Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0193
(745 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S57212-1|AAB25838.1| 465|Homo sapiens myocyte enhancer-binding ... 35 0.35
L08895-1|AAA59578.1| 473|Homo sapiens enhancer binding factor 2... 35 0.35
M93221-1|AAA60389.1| 1456|Homo sapiens mannose receptor protein. 34 0.47
J05550-1|AAA59868.1| 1456|Homo sapiens M6PR protein. 34 0.47
DQ663787-1|ABG47462.1| 1456|Homo sapiens mannose receptor protein. 34 0.47
BX255924-1|CAI15339.1| 1456|Homo sapiens mannose receptor, C typ... 34 0.47
AL928729-2|CAH70733.1| 1456|Homo sapiens mannose receptor, C typ... 34 0.47
AL928580-1|CAH71176.1| 1456|Homo sapiens mannose receptor, C typ... 34 0.47
AL139238-2|CAH70872.1| 1456|Homo sapiens mannose receptor, C typ... 34 0.47
AJ973593-1|CAJ00537.1| 170|Homo sapiens polyglutamine binding p... 33 0.82
AB041836-1|BAB16709.1| 170|Homo sapiens PQBP-1d protein. 33 0.82
AB041832-2|BAB16703.1| 170|Homo sapiens PQBP1-1d protein. 33 0.82
U17033-1|AAA70110.1| 1465|Homo sapiens 180 kDa transmembrane PLA... 31 4.4
BC142642-1|AAI42643.1| 498|Homo sapiens MRC1L1 protein protein. 31 4.4
AC093873-2|AAY24190.1| 495|Homo sapiens unknown protein. 31 4.4
AF319572-1|AAK07619.1| 279|Homo sapiens 3'-5' exonuclease TREX2... 31 5.8
AF319571-1|AAK07618.1| 279|Homo sapiens 3'-5' exonuclease TREX2... 31 5.8
BC139723-1|AAI39724.1| 567|Homo sapiens CLEC4F protein protein. 30 7.6
>S57212-1|AAB25838.1| 465|Homo sapiens myocyte enhancer-binding
factor 2 protein.
Length = 465
Score = 34.7 bits (76), Expect = 0.35
Identities = 24/71 (33%), Positives = 31/71 (43%)
Frame = +1
Query: 511 LHNAPPDMVGIPGRNTS*LMAASRSKLRPSTGSLNTXXXXXXXXXXXXXXITTTTARFPF 690
LHN PP + G TS ++ S + PST SLN TTT +R+P
Sbjct: 347 LHNMPPSALSQLGACTSTHLSQSSNLSLPSTQSLNIKSEPVSPPRDR----TTTPSRYPQ 402
Query: 691 HPRRGNARKPL 723
H R R P+
Sbjct: 403 HTRHEAGRSPV 413
>L08895-1|AAA59578.1| 473|Homo sapiens enhancer binding factor 2C
protein.
Length = 473
Score = 34.7 bits (76), Expect = 0.35
Identities = 24/71 (33%), Positives = 31/71 (43%)
Frame = +1
Query: 511 LHNAPPDMVGIPGRNTS*LMAASRSKLRPSTGSLNTXXXXXXXXXXXXXXITTTTARFPF 690
LHN PP + G TS ++ S + PST SLN TTT +R+P
Sbjct: 355 LHNMPPSALSQLGACTSTHLSQSSNLSLPSTQSLNIKSEPVSPPRDR----TTTPSRYPQ 410
Query: 691 HPRRGNARKPL 723
H R R P+
Sbjct: 411 HTRHEAGRSPV 421
>M93221-1|AAA60389.1| 1456|Homo sapiens mannose receptor protein.
Length = 1456
Score = 34.3 bits (75), Expect = 0.47
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +3
Query: 225 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 395
+F S +CR+LG LAS KE+ +I +T +G Y+K FW G G ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729
Query: 396 TGLP 407
G P
Sbjct: 730 DGSP 733
Score = 31.9 bits (69), Expect = 2.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 567 NGCIALKAPTFHWEPQHCGEIKDFICEQTR 656
N C+AL A + W HC K +IC++ +
Sbjct: 1330 NDCVALHASSGFWSNIHCSSYKGYICKRPK 1359
>J05550-1|AAA59868.1| 1456|Homo sapiens M6PR protein.
Length = 1456
Score = 34.3 bits (75), Expect = 0.47
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +3
Query: 225 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 395
+F S +CR+LG LAS KE+ +I +T +G Y+K FW G G ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729
Query: 396 TGLP 407
G P
Sbjct: 730 DGSP 733
Score = 31.9 bits (69), Expect = 2.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 567 NGCIALKAPTFHWEPQHCGEIKDFICEQTR 656
N C+AL A + W HC K +IC++ +
Sbjct: 1330 NDCVALHASSGFWSNIHCSSYKGYICKRPK 1359
>DQ663787-1|ABG47462.1| 1456|Homo sapiens mannose receptor protein.
Length = 1456
Score = 34.3 bits (75), Expect = 0.47
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +3
Query: 225 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 395
+F S +CR+LG LAS KE+ +I +T +G Y+K FW G G ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729
Query: 396 TGLP 407
G P
Sbjct: 730 DGSP 733
Score = 31.9 bits (69), Expect = 2.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 567 NGCIALKAPTFHWEPQHCGEIKDFICEQTR 656
N C+AL A + W HC K +IC++ +
Sbjct: 1330 NDCVALHASSGFWSNIHCSSYKGYICKRPK 1359
Score = 30.3 bits (65), Expect = 7.6
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 246 CRSLGLQLASFETKEKADSITTYLTNAGYNKYD-FWTSGNNLGTDMFLWMSTGLPFNAT 419
CR G LAS T E+ D I + L GY D W N++ M+ S G P T
Sbjct: 391 CRKEGGDLASIHTIEEFDFIISQL---GYEPNDELWIGLNDIKIQMYFEWSDGTPVTFT 446
>BX255924-1|CAI15339.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 34.3 bits (75), Expect = 0.47
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +3
Query: 225 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 395
+F S +CR+LG LAS KE+ +I +T +G Y+K FW G G ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729
Query: 396 TGLP 407
G P
Sbjct: 730 DGSP 733
Score = 31.9 bits (69), Expect = 2.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 567 NGCIALKAPTFHWEPQHCGEIKDFICEQTR 656
N C+AL A + W HC K +IC++ +
Sbjct: 1330 NDCVALHASSGFWSNIHCSSYKGYICKRPK 1359
Score = 31.1 bits (67), Expect = 4.4
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 246 CRSLGLQLASFETKEKADSITTYLTNAGYNKYD-FWTSGNNLGTDMFLWMSTGLPFNAT 419
CR G LAS T E+ D I + L GY D W N++ M+ S G P T
Sbjct: 391 CRKEGSDLASIHTIEEFDFIISQL---GYEPNDELWIGLNDIKIQMYFEWSDGTPVTFT 446
>AL928729-2|CAH70733.1| 1456|Homo sapiens mannose receptor, C type 1
protein.
Length = 1456
Score = 34.3 bits (75), Expect = 0.47
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +3
Query: 225 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 395
+F S +CR+LG LAS KE+ +I +T +G Y+K FW G G ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729
Query: 396 TGLP 407
G P
Sbjct: 730 DGSP 733
Score = 31.9 bits (69), Expect = 2.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 567 NGCIALKAPTFHWEPQHCGEIKDFICEQTR 656
N C+AL A + W HC K +IC++ +
Sbjct: 1330 NDCVALHASSGFWSNIHCSSYKGYICKRPK 1359
>AL928580-1|CAH71176.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 34.3 bits (75), Expect = 0.47
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +3
Query: 225 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 395
+F S +CR+LG LAS KE+ +I +T +G Y+K FW G G ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729
Query: 396 TGLP 407
G P
Sbjct: 730 DGSP 733
Score = 31.9 bits (69), Expect = 2.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 567 NGCIALKAPTFHWEPQHCGEIKDFICEQTR 656
N C+AL A + W HC K +IC++ +
Sbjct: 1330 NDCVALHASSGFWSNIHCSSYKGYICKRPK 1359
Score = 31.1 bits (67), Expect = 4.4
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 246 CRSLGLQLASFETKEKADSITTYLTNAGYNKYD-FWTSGNNLGTDMFLWMSTGLPFNAT 419
CR G LAS T E+ D I + L GY D W N++ M+ S G P T
Sbjct: 391 CRKEGSDLASIHTIEEFDFIISQL---GYEPNDELWIGLNDIKIQMYFEWSDGTPVTFT 446
>AL139238-2|CAH70872.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 34.3 bits (75), Expect = 0.47
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +3
Query: 225 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 395
+F S +CR+LG LAS KE+ +I +T +G Y+K FW G G ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729
Query: 396 TGLP 407
G P
Sbjct: 730 DGSP 733
Score = 31.9 bits (69), Expect = 2.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 567 NGCIALKAPTFHWEPQHCGEIKDFICEQTR 656
N C+AL A + W HC K +IC++ +
Sbjct: 1330 NDCVALHASSGFWSNIHCSSYKGYICKRPK 1359
Score = 31.1 bits (67), Expect = 4.4
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 246 CRSLGLQLASFETKEKADSITTYLTNAGYNKYD-FWTSGNNLGTDMFLWMSTGLPFNAT 419
CR G LAS T E+ D I + L GY D W N++ M+ S G P T
Sbjct: 391 CRKEGSDLASIHTIEEFDFIISQL---GYEPNDELWIGLNDIKIQMYFEWSDGTPVTFT 446
>AJ973593-1|CAJ00537.1| 170|Homo sapiens polyglutamine binding
protein variant 1 protein.
Length = 170
Score = 33.5 bits (73), Expect = 0.82
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Frame = +3
Query: 363 NLGTDMFLWMSTGLPFNATFNYMRRL-PIDAPAQHADDSMDPLDVPQGSTAPQRTARHGR 539
N TD+ W+S P + ++L +A D+ +DP+D S AP+ T G
Sbjct: 67 NADTDLVSWLSPHDPNSVVTKSAKKLRSSNAAVSRKDEELDPMDPSSYSDAPRGTWSTGL 126
Query: 540 YSRTEHVMTNGCIALKAPTFHWEP 611
R E T P F P
Sbjct: 127 PKRNE-AKTGADTTAAGPLFQQRP 149
>AB041836-1|BAB16709.1| 170|Homo sapiens PQBP-1d protein.
Length = 170
Score = 33.5 bits (73), Expect = 0.82
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Frame = +3
Query: 363 NLGTDMFLWMSTGLPFNATFNYMRRL-PIDAPAQHADDSMDPLDVPQGSTAPQRTARHGR 539
N TD+ W+S P + ++L +A D+ +DP+D S AP+ T G
Sbjct: 67 NADTDLVSWLSPHDPNSVVTKSAKKLRSSNAAVSRKDEELDPMDPSSYSDAPRGTWSTGL 126
Query: 540 YSRTEHVMTNGCIALKAPTFHWEP 611
R E T P F P
Sbjct: 127 PKRNE-AKTGADTTAAGPLFQQRP 149
>AB041832-2|BAB16703.1| 170|Homo sapiens PQBP1-1d protein.
Length = 170
Score = 33.5 bits (73), Expect = 0.82
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Frame = +3
Query: 363 NLGTDMFLWMSTGLPFNATFNYMRRL-PIDAPAQHADDSMDPLDVPQGSTAPQRTARHGR 539
N TD+ W+S P + ++L +A D+ +DP+D S AP+ T G
Sbjct: 67 NADTDLVSWLSPHDPNSVVTKSAKKLRSSNAAVSRKDEELDPMDPSSYSDAPRGTWSTGL 126
Query: 540 YSRTEHVMTNGCIALKAPTFHWEP 611
R E T P F P
Sbjct: 127 PKRNE-AKTGADTTAAGPLFQQRP 149
>U17033-1|AAA70110.1| 1465|Homo sapiens 180 kDa transmembrane PLA2
receptor precursor protein.
Length = 1465
Score = 31.1 bits (67), Expect = 4.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 549 TEHVMTNGCIALKAPTFHWEPQHCGEIKDFICE 647
T++ + C+AL+ P W+ C E K FIC+
Sbjct: 1348 TDYFKPHHCVALRIPEGLWQLSPCQEKKGFICK 1380
>BC142642-1|AAI42643.1| 498|Homo sapiens MRC1L1 protein protein.
Length = 498
Score = 31.1 bits (67), Expect = 4.4
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 246 CRSLGLQLASFETKEKADSITTYLTNAGYNKYD-FWTSGNNLGTDMFLWMSTGLPFNAT 419
CR G LAS T E+ D I + L GY D W N++ M+ S G P T
Sbjct: 391 CRKEGSDLASIHTIEEFDFIISQL---GYEPNDELWIGLNDIKIQMYFEWSDGTPVTFT 446
>AC093873-2|AAY24190.1| 495|Homo sapiens unknown protein.
Length = 495
Score = 31.1 bits (67), Expect = 4.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 549 TEHVMTNGCIALKAPTFHWEPQHCGEIKDFICE 647
T++ + C+AL+ P W+ C E K FIC+
Sbjct: 378 TDYFKPHHCVALRIPEGLWQLSPCQEKKGFICK 410
>AF319572-1|AAK07619.1| 279|Homo sapiens 3'-5' exonuclease
TREX2-like protein protein.
Length = 279
Score = 30.7 bits (66), Expect = 5.8
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -2
Query: 429 CS*KSR*MADRCSSTKTCLCRGYYPMSRSHICYSLHLLDKSLSNLPS 289
C +SR CSS +TC RG MS + + LD + LPS
Sbjct: 19 CGSRSRCSPTLCSSLRTCYPRGNITMSEAPRAETFVFLDLEATGLPS 65
>AF319571-1|AAK07618.1| 279|Homo sapiens 3'-5' exonuclease
TREX2-like protein protein.
Length = 279
Score = 30.7 bits (66), Expect = 5.8
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -2
Query: 429 CS*KSR*MADRCSSTKTCLCRGYYPMSRSHICYSLHLLDKSLSNLPS 289
C +SR CSS +TC RG MS + + LD + LPS
Sbjct: 19 CGSRSRCSPTLCSSLRTCYPRGNITMSEAPRAETFVFLDLEATGLPS 65
>BC139723-1|AAI39724.1| 567|Homo sapiens CLEC4F protein protein.
Length = 567
Score = 30.3 bits (65), Expect = 7.6
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 240 QYCRSLGLQLASFETKEKADSITTYLTNAGYNKYDFWTSGNNLGTDMFLWMSTGLPFNAT 419
Q+C S G LAS +KE+ + + +K +W + GT+ + G PFNA
Sbjct: 495 QFCVSQGAHLASVASKEEQAFLVEFT-----SKVYYWIGLTDRGTEGSWRWTDGTPFNAA 549
Query: 420 FN 425
N
Sbjct: 550 QN 551
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,140,216
Number of Sequences: 237096
Number of extensions: 2555281
Number of successful extensions: 10283
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 9778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10279
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -