Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0194
         (424 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   3.7  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    20   8.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    20   8.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    20   8.6  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    20   8.6  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    20   8.6  

>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 286 FYILLDAVDDMHVLDLHH 233
           + I  D +  +H+ DLHH
Sbjct: 79  YLIPKDTITIIHIYDLHH 96


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -1

Query: 268 AVDDMHVLDLHH 233
           ++ ++H+ DLHH
Sbjct: 401 SIVNLHIYDLHH 412


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 10/41 (24%), Positives = 17/41 (41%)
 Frame = +2

Query: 185 EKNGKCSSXEYKLEGDVVKVKNVHIIDGVKKYIEWTAKLTD 307
           +K  + S   YKL    VK+  +  I  +   + W   + D
Sbjct: 255 QKIQELSHLHYKLANFTVKISGLFEITTITAMVMWFGYVID 295


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 10/41 (24%), Positives = 17/41 (41%)
 Frame = +2

Query: 185 EKNGKCSSXEYKLEGDVVKVKNVHIIDGVKKYIEWTAKLTD 307
           +K  + S   YKL    VK+  +  I  +   + W   + D
Sbjct: 211 QKIQELSHLHYKLANFTVKISGLFEITTITAMVMWFGYVID 251


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 161 ISKFPNESEKNGKCSSXEYK 220
           +SK P+E EK  +    EY+
Sbjct: 265 VSKPPHEVEKRAQDGQYEYR 284


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -1

Query: 268 AVDDMHVLDLHH 233
           ++ ++H+ DLHH
Sbjct: 401 SIVNLHIYDLHH 412


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,628
Number of Sequences: 336
Number of extensions: 1351
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9384961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)