Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0185
(678 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4STW6 Cluster: Chromosome undetermined SCAF14091, whol... 37 0.52
UniRef50_Q8IQT9 Cluster: CG32204-PA; n=4; Endopterygota|Rep: CG3... 36 0.69
UniRef50_UPI000155CBF0 Cluster: PREDICTED: hypothetical protein;... 36 1.2
UniRef50_Q9H8S7 Cluster: CDNA FLJ13262 fis, clone OVARC1000912; ... 36 1.2
UniRef50_Q8IES1 Cluster: Putative uncharacterized protein PF13_0... 34 2.8
UniRef50_UPI0000DD7D37 Cluster: PREDICTED: hypothetical protein;... 33 4.8
UniRef50_Q62B01 Cluster: Type III secretion system protein BsaV;... 33 4.8
UniRef50_Q3W0B6 Cluster: Peptidoglycan-binding LysM; n=1; Franki... 33 4.8
UniRef50_Q4QJD3 Cluster: Putative uncharacterized protein; n=2; ... 33 6.4
UniRef50_Q22U31 Cluster: Transporter, cation channel family prot... 33 6.4
UniRef50_UPI0000DD78AE Cluster: PREDICTED: hypothetical protein;... 33 8.4
>UniRef50_Q4STW6 Cluster: Chromosome undetermined SCAF14091, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF14091, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 674
Score = 36.7 bits (81), Expect = 0.52
Identities = 26/73 (35%), Positives = 28/73 (38%)
Frame = -1
Query: 318 KARTRNVIVHVSLRLCRFQRRPGVGRSHRAGSGESPAPRGGAAVVTALLAPHPSR*RRLA 139
+ARTR V SL + R G G R G G PR G A A A R
Sbjct: 552 EARTRRVSARPSLNVPREAAEAGRGGRDRTGQGRGEGPRSGTARTAARRAAARRPRRATP 611
Query: 138 ASGKAAGHTRCKG 100
G AAG T G
Sbjct: 612 RPGAAAGPTGSTG 624
>UniRef50_Q8IQT9 Cluster: CG32204-PA; n=4; Endopterygota|Rep:
CG32204-PA - Drosophila melanogaster (Fruit fly)
Length = 474
Score = 36.3 bits (80), Expect = 0.69
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 90 FLNCLCIWCVLRLYHLLRAGVTWKG 164
F L +W VLR Y+L+R+G+TW+G
Sbjct: 160 FEQVLAMWGVLRFYNLVRSGITWRG 184
>UniRef50_UPI000155CBF0 Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 315
Score = 35.5 bits (78), Expect = 1.2
Identities = 19/41 (46%), Positives = 21/41 (51%)
Frame = -1
Query: 255 PGVGRSHRAGSGESPAPRGGAAVVTALLAPHPSR*RRLAAS 133
PG R +G P PRGG A +A L P RRLAAS
Sbjct: 110 PGTPRPRTPPAGLEPYPRGGPATESAALPAFPGTPRRLAAS 150
>UniRef50_Q9H8S7 Cluster: CDNA FLJ13262 fis, clone OVARC1000912;
n=2; Homo sapiens|Rep: CDNA FLJ13262 fis, clone
OVARC1000912 - Homo sapiens (Human)
Length = 190
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -1
Query: 246 GRSHRAGSGESPAPRGGAAVVTALLAPHPSR*RRLAASGKAAG 118
GR H G G PAPR + + A AP P+R RR A G
Sbjct: 80 GRRHHGGGGSRPAPRRKSPLPAAARAPSPARPRRPHACRDGGG 122
>UniRef50_Q8IES1 Cluster: Putative uncharacterized protein
PF13_0020; n=2; Plasmodium|Rep: Putative uncharacterized
protein PF13_0020 - Plasmodium falciparum (isolate 3D7)
Length = 613
Score = 34.3 bits (75), Expect = 2.8
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 660 NKKNHETAFGHSLKTKTVKSSNF-RDNIMITENXRLNSKTSFNSKIIETNR 511
NK+ H+ +K + N RDNI + EN N K FN II+ N+
Sbjct: 169 NKRTSSHYTDHNKSSKLINDMNVSRDNIGVYENTNKNKKEGFNYSIIKYNK 219
>UniRef50_UPI0000DD7D37 Cluster: PREDICTED: hypothetical protein;
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: hypothetical
protein - Homo sapiens
Length = 208
Score = 33.5 bits (73), Expect = 4.8
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = -1
Query: 252 GVGRSHRAGSGESPAPRGGAAVVTALLAPHPSR*RRLAASGKA 124
G GR+ RAG G AP AA +TALLA H +R ASG+A
Sbjct: 102 GAGRAARAGGGRR-APGPSAAALTALLALHEAR-----ASGRA 138
>UniRef50_Q62B01 Cluster: Type III secretion system protein BsaV;
n=17; Burkholderia|Rep: Type III secretion system
protein BsaV - Burkholderia mallei (Pseudomonas mallei)
Length = 327
Score = 33.5 bits (73), Expect = 4.8
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +2
Query: 113 VCPAALPLAASRRHLEGCGANRAVTTAAPPRG 208
V PA LPL R L G + A+ T APPRG
Sbjct: 11 VAPAELPLYRRARALRAAGEHAALRTIAPPRG 42
>UniRef50_Q3W0B6 Cluster: Peptidoglycan-binding LysM; n=1; Frankia
sp. EAN1pec|Rep: Peptidoglycan-binding LysM - Frankia
sp. EAN1pec
Length = 229
Score = 33.5 bits (73), Expect = 4.8
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +1
Query: 184 DYCRPSPRSRTLAAPSPVRPPYSWAALKATQTQAYM----NYDVSCTCFSVTG 330
++ P+ RSR +PSP ++W K QT ++ + D +CT F+ TG
Sbjct: 89 NWTNPTERSRRGTSPSPPVLMFNWGDFKVGQTGQFVGLLTSVDATCTLFTPTG 141
>UniRef50_Q4QJD3 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 2687
Score = 33.1 bits (72), Expect = 6.4
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = -1
Query: 267 FQRRPGVGRSHRAGSGESPAPRGGAAVVTALLAPHPSR*RRLAASGKAAGHTRCKGNLE 91
+ PGVG + G ESP P G V A A PS + + G A+G +GN E
Sbjct: 1819 YSNSPGVGGAAAGGVAESPGP-GAYNVEAAYRATLPSAATAILSGGGASGVNGVRGNDE 1876
>UniRef50_Q22U31 Cluster: Transporter, cation channel family protein;
n=1; Tetrahymena thermophila SB210|Rep: Transporter,
cation channel family protein - Tetrahymena thermophila
SB210
Length = 1272
Score = 33.1 bits (72), Expect = 6.4
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -1
Query: 666 KKNKKNHETAFGHSLKTKTVKSSNFRDNIMITENXRLNSKTSFNSKIIETNRQKFRQ*FI 487
+ N +N E TK ++S+ +DN +N +K SF I R+KF + F+
Sbjct: 966 QSNSQNREEQKTQQESTKNNQNSSNKDNSKQNKNQNKQNKDSFLENIYARRRRKFTK-FV 1024
Query: 486 TFSNQI 469
NQ+
Sbjct: 1025 ELQNQL 1030
>UniRef50_UPI0000DD78AE Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 305
Score = 32.7 bits (71), Expect = 8.4
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -1
Query: 321 RKARTRNVIVHVSLRLCRFQRRP-GVGRSHRAGSGESPAPRGGAAVVTALLAPHP-SR*R 148
R AR+ ++ + +SL L R G GRS RAGS P P G + + L A +R R
Sbjct: 204 RGARSPSLFLSLSLSLLGCPARGRGRGRSARAGSPRLPFPVPGKSSLRGLAASRSRARCR 263
Query: 147 RLAASGKAAG 118
A G AAG
Sbjct: 264 SALAWGSAAG 273
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,347,721
Number of Sequences: 1657284
Number of extensions: 12474026
Number of successful extensions: 44317
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 41642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44256
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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