Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0180
         (662 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146740-1|AAO12100.1|  139|Anopheles gambiae odorant-binding pr...    26   1.2  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   2.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.1  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    24   4.9  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           23   6.5  
AY748847-1|AAV28193.1|  104|Anopheles gambiae cytochrome P450 pr...    23   6.5  

>AY146740-1|AAO12100.1|  139|Anopheles gambiae odorant-binding
           protein AgamOBP9 protein.
          Length = 139

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 423 CLRSFAPRGIPSHRRDKPESWRWPPRNSTSCYQK 524
           C++S    G+     +K +SW +P  ++T CY K
Sbjct: 34  CVKSL---GVSDELVEKYKSWNFPEDDTTQCYIK 64


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 14/52 (26%), Positives = 21/52 (40%)
 Frame = -1

Query: 569 DRLSADIEPARXCWPLLIARSTVAWRPAPGLRLVAPVGRDPSWSERTQTQAP 414
           D+ +  ++     WP +  RS +  R      LV    R   W E T T+ P
Sbjct: 549 DKQAVKMDSGSEHWPFMTERSELKDRLPSVWYLVRQFDRADQWMEYTYTKDP 600


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 14/52 (26%), Positives = 21/52 (40%)
 Frame = -1

Query: 569 DRLSADIEPARXCWPLLIARSTVAWRPAPGLRLVAPVGRDPSWSERTQTQAP 414
           D+ +  ++     WP +  RS +  R      LV    R   W E T T+ P
Sbjct: 550 DKQAVKMDSGSEHWPFMTERSELKDRLPSVWYLVRQFDRADQWMEYTYTKDP 601


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 15/57 (26%), Positives = 22/57 (38%)
 Frame = -3

Query: 558 SGHRAGKXLLATSDSKKYCCVAASARTPACRAGGKGSLVERTNADTSTFCRICGCRC 388
           S  R  K L+  +   K C +    R  A +A G  + +  +   T    R C C C
Sbjct: 188 SSVRPSKGLIPVAPGAK-CPITTCGRNEALQACGTCNQITCSGISTEVCRRSCYCGC 243


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 480 TPACRAGGKGSLVERTNADTSTFCRIC 400
           TP   +GG+ ++ ER        CR C
Sbjct: 313 TPIANSGGRTTMAERLLKLNEYICRTC 339


>AY748847-1|AAV28193.1|  104|Anopheles gambiae cytochrome P450
           protein.
          Length = 104

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +2

Query: 2   LCWHLCLSXANYXQDPDYQKQIVPCVVKLFASNDRTTRSRLLQQL 136
           +CW L L   +    PD Q Q+   +  +F  +DR    R L ++
Sbjct: 44  MCWALFLLALH----PDIQHQVHQEIDSIFGGSDRAPTMRDLNEM 84


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,093
Number of Sequences: 2352
Number of extensions: 12894
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)