Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0186
         (721 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   5.4  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    24   5.4  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    23   7.2  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   9.5  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   9.5  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +2

Query: 314 KHVR--RIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 445
           KHV+  +   +LK  +VC+     +  +RVV  GI  SGL L +GP
Sbjct: 109 KHVKFCQFAFDLKCDSVCV---NPYHYERVVSPGIDLSGLTLQSGP 151


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +1

Query: 622 CHKKREIRSI*AAQNRSEDSRRCWDQSHRS 711
           C ++  I +    ++RS+   RC DQ+H++
Sbjct: 469 CLERGHIAATCTGEDRSKRCLRCGDQTHKA 498


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +1

Query: 403 CWNSAQRSAFSYWTFCIQF-VPAT 471
           CW+ A++   + W+F I F +P T
Sbjct: 337 CWSRARKLVAAAWSFSILFSLPIT 360


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = -3

Query: 527  SCRVKFWWRCRSHSAEECG 471
            +C+  FW   R H    CG
Sbjct: 1813 TCQTVFWIGLRKHHCRSCG 1831


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = -3

Query: 527  SCRVKFWWRCRSHSAEECG 471
            +C+  FW   R H    CG
Sbjct: 1814 TCQTVFWIGLRKHHCRSCG 1832


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 770,302
Number of Sequences: 2352
Number of extensions: 15967
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)