Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0184
(797 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 128 7e-31
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 75 1e-14
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 66 4e-12
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 62 9e-11
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 49 9e-07
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 46 5e-06
SPAC2F3.02 |||ER protein translocation subcomplex subunit|Schizo... 46 6e-06
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 44 3e-05
SPBC24C6.05 |sec28||coatomer epsilon subunit |Schizosaccharomyce... 35 0.016
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 33 0.047
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 32 0.083
SPBC32H8.06 |mug93||TPR repeat protein, meiotically spliced|Schi... 31 0.14
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 29 0.58
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 27 4.1
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 27 4.1
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 26 5.4
SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces ... 26 7.2
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 26 7.2
SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces pomb... 26 7.2
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 26 7.2
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 25 9.5
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 25 9.5
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 9.5
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 25 9.5
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 128 bits (310), Expect = 7e-31
Identities = 76/200 (38%), Positives = 112/200 (56%), Gaps = 11/200 (5%)
Frame = +3
Query: 156 VAASIVNFLKQQLDGDSLSPDSRESVEVGVQCIETAFELTTED-----------AARGLD 302
V A+I+++LKQ + S+S + +ES+EV QCI+ +F++ E+ A +
Sbjct: 6 VTAAIIDYLKQAITTGSISEEEKESLEVAAQCIQDSFKIKPEEIKPKSGDRLVAAFEEYE 65
Query: 303 LLQLVRQRLGPPANKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAA 482
L V + NK EAE+LK EGN + A+ Y +AL+ YT+AIEIDP + VYY NRAA
Sbjct: 66 KLHPVEEDSTAHVNKEEAEKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAA 125
Query: 483 AHFMLCDPDAAVSDCTTALALQPDYSKAYGRLGLALTALERHCEXXXXXXXXXQLDPENE 662
A+ L + AV D T L+L P +++A+GRLG A +L DP NE
Sbjct: 126 AYNQLGQFENAVEDALTCLSLDPHHARAFGRLGRAKLSLGDAAAAADAYKKGLDFDPNNE 185
Query: 663 SYRENLQLADQTLAQRPNDS 722
+ L+ A++ L Q P+DS
Sbjct: 186 VLKRGLEAANKQLNQ-PSDS 204
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 74.9 bits (176), Expect = 1e-14
Identities = 40/115 (34%), Positives = 62/115 (53%)
Frame = +3
Query: 351 EAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFMLCDPDAAVSDCT 530
EA LKNE N+ +K +A++ YT+AIE+D NA+ Y NR+ AH D A++D +
Sbjct: 4 EALELKNEANKFLKEGHIVQAIDLYTKAIELDSTNAILYSNRSLAHLKSEDYGLAINDAS 63
Query: 531 TALALQPDYSKAYGRLGLALTALERHCEXXXXXXXXXQLDPENESYRENLQLADQ 695
A+ P+Y+KAY R A A+ + E L P + + R+ L+ +Q
Sbjct: 64 KAIECDPEYAKAYFRRATAHIAIFQPKEAVGDFRKALALAPSDPAARKKLRECEQ 118
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 66.5 bits (155), Expect = 4e-12
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Frame = +3
Query: 357 ERLKNEGNELMKAERYNEALEKYTRAIEIDPRN----AVYYCNRAAAHFMLCDPDAAVSD 524
E KN+GN+L + Y +A EKY+ A++IDP N A Y NRA L P+ A+SD
Sbjct: 224 ENTKNQGNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKLYMNRATVLLRLKRPEEALSD 283
Query: 525 CTTALALQPDYSKAYGRLGLALTALERHCEXXXXXXXXXQLDPENESYRENLQ 683
ALA+ Y K A ALE+ E +LD + + R+ L+
Sbjct: 284 SDNALAIDSSYLKGLKVRAKAHEALEKWEEAVRDVQSAIELDASDANLRQELR 336
Score = 54.0 bits (124), Expect = 2e-08
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +3
Query: 354 AERLKNEGNELMKAERYNEALEKYTRAIEI--DPRNAVYYCNRAAAHFMLCDPDAAVSDC 527
AE+ K GN K ++Y EA++ YT AI++ D A+YY NRAA + + + + A+ D
Sbjct: 23 AEKQKAIGNAFYKEKKYAEAIKAYTEAIDLGSDSALAIYYSNRAATYMQIGEFELALCDA 82
Query: 528 TTALALQPDYSKAYGRLGLALTAL 599
+ ++PD K R+ A L
Sbjct: 83 KQSDRIKPDVPKTQSRIRQAYEGL 106
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 62.1 bits (144), Expect = 9e-11
Identities = 36/122 (29%), Positives = 64/122 (52%)
Frame = +3
Query: 342 NKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFMLCDPDAAVS 521
+KAE R+K GNEL K+ + A+++YT + P + + NRAAA+ + P +
Sbjct: 397 DKAEESRVK--GNELFKSGDFANAIKEYTEMTKRAPSDPRGFGNRAAAYLKVMAPAECIR 454
Query: 522 DCTTALALQPDYSKAYGRLGLALTALERHCEXXXXXXXXXQLDPENESYRENLQLADQTL 701
DC A+ L P+++KAY R AL L+ + + ++D + +NL+ + L
Sbjct: 455 DCNKAIELDPNFAKAYVRKAQALFMLKDYNKCIDACNEASEVDRREPNTGKNLREIESQL 514
Query: 702 AQ 707
++
Sbjct: 515 SK 516
Score = 61.7 bits (143), Expect = 1e-10
Identities = 31/82 (37%), Positives = 46/82 (56%)
Frame = +3
Query: 354 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFMLCDPDAAVSDCTT 533
AE LK +GN + Y A++ +T+AI +D RN + Y NR+A + D A+ D T
Sbjct: 2 AEELKAKGNAAFSKKDYKTAIDYFTQAIGLDERNHILYSNRSACYASEKDYADALKDATK 61
Query: 534 ALALQPDYSKAYGRLGLALTAL 599
L+PD++K + R G AL L
Sbjct: 62 CTELKPDWAKGWSRKGAALHGL 83
Score = 38.3 bits (85), Expect = 0.001
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Frame = +3
Query: 339 ANKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFMLCDPDAAV 518
A K +A++ K GNE K + A+E+Y +A + ++ Y N AAA+F D +
Sbjct: 260 ALKKKADQEKQIGNENYKKRNFPVAIEQYKKAWD-TYKDITYLNNLAAAYFEADQLDDCI 318
Query: 519 SDCTTAL----ALQPDY---SKAYGRLG 581
C A+ L+ D+ +KA GRLG
Sbjct: 319 KTCEDAIEQGRELRADFKLIAKALGRLG 346
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 48.8 bits (111), Expect = 9e-07
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Frame = +3
Query: 354 AERLKNEGNELMKAERYNEALEKYTRAI-----EIDPRNAVYYCNRAAAHFMLCDPDAAV 518
A+ + GNE ++RY +A E YT+A+ + D A Y NRAA + + + +
Sbjct: 64 AQNFREHGNECFASKRYKDAEEFYTKALAQKCGDKDIEIACY-SNRAACNLLFENYRQVL 122
Query: 519 SDCTTALALQPDYSKAYGRLGLALTALERHCE 614
+DC L ++KAY R AL AL+R+ E
Sbjct: 123 NDCAQVLQRDSTHAKAYYRSAKALVALKRYDE 154
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 46.4 bits (105), Expect = 5e-06
Identities = 26/82 (31%), Positives = 41/82 (50%)
Frame = +3
Query: 354 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFMLCDPDAAVSDCTT 533
A LK GN+ + Y A++ YT+AI + +++ NRAA + + D + + D +
Sbjct: 151 AAELKTLGNKAYGQKEYANAIDYYTQAITCS-HDPIFFSNRAACYAAIGDFEQVIKDTSE 209
Query: 534 ALALQPDYSKAYGRLGLALTAL 599
AL+L Y KA R A L
Sbjct: 210 ALSLDSSYVKALNRRSAAYEQL 231
>SPAC2F3.02 |||ER protein translocation subcomplex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 192
Score = 46.0 bits (104), Expect = 6e-06
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 13/102 (12%)
Frame = +3
Query: 339 ANKAEAERLKNEGNELMKAERYNEALEKYTRAIEI-------DP------RNAVYYCNRA 479
A + ++K NE K ++Y EA + Y A+++ +P +V CNRA
Sbjct: 57 ALSTQVNKMKQTANEAFKRKKYEEAKKLYGLALQLALNRCTWEPSILTREEASVMLCNRA 116
Query: 480 AAHFMLCDPDAAVSDCTTALALQPDYSKAYGRLGLALTALER 605
AA L A++D AL ++ +Y K Y R AL A+ R
Sbjct: 117 AAEIALSQFPEALADANAALKIRNNYGKCYYRKAKALEAMHR 158
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 44.0 bits (99), Expect = 3e-05
Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 1/152 (0%)
Frame = +3
Query: 234 EVGVQCIETAFELTTEDAARGLDLLQLVRQRLGPPANKAEAERLKNEGNELMKAERYNEA 413
++G C + + T +D A +Q + + L A+ +A+ G + ++YN+A
Sbjct: 551 QLGWLCHQQSSSFTNQDLA-----IQYLTKSL--EADDTDAQSWYLIGRCYVAQQKYNKA 603
Query: 414 LEKYTRAIEIDPRNAVYYCNRAAAHFMLCDPDAAVSDCTTALALQPDYSKAYGRLGLALT 593
E Y +A+ D RN ++C+ ++ + A+ + A+ L P S+ + LG
Sbjct: 604 YEAYQQAVYRDGRNPTFWCSIGVLYYQINQYQDALDAYSRAIRLNPYISEVWYDLGTLYE 663
Query: 594 ALERH-CEXXXXXXXXXQLDPENESYRENLQL 686
+ + +LDP N + LQL
Sbjct: 664 SCHNQISDALDAYQRAAELDPTNPHIKARLQL 695
>SPBC24C6.05 |sec28||coatomer epsilon subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 288
Score = 34.7 bits (76), Expect = 0.016
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +3
Query: 396 ERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFMLCDPDAAVSDCTTALALQPDYSKAYGR 575
E YN+A + D N + A A L P+ A+S TAL QP+Y +A
Sbjct: 177 ESYNDAFYVFEELNGTDS-NPMTLTGMACADICLLRPEEALSSLKTALDSQPNYEEALSN 235
Query: 576 LGLALTAL 599
+ A+T L
Sbjct: 236 MTTAITDL 243
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 33.1 bits (72), Expect = 0.047
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Frame = +1
Query: 310 SLSVSDWGRPLTRLKPNDSRTKATSS*KLSVTTKRLKST----RAP*RSTQETQSTTAIA 477
S SV + P+T +S T TSS L+ +T ST P S+ S+TAIA
Sbjct: 3398 SSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSTVVNSSTPITSSSVLNSSTAIA 3457
Query: 478 RLRISCCATPMQR*ATVPQHSPY-SLTIARRTDALGSRSPPSRDTARRALPTPAPLNSTL 654
I +TP+ + + +P S T+ + +GS S S + ++ + LNS+L
Sbjct: 3458 SSSILNSSTPITSSSVLNSSTPISSSTVITSSVVIGSSSVLSYAS---SIVSSVSLNSSL 3514
Query: 655 RTSPTEKTSNSLTKP*HS-ALTILSGLLRNPALIN 756
+S +S++ + S +LT +G + + +L++
Sbjct: 3515 LSSSGGFSSSAFSTGSSSFSLTSENGSVSSSSLVS 3549
Score = 27.9 bits (59), Expect = 1.8
Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 7/185 (3%)
Frame = +1
Query: 232 SKSACNALRPLSS*RRKMRLEAWTYCSLSVSDWGRPLTRLKPNDSRTKATSS*KLS---- 399
S +A N P++S + + S SV + P+T ++ T TSS L+
Sbjct: 626 SSTALNTSTPITS--SSVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTP 683
Query: 400 VTTKRLKSTRAP*RSTQETQSTTAIARLRISCCATPMQR*ATVPQHSPYSLTIARRTDAL 579
+T+ +T P S+ S+TAI +TP+ + + +P + + A T
Sbjct: 684 ITSSTALNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPITSSTALNT--- 740
Query: 580 GSRSPPSRDTARRALPTPAPLNSTLRTS-PTEKTS--NSLTKP*HSALTILSGLLRNPAL 750
S P ++ TP +S L +S P +S NS T S + S + + ++
Sbjct: 741 ---STPITSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSSV 797
Query: 751 INMAT 765
+N +T
Sbjct: 798 LNSST 802
Score = 27.9 bits (59), Expect = 1.8
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 5/183 (2%)
Frame = +1
Query: 232 SKSACNALRPLSS*RRKMRLEAWTYCSLSVSDWGRPLTRLKPNDSRTKATSS*KLS---- 399
S S N+ P++S + + S S+ + P+T +S T TSS ++
Sbjct: 3098 SSSIVNSSTPITS--SSVLNSSTAITSSSILNSSTPITSSSILNSSTPITSSTVVNSSTP 3155
Query: 400 VTTKRLKSTRAP*RSTQETQSTTAIARLRISCCATPMQR*ATVPQHSPY-SLTIARRTDA 576
+T+ +T P S+ S+TAI I +TP+ + + +P S T +
Sbjct: 3156 ITSSTTLNTSTPITSSSVLNSSTAITSSSIVNSSTPITSSSVLNSSTPITSSTTLNTSTP 3215
Query: 577 LGSRSPPSRDTARRALPTPAPLNSTLRTSPTEKTSNSLTKP*HSALTILSGLLRNPALIN 756
+ S S + T A+ + + LNS+ + + NS T S + S + + +++N
Sbjct: 3216 ITSSSVLNSST---AITSSSVLNSSTPIT-SSSVLNSSTPITSSTVVNTSTPITSSSVLN 3271
Query: 757 MAT 765
+T
Sbjct: 3272 SST 3274
Score = 27.1 bits (57), Expect = 3.1
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Frame = +1
Query: 310 SLSVSDWGRPLTRLKPNDSRTKATSS*KLS----VTTKRLKSTRAP*RSTQETQSTTAIA 477
S +V + P+T L +S T TSS L+ +T+ + +T P S+ S+T I
Sbjct: 2558 SSTVVNSSTPITSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPIT 2617
Query: 478 RLRISCCATPMQR*ATVPQHSPYSLTIARRTD-ALGSRSPPSRD---TARRALPTPAPL- 642
+TP+ + + +P + + A T ++ S S + T+ + T P+
Sbjct: 2618 SSTALNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPIT 2677
Query: 643 NSTLRTSPTEKTSNSL 690
+S++ S T TS+++
Sbjct: 2678 SSSVLNSSTPITSSTV 2693
Score = 26.6 bits (56), Expect = 4.1
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 9/135 (6%)
Frame = +1
Query: 310 SLSVSDWGRPLTRLKPNDSRTKATSS*KLS----VTTKRLKSTRAP*RSTQETQSTTAIA 477
S +V + P+T ++ T TSS L+ +T+ +T P S+ S+TAI
Sbjct: 3290 SSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTAIT 3349
Query: 478 RLRISCCATPMQR*ATVPQHSPY-SLTIARRTDALGSRSPPSRD---TARRALPTPAPL- 642
I +TP+ + + +P S T+ + + S + + T+ L + P+
Sbjct: 3350 SSSILNSSTPVTSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPIT 3409
Query: 643 NSTLRTSPTEKTSNS 687
+ST+ S T TS++
Sbjct: 3410 SSTVVNSSTPITSST 3424
Score = 25.8 bits (54), Expect = 7.2
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Frame = +1
Query: 310 SLSVSDWGRPLTRLKPNDSRTKATSS*KL----SVTTKRLKSTRAP*RSTQETQSTTAIA 477
S +V + P+T +S T TSS + S+T+ + ++ P S+ S+T I
Sbjct: 2390 SSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTSITSSSVLNSSTPITSSSVLNSSTPIT 2449
Query: 478 RLRISCCATPMQR*ATVPQHSPYSLTIARRTDA-LGSRSPPSRD---TARRALPTPAPL- 642
+ +TP+ + + +P + + A T + S S + T+ + T P+
Sbjct: 2450 SSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPIT 2509
Query: 643 NSTLRTSPTEKTSNSL 690
+ST+ S T TS+++
Sbjct: 2510 SSTVVNSSTPITSSTV 2525
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 32.3 bits (70), Expect = 0.083
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 345 KAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNA 458
+A R+ N+ +L + + Y +A++ Y +AI+ DP+NA
Sbjct: 631 QAREFRVHNDREKLKRQKLYIKAIQSYDQAIKFDPKNA 668
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 375 GNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFMLCD 503
G E + E++ T A+E +P N N A F LC+
Sbjct: 751 GRESKNVDYLKESVRYATLALEKNPENPSLLFNVAFVQFQLCE 793
>SPBC32H8.06 |mug93||TPR repeat protein, meiotically
spliced|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 31.5 bits (68), Expect = 0.14
Identities = 22/91 (24%), Positives = 34/91 (37%)
Frame = +3
Query: 408 EALEKYTRAIEIDPRNAVYYCNRAAAHFMLCDPDAAVSDCTTALALQPDYSKAYGRLGLA 587
+ +++ AI + Y + + H V DCT AL + P K R GLA
Sbjct: 25 DVFDEFLNAIGNENTITPVYADSSLTHLRKKSYTKVVHDCTYALVINPYDKKVIWRRGLA 84
Query: 588 LTALERHCEXXXXXXXXXQLDPENESYRENL 680
L +LDP N +++L
Sbjct: 85 YLRLGHPHLANRDWEHSLELDPNNTYIQKSL 115
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 29.5 bits (63), Expect = 0.58
Identities = 24/112 (21%), Positives = 45/112 (40%)
Frame = +3
Query: 366 KNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFMLCDPDAAVSDCTTALAL 545
K+ N+L+K + Y L+ R++ +ML + + + AL
Sbjct: 410 KDSANDLLKMQMY--FLDVAYELSLAKKRSSKVQAGLGIIMYMLKEYERSADCFRQALQD 467
Query: 546 QPDYSKAYGRLGLALTALERHCEXXXXXXXXXQLDPENESYRENLQLADQTL 701
+P + +LG ALT E++ E L P+ R N+ +++ L
Sbjct: 468 EPSNEILWNKLGAALTNAEKNTEAVSSYNRAVSLQPQYVRVRSNMAVSNINL 519
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 26.6 bits (56), Expect = 4.1
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = -1
Query: 539 ECCGTVAHRCIGVAQHEMRSRAIAVVDCVSWVDLYGARVLFKRFVVTLSFHELVAFVLES 360
+ CGT+ CI + H++R A SW +G +L+ F++ V F+ ES
Sbjct: 155 QTCGTLIAACINMGTHKLRKTA-------SWRTSFGINILWGIFLMV-----GVLFLPES 202
Query: 359 FGFSLVSGRPQ 327
+ + GR +
Sbjct: 203 PRYLIYKGRDE 213
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 583 SRSPPSRDTARRALPTPAPLNSTLRTSPTEKTSNSLTKP 699
SR P ++ R A+P +PL STL + L++P
Sbjct: 457 SRVPSYKEATRSAVPLESPLQSTLPSYEDVARIEHLSRP 495
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 535 HSPYSLTIARRTDALGSRSPPSRDTARRALPTPAPLNSTLRTSP 666
H P+S T + S +PP + R+L TP P+ S P
Sbjct: 239 HDPFSQTFGKECPI--STAPPVLNIGDRSLETPPPIPSPRPPQP 280
>SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 862
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 657 NESYRENLQLADQTLAQRPNDSEWLTXESCFDQHG 761
+ SY+EN QL N WLT S F + G
Sbjct: 685 HSSYKENFQLRRGKTVSYLNQKLWLTAASLFLKSG 719
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 25.8 bits (54), Expect = 7.2
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 589 SPPSRDTARRALPTPAPLNSTLRTSPTEK--TSNSLTKP*HSALTILSGLLRNPALINMA 762
+P D LP+ +S++ T P+ T NS T ++ SG+ R+P L+N +
Sbjct: 328 NPTVNDRVSNVLPSITSFDSSVTTVPSNSPATLNSYTT------SVPSGMSRHPMLMNPS 381
Query: 763 T 765
T
Sbjct: 382 T 382
>SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1136
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +3
Query: 363 LKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFMLCDP 506
L NE K Y + +I DP NAV Y N A + DP
Sbjct: 498 LYNEWERFAKLVAYLDHFGDEILSINFDPSNAVTYINYANKVAFIRDP 545
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 333 PPANKAEA-ERLKNEGNELMKAERYNEALEKYTRAI 437
P ++ + A E+L +GN + Y EA++KY +A+
Sbjct: 24 PSSSDSRAIEQLVTQGNMAYAQKNYEEAVDKYGQAL 59
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 562 RRTDALGSRSPPSRDTARRALPTPAPLNSTLRTSPTEKTSNSLTKP 699
++TD L ++ D R LP P+P S +S K + S+ P
Sbjct: 520 KQTDLLQNKPEALLDLENRFLPKPSPKPSEFSSSVGSKQNLSMDIP 565
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 397 SVTTKRLKSTRAP*RSTQETQSTTAIARLRISCCATPMQR*ATVP 531
+ TT +++T P T T A+ L ++ TPM+ T P
Sbjct: 165 TTTTPMVETTTIPTVETMTTPMVEAMTILPMAAMTTPMEETTTTP 209
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.4 bits (53), Expect = 9.5
Identities = 25/93 (26%), Positives = 39/93 (41%)
Frame = +1
Query: 403 TTKRLKSTRAP*RSTQETQSTTAIARLRISCCATPMQR*ATVPQHSPYSLTIARRTDALG 582
T+ ST P ST T ++++ + C T T +P + T+ + +
Sbjct: 308 TSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSST 367
Query: 583 SRSPPSRDTARRALPTPAPLNSTLRTSPTEKTS 681
S PP T+ + +PL ST TS T TS
Sbjct: 368 STPPPPASTSSTG-TSSSPLLST-STSCTTSTS 398
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 568 TDALGSRSPPSRDTARRALPTPAPLNSTLRTSPTEKTSNS 687
T A + S P+ TAR TP P +T TS + TSNS
Sbjct: 144 TTANRTTSTPTTTTARTTRTTPRP-TATTNTS-NQSTSNS 181
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,801,873
Number of Sequences: 5004
Number of extensions: 50967
Number of successful extensions: 220
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 214
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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