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +1
Query: 115 SSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIV 234
S V++ GD N H W S + G L L+ + ++
Sbjct: 136 SQVVIDGDFNAWHTEWGSARNSQRGEDLLQLIQSVQLQVI 175
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 28.3 bits (60), Expect = 0.072
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +1
Query: 91 IEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIV 234
+E + +V+L GD N H W S T G L V+ L ++
Sbjct: 106 VEIEVSAHPNVVLGGDFNAWHEAWGSARTKRKGEELLNTVEQLGLIVL 153
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 26.6 bits (56), Expect = 0.22
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
Frame = +1
Query: 37 IVIASVYLPP----DKI-VLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLD 201
+ S Y PP ++ V+ ++ A L +++AGD N + W S T G D
Sbjct: 80 VFFCSCYAPPSWELERFHVMLDNLVAELDGHRPLVIAGDFNAWAVEWGSKRTNSRG---D 136
Query: 202 ALVDDLA-FDIVAPLTPTHYPLNIAHRPDILDI 297
A+++ A + T N R I+DI
Sbjct: 137 AVLESFARLGVTLGNAGTTPTFNRNKRTSIVDI 169
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 25.8 bits (54), Expect = 0.38
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +1
Query: 37 IVIASVYLPPD--KIVLSSDIEALLGMGSS---VILAGDLNCKHIRWNSHTTTPNGRRL 198
I S Y PP + + +EA+ S V++AGD N H W S + G L
Sbjct: 142 ITFLSCYAPPSLSREGFAEFVEAIELEAQSHPQVVVAGDFNAWHEEWGSRRSNERGEVL 200
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 23.0 bits (47), Expect = 2.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +1
Query: 121 VILAGDLNCKHIRWNSHTTTPNG 189
+I++GD N W S +T G
Sbjct: 115 IIISGDFNAWATEWGSKSTNARG 137
>AY146747-1|AAO12062.1| 288|Anopheles gambiae odorant-binding
protein AgamOBP42 protein.
Length = 288
Score = 22.2 bits (45), Expect = 4.7
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 91 YHCLERSYPVED 56
Y C+ER PV+D
Sbjct: 108 YRCIERKAPVDD 119
>AJ618931-1|CAF02009.1| 288|Anopheles gambiae odorant-binding
protein OBPjj83d protein.
Length = 288
Score = 22.2 bits (45), Expect = 4.7
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 91 YHCLERSYPVED 56
Y C+ER PV+D
Sbjct: 108 YRCIERKAPVDD 119
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
FGF-signaling promoter protein.
Length = 1197
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 23 RDTRRSLSRPFIFHRIRSF 79
R+ + L RP F R+RSF
Sbjct: 915 RELKDKLKRPTPFERMRSF 933
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 121 VILAGDLNC 147
VILAGD NC
Sbjct: 141 VILAGDFNC 149
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 330,866
Number of Sequences: 2352
Number of extensions: 6149
Number of successful extensions: 22
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 20748816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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