Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0185
(678 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT010023-1|AAQ22492.1| 368|Drosophila melanogaster RE07278p pro... 73 4e-13
AE014296-3088|AAN11663.1| 474|Drosophila melanogaster CG32204-P... 36 0.039
U95021-1|AAB53640.1| 641|Drosophila melanogaster mirror protein. 30 2.5
AY052134-1|AAK93558.1| 704|Drosophila melanogaster SD08605p pro... 30 2.5
AF004710-1|AAC23943.1| 641|Drosophila melanogaster homeoprotein... 30 2.5
AE014296-2168|AAN11850.1| 641|Drosophila melanogaster CG10601-P... 30 2.5
AE014296-2167|AAF49894.1| 641|Drosophila melanogaster CG10601-P... 30 2.5
AE014134-536|AAF51163.1| 704|Drosophila melanogaster CG17264-PA... 30 2.5
AE014134-1970|AAF53017.1| 874|Drosophila melanogaster CG6700-PA... 30 3.3
AE014297-2424|AAF55483.5| 738|Drosophila melanogaster CG31243-P... 29 4.4
>BT010023-1|AAQ22492.1| 368|Drosophila melanogaster RE07278p
protein.
Length = 368
Score = 72.9 bits (171), Expect = 4e-13
Identities = 28/46 (60%), Positives = 38/46 (82%)
Frame = +3
Query: 27 HVNKQFDSMCKAEISFLIPRIFLNCLCIWCVLRLYHLLRAGVTWKG 164
HVNKQFD+MCKAE++F I R +N L +W VLR Y+L+R+G+TW+G
Sbjct: 127 HVNKQFDAMCKAEVAFFIARALINVLAMWGVLRFYNLVRSGITWRG 172
>AE014296-3088|AAN11663.1| 474|Drosophila melanogaster CG32204-PA
protein.
Length = 474
Score = 36.3 bits (80), Expect = 0.039
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 90 FLNCLCIWCVLRLYHLLRAGVTWKG 164
F L +W VLR Y+L+R+G+TW+G
Sbjct: 160 FEQVLAMWGVLRFYNLVRSGITWRG 184
>U95021-1|AAB53640.1| 641|Drosophila melanogaster mirror protein.
Length = 641
Score = 30.3 bits (65), Expect = 2.5
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +2
Query: 92 SKLPLHLVCPAALPLAASRRHLEGCGANRAVTTAAPPRGAGLSP 223
S LP L CPAA PL+A + G G + VT+ PP SP
Sbjct: 39 STLPT-LACPAAQPLSAP--GIAGPGHSGMVTSTVPPGARSTSP 79
>AY052134-1|AAK93558.1| 704|Drosophila melanogaster SD08605p
protein.
Length = 704
Score = 30.3 bits (65), Expect = 2.5
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Frame = -1
Query: 324 HRKARTRNVIVHVSLRLCRFQRRPGVGRSHRAGSGESPAPRGG----AAVVTALLAPHPS 157
H + + V L +C +P +S R G G A RGG AA TA +P P+
Sbjct: 386 HLANQNYRICVRQELDMCSIMYQPCDEQSFRIGGGGRMASRGGGTSEAAATTATSSPAPA 445
Query: 156 R*RRLAASGKAAGH 115
+ A+ G+
Sbjct: 446 QSDAAGATATTLGN 459
>AF004710-1|AAC23943.1| 641|Drosophila melanogaster homeoprotein
Sail protein.
Length = 641
Score = 30.3 bits (65), Expect = 2.5
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +2
Query: 92 SKLPLHLVCPAALPLAASRRHLEGCGANRAVTTAAPPRGAGLSP 223
S LP L CPAA PL+A + G G + VT+ PP SP
Sbjct: 39 STLPT-LACPAAQPLSAP--GIAGPGHSGMVTSTVPPGARSTSP 79
>AE014296-2168|AAN11850.1| 641|Drosophila melanogaster CG10601-PB,
isoform B protein.
Length = 641
Score = 30.3 bits (65), Expect = 2.5
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +2
Query: 92 SKLPLHLVCPAALPLAASRRHLEGCGANRAVTTAAPPRGAGLSP 223
S LP L CPAA PL+A + G G + VT+ PP SP
Sbjct: 39 STLPT-LACPAAQPLSAP--GIAGPGHSGMVTSTVPPGARSTSP 79
>AE014296-2167|AAF49894.1| 641|Drosophila melanogaster CG10601-PA,
isoform A protein.
Length = 641
Score = 30.3 bits (65), Expect = 2.5
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +2
Query: 92 SKLPLHLVCPAALPLAASRRHLEGCGANRAVTTAAPPRGAGLSP 223
S LP L CPAA PL+A + G G + VT+ PP SP
Sbjct: 39 STLPT-LACPAAQPLSAP--GIAGPGHSGMVTSTVPPGARSTSP 79
>AE014134-536|AAF51163.1| 704|Drosophila melanogaster CG17264-PA
protein.
Length = 704
Score = 30.3 bits (65), Expect = 2.5
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Frame = -1
Query: 324 HRKARTRNVIVHVSLRLCRFQRRPGVGRSHRAGSGESPAPRGG----AAVVTALLAPHPS 157
H + + V L +C +P +S R G G A RGG AA TA +P P+
Sbjct: 386 HLANQNYRICVRQELDMCSIMYQPCDEQSFRIGGGGRMASRGGGTSEAAATTATSSPAPA 445
Query: 156 R*RRLAASGKAAGH 115
+ A+ G+
Sbjct: 446 QSDAAGATATTLGN 459
>AE014134-1970|AAF53017.1| 874|Drosophila melanogaster CG6700-PA
protein.
Length = 874
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = -3
Query: 382 HLNVSRSTRPKSDNKQ*NLSQKSTYKKRHSSCKLASVSLSTPPRSREVSQ 233
H + S+ +R +S + + S K + KKR+S + S S S PRSR S+
Sbjct: 429 HSSSSKYSRSRSRSPSSSNSLKYSSKKRYSRSRSRSRSRSRSPRSRSCSR 478
>AE014297-2424|AAF55483.5| 738|Drosophila melanogaster CG31243-PE,
isoform E protein.
Length = 738
Score = 29.5 bits (63), Expect = 4.4
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -1
Query: 255 PGVGRSHRAGSGESPAPRGGAAVVTALLAPHPSR*RRLAASGKAAGH 115
PG +H A + + A GG TA AP + AA+ AA H
Sbjct: 626 PGAAMAHMAAAAAAAAAGGGGGAATAAAAPQSA--AATAAAAAAASH 670
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,111,707
Number of Sequences: 53049
Number of extensions: 615541
Number of successful extensions: 2410
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2405
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -