Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0180
(662 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-4434|AAF56933.1| 873|Drosophila melanogaster CG1973-PA... 334 8e-92
AY119220-1|AAM51080.1| 104|Drosophila melanogaster SD16627p pro... 34 0.20
AY069624-1|AAL39769.1| 835|Drosophila melanogaster LD39455p pro... 33 0.35
AE014297-4301|AAF56841.1| 835|Drosophila melanogaster CG1951-PA... 33 0.35
AY058471-1|AAL13700.1| 429|Drosophila melanogaster GH27496p pro... 31 1.1
AE014297-3742|AAF56422.1| 429|Drosophila melanogaster CG10420-P... 31 1.1
BT003570-1|AAO39574.1| 614|Drosophila melanogaster LD45290p pro... 31 1.8
AY058496-1|AAL13725.1| 647|Drosophila melanogaster LD03170p pro... 31 1.8
AF255674-1|AAG18329.1| 647|Drosophila melanogaster rho guanine ... 31 1.8
AE014296-1222|AAN12050.1| 600|Drosophila melanogaster CG8606-PB... 31 1.8
AE014296-1221|AAF50584.1| 647|Drosophila melanogaster CG8606-PA... 31 1.8
AF149047-1|AAF73149.1| 900|Drosophila melanogaster Su(z)12 prot... 29 4.3
AE014296-3246|AAN11641.1| 900|Drosophila melanogaster CG8013-PB... 29 4.3
BT023777-1|AAZ41786.1| 905|Drosophila melanogaster LD29489p pro... 28 9.9
AY119467-1|AAM50121.1| 581|Drosophila melanogaster GH04034p pro... 28 9.9
AE014297-544|AAF54074.3| 905|Drosophila melanogaster CG1965-PA ... 28 9.9
>AE014297-4434|AAF56933.1| 873|Drosophila melanogaster CG1973-PA
protein.
Length = 873
Score = 334 bits (820), Expect = 8e-92
Identities = 159/189 (84%), Positives = 171/189 (90%)
Frame = +2
Query: 50 DYQKQIVPCVVKLFASNDRTTRSRLLQQLDQFIMHLQNSTVNDQIFPQVVNGFLDTNAII 229
+YQK+IVPCVVKLFAS DR TRSRLLQQLD FI HLQ VNDQIFPQV +GFLDTNA I
Sbjct: 345 EYQKRIVPCVVKLFASTDRVTRSRLLQQLDLFIAHLQPQVVNDQIFPQVAHGFLDTNATI 404
Query: 230 REQTVKSIVHLASKLNYNNLNVEVLRHFARLQSKDDQGGIRTNTTVCLGKIAAHLHPQIR 409
REQTVKSI+HLA KLNYNNLNVEVLRHFARLQ++DDQGGIRTNTTVCLGKIA HLHPQ+R
Sbjct: 405 REQTVKSIIHLAPKLNYNNLNVEVLRHFARLQARDDQGGIRTNTTVCLGKIAPHLHPQVR 464
Query: 410 QKVLVSAFVRSTRDPFPPARQAGVLALAATQQYFLLSEVANRXLPALCPLTIDP*KQVRD 589
Q+VLVSAF+R+ RDPFPPAR AGVLALAATQQYFLLSEVANR LP+LC LT+DP K VRD
Sbjct: 465 QRVLVSAFIRAMRDPFPPARVAGVLALAATQQYFLLSEVANRVLPSLCSLTVDPEKTVRD 524
Query: 590 AAFKTIRGF 616
AFKTIRGF
Sbjct: 525 PAFKTIRGF 533
Score = 35.9 bits (79), Expect = 0.049
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 600 RRLEAFLGKLEKVSEDPSLKE 662
+ + FLGKLEKVSEDPSL+E
Sbjct: 528 KTIRGFLGKLEKVSEDPSLRE 548
>AY119220-1|AAM51080.1| 104|Drosophila melanogaster SD16627p
protein.
Length = 104
Score = 33.9 bits (74), Expect = 0.20
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 438 APRGI-PSHRRDKPESWRWPPRNSTSCYQKWPTXSC 542
APR + PS RR W PR+S C+ WPT C
Sbjct: 69 APRDVSPSCRRRTWVIRMWAPRSSGDCWPHWPTCPC 104
>AY069624-1|AAL39769.1| 835|Drosophila melanogaster LD39455p
protein.
Length = 835
Score = 33.1 bits (72), Expect = 0.35
Identities = 32/187 (17%), Positives = 77/187 (41%), Gaps = 4/187 (2%)
Frame = +2
Query: 20 LSXANYXQDPDYQKQIVPCVVKLFASNDRTTRSRL-LQQLDQFIMHLQNSTVNDQIFPQV 196
L A +Y I+P + +F D + +Q++D + V + P +
Sbjct: 381 LLIAEMSSQREYCDHILPHLKPIFKLTDPIQILLIFMQKMDLLLKLTPAEEVKQSVLPLL 440
Query: 197 VNGFLDTNAIIREQTVKSIVHLASKLNYNNLNVEVLRHFARLQSKDDQGGIRTNTTVCLG 376
I++ + + ++ ++YN + VL +L + ++ N + +G
Sbjct: 441 YRSLECDMPQIQDLCLAVLPTFSTLIDYNAMKNSVLPRIKKLCLQSSNVSVKVNCLISIG 500
Query: 377 KIAAHLHP-QIRQKVLVSAFVRSTRDPFPPARQAGVLALAATQQYFLLSE--VANRXLPA 547
K+ +L + ++L +R+P G+ +A T +++ +A++ +P
Sbjct: 501 KLLENLDKWLVLDEILPFLQQIQSREPAIIMGIIGIYKIAMTNTKLGITKDVMAHKCIPY 560
Query: 548 LCPLTID 568
L PL+++
Sbjct: 561 LVPLSVE 567
>AE014297-4301|AAF56841.1| 835|Drosophila melanogaster CG1951-PA
protein.
Length = 835
Score = 33.1 bits (72), Expect = 0.35
Identities = 32/187 (17%), Positives = 77/187 (41%), Gaps = 4/187 (2%)
Frame = +2
Query: 20 LSXANYXQDPDYQKQIVPCVVKLFASNDRTTRSRL-LQQLDQFIMHLQNSTVNDQIFPQV 196
L A +Y I+P + +F D + +Q++D + V + P +
Sbjct: 381 LLIAEMSSQREYCDHILPHLKPIFKLTDPIQILLIFMQKMDLLLKLTPAEEVKQSVLPLL 440
Query: 197 VNGFLDTNAIIREQTVKSIVHLASKLNYNNLNVEVLRHFARLQSKDDQGGIRTNTTVCLG 376
I++ + + ++ ++YN + VL +L + ++ N + +G
Sbjct: 441 YRSLECDMPQIQDLCLAVLPTFSTLIDYNAMKNSVLPRIKKLCLQSSNVSVKVNCLISIG 500
Query: 377 KIAAHLHP-QIRQKVLVSAFVRSTRDPFPPARQAGVLALAATQQYFLLSE--VANRXLPA 547
K+ +L + ++L +R+P G+ +A T +++ +A++ +P
Sbjct: 501 KLLENLDKWLVLDEILPFLQQIQSREPAIIMGIIGIYKIAMTNTKLGITKDVMAHKCIPY 560
Query: 548 LCPLTID 568
L PL+++
Sbjct: 561 LVPLSVE 567
>AY058471-1|AAL13700.1| 429|Drosophila melanogaster GH27496p
protein.
Length = 429
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +2
Query: 122 LLQQLDQFIMHLQNSTVNDQIFPQVVNGFLDTNAIIREQTVKSIVHLAS 268
LL Q+D +M + N ++D + P VVN DT+ +R ++ + LAS
Sbjct: 173 LLHQIDNALMFIDNGGLDDVLLPIVVN---DTSTSLRVSAMRVLGSLAS 218
>AE014297-3742|AAF56422.1| 429|Drosophila melanogaster CG10420-PA
protein.
Length = 429
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +2
Query: 122 LLQQLDQFIMHLQNSTVNDQIFPQVVNGFLDTNAIIREQTVKSIVHLAS 268
LL Q+D +M + N ++D + P VVN DT+ +R ++ + LAS
Sbjct: 173 LLHQIDNALMFIDNGGLDDVLLPIVVN---DTSTSLRVSAMRVLGSLAS 218
>BT003570-1|AAO39574.1| 614|Drosophila melanogaster LD45290p
protein.
Length = 614
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +2
Query: 44 DPDYQKQIVPCVVKLFASNDRTTRSRLLQQLDQFIMHLQNSTVNDQIFPQVVNGFLDTNA 223
D DY K + V ++ A+ Q++ Q+++HLQNS VN P +V +
Sbjct: 190 DADY-KLLKESVKEIEATASHINTCVEEQEITQYLIHLQNSLVNRT--PNIVK---PSRR 243
Query: 224 IIREQTVKSIVHLASKL 274
+I+E ++ I H +++
Sbjct: 244 VIKEGVLQKITHKGTEI 260
>AY058496-1|AAL13725.1| 647|Drosophila melanogaster LD03170p
protein.
Length = 647
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +2
Query: 44 DPDYQKQIVPCVVKLFASNDRTTRSRLLQQLDQFIMHLQNSTVNDQIFPQVVNGFLDTNA 223
D DY K + V ++ A+ Q++ Q+++HLQNS VN P +V +
Sbjct: 223 DADY-KLLKESVKEIEATASHINTCVEEQEITQYLIHLQNSLVNRT--PNIVK---PSRR 276
Query: 224 IIREQTVKSIVHLASKL 274
+I+E ++ I H +++
Sbjct: 277 VIKEGVLQKITHKGTEI 293
>AF255674-1|AAG18329.1| 647|Drosophila melanogaster rho guanine
nucleotide exchangefactor 4 protein.
Length = 647
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +2
Query: 44 DPDYQKQIVPCVVKLFASNDRTTRSRLLQQLDQFIMHLQNSTVNDQIFPQVVNGFLDTNA 223
D DY K + V ++ A+ Q++ Q+++HLQNS VN P +V +
Sbjct: 223 DADY-KLLKESVKEIEATASHINTCVEEQEITQYLIHLQNSLVNRT--PNIVK---PSRR 276
Query: 224 IIREQTVKSIVHLASKL 274
+I+E ++ I H +++
Sbjct: 277 VIKEGVLQKITHKGTEI 293
>AE014296-1222|AAN12050.1| 600|Drosophila melanogaster CG8606-PB,
isoform B protein.
Length = 600
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +2
Query: 44 DPDYQKQIVPCVVKLFASNDRTTRSRLLQQLDQFIMHLQNSTVNDQIFPQVVNGFLDTNA 223
D DY K + V ++ A+ Q++ Q+++HLQNS VN P +V +
Sbjct: 176 DADY-KLLKESVKEIEATASHINTCVEEQEITQYLIHLQNSLVNRT--PNIVK---PSRR 229
Query: 224 IIREQTVKSIVHLASKL 274
+I+E ++ I H +++
Sbjct: 230 VIKEGVLQKITHKGTEI 246
>AE014296-1221|AAF50584.1| 647|Drosophila melanogaster CG8606-PA,
isoform A protein.
Length = 647
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +2
Query: 44 DPDYQKQIVPCVVKLFASNDRTTRSRLLQQLDQFIMHLQNSTVNDQIFPQVVNGFLDTNA 223
D DY K + V ++ A+ Q++ Q+++HLQNS VN P +V +
Sbjct: 223 DADY-KLLKESVKEIEATASHINTCVEEQEITQYLIHLQNSLVNRT--PNIVK---PSRR 276
Query: 224 IIREQTVKSIVHLASKL 274
+I+E ++ I H +++
Sbjct: 277 VIKEGVLQKITHKGTEI 293
>AF149047-1|AAF73149.1| 900|Drosophila melanogaster Su(z)12
protein.
Length = 900
Score = 29.5 bits (63), Expect = 4.3
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 337 SRRNKNEHNSLPR*DSGAPASADTAEGACVCVRSLHEGSLPTGATSRSPGAGR 495
+ RNK+ ++SLP + A +S+ ++ A RS E + +G+T G R
Sbjct: 836 ANRNKSNNHSLPATSNNASSSSSNSKRAIARRRSTSERTKASGSTGGGAGGVR 888
>AE014296-3246|AAN11641.1| 900|Drosophila melanogaster CG8013-PB,
isoform B protein.
Length = 900
Score = 29.5 bits (63), Expect = 4.3
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 337 SRRNKNEHNSLPR*DSGAPASADTAEGACVCVRSLHEGSLPTGATSRSPGAGR 495
+ RNK+ ++SLP + A +S+ ++ A RS E + +G+T G R
Sbjct: 836 ANRNKSNNHSLPATSNNASSSSSNSKRAIARRRSTSERTKASGSTGGGAGGVR 888
>BT023777-1|AAZ41786.1| 905|Drosophila melanogaster LD29489p
protein.
Length = 905
Score = 28.3 bits (60), Expect = 9.9
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Frame = +2
Query: 47 PDYQKQIVPCVVKLFASNDRTTRSRLLQQLDQFIMHLQNSTVNDQIFPQVVNGFLDTNAI 226
PDY++Q+ + RT R ++ D HL + +D+I Q + T A
Sbjct: 544 PDYEEQVRRAAER---EGRRTRRRCERERNDLLSSHLDGMSSDDEIADQQQELSVTTMAQ 600
Query: 227 IREQTVKSIVHLASKLNYNNLNVEVLRHFARLQSKDDQGGIR-TNTTVCLGKIAAHL 394
I Q+V ++ + +++ + + +++ FA K D + ++CL K+ A L
Sbjct: 601 IESQSVDALEDVTD--DFSKIELILMKFFA--WRKTDMSSYQDAFVSLCLPKVLAPL 653
>AY119467-1|AAM50121.1| 581|Drosophila melanogaster GH04034p
protein.
Length = 581
Score = 28.3 bits (60), Expect = 9.9
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Frame = +2
Query: 47 PDYQKQIVPCVVKLFASNDRTTRSRLLQQLDQFIMHLQNSTVNDQIFPQVVNGFLDTNAI 226
PDY++Q+ + RT R ++ D HL + +D+I Q + T A
Sbjct: 220 PDYEEQVRRAAER---EGRRTRRRCERERNDLLSSHLDGMSSDDEIADQQQELSVTTMAQ 276
Query: 227 IREQTVKSIVHLASKLNYNNLNVEVLRHFARLQSKDDQGGIR-TNTTVCLGKIAAHL 394
I Q+V ++ + +++ + + +++ FA K D + ++CL K+ A L
Sbjct: 277 IESQSVDALEDVTD--DFSKIELILMKFFA--WRKTDMSSYQDAFVSLCLPKVLAPL 329
>AE014297-544|AAF54074.3| 905|Drosophila melanogaster CG1965-PA
protein.
Length = 905
Score = 28.3 bits (60), Expect = 9.9
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Frame = +2
Query: 47 PDYQKQIVPCVVKLFASNDRTTRSRLLQQLDQFIMHLQNSTVNDQIFPQVVNGFLDTNAI 226
PDY++Q+ + RT R ++ D HL + +D+I Q + T A
Sbjct: 544 PDYEEQVRRAAER---EGRRTRRRCERERNDLLSSHLDGMSSDDEIADQQQELSVTTMAQ 600
Query: 227 IREQTVKSIVHLASKLNYNNLNVEVLRHFARLQSKDDQGGIR-TNTTVCLGKIAAHL 394
I Q+V ++ + +++ + + +++ FA K D + ++CL K+ A L
Sbjct: 601 IESQSVDALEDVTD--DFSKIELILMKFFA--WRKTDMSSYQDAFVSLCLPKVLAPL 653
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,294,610
Number of Sequences: 53049
Number of extensions: 587655
Number of successful extensions: 1909
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1909
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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