Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0184
(797 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 24 1.2
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 24 1.2
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 24 1.2
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 24 1.2
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 24 1.2
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 24 1.2
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 24 1.2
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 24 1.2
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 22 4.9
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 22 6.5
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 22 6.5
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 22 6.5
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 22 6.5
EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450 ... 21 8.6
DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory pro... 21 8.6
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.2
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +1
Query: 577 LGSRSPPSRDTARRALPTPAPLNSTLRTSPTEKTSNSLTKP*HSALTILSGLLRNPALIN 756
L + P R T L TP+ N+T + T S S + P A + S L +PA
Sbjct: 116 LSTNGAPPRSTP--PLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASST 173
Query: 757 MATGN 771
+T +
Sbjct: 174 SSTSS 178
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.2
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +1
Query: 577 LGSRSPPSRDTARRALPTPAPLNSTLRTSPTEKTSNSLTKP*HSALTILSGLLRNPALIN 756
L + P R T L TP+ N+T + T S S + P A + S L +PA
Sbjct: 116 LSTNGAPPRSTP--PLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASST 173
Query: 757 MATGN 771
+T +
Sbjct: 174 SSTSS 178
Score = 24.2 bits (50), Expect = 1.2
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Frame = +1
Query: 583 SRSPPSR---DTARRALPTPAPLNSTLRTSPTEK--TSNSLTK 696
S SPP + TA + L +PA +ST TS TEK T+N+ +K
Sbjct: 150 STSPPGKPATSTASQNLSSPA--SSTSSTSSTEKAGTNNNNSK 190
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 24.2 bits (50), Expect = 1.2
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +1
Query: 577 LGSRSPPSRDTARRALPTPAPLNSTLRTSPTEKTSNSLTKP*HSALTILSGLLRNPALIN 756
L + P R T L TP+ N+T + T S S + P A + S L +PA
Sbjct: 116 LSTNGAPPRSTP--PLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASST 173
Query: 757 MATGN 771
+T +
Sbjct: 174 SSTSS 178
Score = 24.2 bits (50), Expect = 1.2
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Frame = +1
Query: 583 SRSPPSR---DTARRALPTPAPLNSTLRTSPTEK--TSNSLTK 696
S SPP + TA + L +PA +ST TS TEK T+N+ +K
Sbjct: 150 STSPPGKPATSTASQNLSSPA--SSTSSTSSTEKAGTNNNNSK 190
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.2
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +1
Query: 577 LGSRSPPSRDTARRALPTPAPLNSTLRTSPTEKTSNSLTKP*HSALTILSGLLRNPALIN 756
L + P R T L TP+ N+T + T S S + P A + S L +PA
Sbjct: 116 LSTNGAPPRSTP--PLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASST 173
Query: 757 MATGN 771
+T +
Sbjct: 174 SSTSS 178
Score = 24.2 bits (50), Expect = 1.2
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Frame = +1
Query: 583 SRSPPSR---DTARRALPTPAPLNSTLRTSPTEK--TSNSLTK 696
S SPP + TA + L +PA +ST TS TEK T+N+ +K
Sbjct: 150 STSPPGKPATSTASQNLSSPA--SSTSSTSSTEKAGTNNNNSK 190
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 24.2 bits (50), Expect = 1.2
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +1
Query: 577 LGSRSPPSRDTARRALPTPAPLNSTLRTSPTEKTSNSLTKP*HSALTILSGLLRNPALIN 756
L + P R T L TP+ N+T + T S S + P A + S L +PA
Sbjct: 116 LSTNGAPPRSTP--PLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASST 173
Query: 757 MATGN 771
+T +
Sbjct: 174 SSTSS 178
Score = 24.2 bits (50), Expect = 1.2
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Frame = +1
Query: 583 SRSPPSR---DTARRALPTPAPLNSTLRTSPTEK--TSNSLTK 696
S SPP + TA + L +PA +ST TS TEK T+N+ +K
Sbjct: 150 STSPPGKPATSTASQNLSSPA--SSTSSTSSTEKAGTNNNNSK 190
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 24.2 bits (50), Expect = 1.2
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +1
Query: 577 LGSRSPPSRDTARRALPTPAPLNSTLRTSPTEKTSNSLTKP*HSALTILSGLLRNPALIN 756
L + P R T L TP+ N+T + T S S + P A + S L +PA
Sbjct: 72 LSTNGAPPRSTP--PLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASST 129
Query: 757 MATGN 771
+T +
Sbjct: 130 SSTSS 134
Score = 24.2 bits (50), Expect = 1.2
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Frame = +1
Query: 583 SRSPPSR---DTARRALPTPAPLNSTLRTSPTEK--TSNSLTK 696
S SPP + TA + L +PA +ST TS TEK T+N+ +K
Sbjct: 106 STSPPGKPATSTASQNLSSPA--SSTSSTSSTEKAGTNNNNSK 146
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.2
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +1
Query: 577 LGSRSPPSRDTARRALPTPAPLNSTLRTSPTEKTSNSLTKP*HSALTILSGLLRNPALIN 756
L + P R T L TP+ N+T + T S S + P A + S L +PA
Sbjct: 116 LSTNGAPPRSTP--PLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASST 173
Query: 757 MATGN 771
+T +
Sbjct: 174 SSTSS 178
Score = 24.2 bits (50), Expect = 1.2
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Frame = +1
Query: 583 SRSPPSR---DTARRALPTPAPLNSTLRTSPTEK--TSNSLTK 696
S SPP + TA + L +PA +ST TS TEK T+N+ +K
Sbjct: 150 STSPPGKPATSTASQNLSSPA--SSTSSTSSTEKAGTNNNNSK 190
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.2
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +1
Query: 577 LGSRSPPSRDTARRALPTPAPLNSTLRTSPTEKTSNSLTKP*HSALTILSGLLRNPALIN 756
L + P R T L TP+ N+T + T S S + P A + S L +PA
Sbjct: 116 LSTNGAPPRSTP--PLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASST 173
Query: 757 MATGN 771
+T +
Sbjct: 174 SSTSS 178
Score = 24.2 bits (50), Expect = 1.2
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Frame = +1
Query: 583 SRSPPSR---DTARRALPTPAPLNSTLRTSPTEK--TSNSLTK 696
S SPP + TA + L +PA +ST TS TEK T+N+ +K
Sbjct: 150 STSPPGKPATSTASQNLSSPA--SSTSSTSSTEKAGTNNNNSK 190
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 22.2 bits (45), Expect = 4.9
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 595 PSRDTARRALPTPAPLNSTLRTSPTEKTSNS 687
P D P PAPL S L P T+++
Sbjct: 80 PEPDPEIPVAPEPAPLASPLVQEPGSSTTSA 110
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 461 LLLQSRGCAFHAVRP 505
L +SR C +HAV P
Sbjct: 608 LAARSRRCCYHAVAP 622
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 461 LLLQSRGCAFHAVRP 505
L +SR C +HAV P
Sbjct: 500 LAARSRRCCYHAVAP 514
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 183 KQQLDGDSLSPDSRESVEV 239
+QQ+DG PDS S+ +
Sbjct: 100 QQQMDGQEYRPDSPSSMHM 118
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 183 KQQLDGDSLSPDSRESVEV 239
+QQ+DG PDS S+ +
Sbjct: 102 QQQMDGQEYRPDSPSSMHM 120
>EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450
protein.
Length = 493
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = -2
Query: 205 ESPSNCCFRKFTILAATILISFDISIF 125
E P NC ++F +L + + ++ + F
Sbjct: 432 EGPRNCIGQRFALLVSKVALASVVKDF 458
>DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory
protein 15 protein.
Length = 146
Score = 21.4 bits (43), Expect = 8.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 83 SVEAQYFAQLKAILKNRNVKRNQNSC 160
SVE ++ ILKN + RN C
Sbjct: 19 SVEYLILREIDTILKNDQMTRNYLDC 44
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,206
Number of Sequences: 336
Number of extensions: 2980
Number of successful extensions: 23
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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