Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0196
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    25   0.54 
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    24   0.94 
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    24   0.94 
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    24   0.94 
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   6.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   6.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.8  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +1

Query: 520 FQSETSQTLRWPNTEQGD*CVHGERADGAADQRSVRAEGARL 645
           F  E + TL W N +Q      G +  G  D+RS++ + A L
Sbjct: 805 FLHEDNTTLVWDNEQQVPFAYRGNQWVGFDDERSLKTKMAWL 846


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +2

Query: 239 MLTELEKLPGVQL--GDFLLQFELDEPRESVREIARREL 349
           +LTELEK P V++     L+    ++ R SV  +   E+
Sbjct: 117 LLTELEKYPNVKIYFNHKLMSVSFEDERISVMNLITEEI 155


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +2

Query: 239 MLTELEKLPGVQL--GDFLLQFELDEPRESVREIARREL 349
           +LTELEK P V++     L+    ++ R SV  +   E+
Sbjct: 117 LLTELEKYPNVKIYFNHKLMSVSFEDERISVMNLITEEI 155


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +2

Query: 239 MLTELEKLPGVQL--GDFLLQFELDEPRESVREIARREL 349
           +LTELEK P V++     L+    ++ R SV  +   E+
Sbjct: 117 LLTELEKYPNVKIYFNHKLMSVSFEDERISVMNLITEEI 155


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 479 YPESAYDLIKRYYGFKVKHHKHY 547
           YP   Y+LI R Y   V +   Y
Sbjct: 252 YPAPLYELIDRKYDENVDYQVRY 274


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = +1

Query: 85  TDNKIINNILAKQ 123
           +DN+I+NN+L K+
Sbjct: 407 SDNRILNNLLDKK 419


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = +1

Query: 85  TDNKIINNILAKQ 123
           +DN+I+NN+L K+
Sbjct: 299 SDNRILNNLLDKK 311


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 36  FTTHRRKHDIKVIVRDN 86
           F++ RR+H I ++  DN
Sbjct: 230 FSSPRRRHSINLLEEDN 246


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = -3

Query: 176  LC-VAHELKKMRKSFNE 129
            LC + H L K+ KSFNE
Sbjct: 1304 LCSLHHHLSKLIKSFNE 1320


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 120 TDYFIKTFTHFF*F 161
           T YF+ T+ H F F
Sbjct: 347 TTYFLNTYPHLFNF 360


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,989
Number of Sequences: 336
Number of extensions: 2504
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)