Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0179
(708 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023405-1|AAY55821.1| 274|Drosophila melanogaster IP01034p pro... 177 9e-45
AE014297-203|AAF52053.2| 256|Drosophila melanogaster CG12173-PA... 177 9e-45
BT022791-1|AAY55207.1| 278|Drosophila melanogaster IP13511p pro... 176 3e-44
AY061447-1|AAL28995.1| 1159|Drosophila melanogaster LD38375p pro... 31 1.5
AE014296-2859|AAF49383.1| 1159|Drosophila melanogaster CG7728-PA... 31 1.5
AY508412-1|AAS91579.1| 452|Drosophila melanogaster mitochondria... 29 4.7
AY122183-1|AAM52695.1| 1380|Drosophila melanogaster LD40412p pro... 29 4.7
AY060616-1|AAL28164.1| 452|Drosophila melanogaster GH04071p pro... 29 4.7
AE014297-4410|AAF56915.1| 1380|Drosophila melanogaster CG1911-PA... 29 4.7
AE014297-1076|AAF54482.2| 452|Drosophila melanogaster CG3910-PA... 29 4.7
>BT023405-1|AAY55821.1| 274|Drosophila melanogaster IP01034p
protein.
Length = 274
Score = 177 bits (432), Expect = 9e-45
Identities = 94/198 (47%), Positives = 131/198 (66%)
Frame = +1
Query: 115 SKVLLLDIEGTTTSISFVKDKLFPYAEENVKDFLDAQWDDEDVKEAVNALRKLAIEDQEK 294
+KV+L+DIEGTTTSISFV D LFPYA++NV+ FL W+++D+K V L+++ Q
Sbjct: 26 AKVVLVDIEGTTTSISFVHDVLFPYAKQNVEKFLRDSWEEDDIKRIVQDLQQV---PQYA 82
Query: 295 SVEGLVTIPGEDASKEDQIEGLVKNVKWQMSSDRKVAPLKQLQGLIWKKGYDKGDIKGHV 474
+ L++ P + D I G V++ + D KV P+K LQGLIW +GY G++KGHV
Sbjct: 83 DYKALLSGPPTEVD-VDLIAGF---VRYLIDQDLKVTPMKTLQGLIWAQGYANGELKGHV 138
Query: 475 YDDVLPALEQWRSVEGQKIYIYSSGSVQAQKLLFGQSSAGDLLPLIDGHFDTAVGAKQEA 654
Y+DV A E WR+ G +I +YSSGSV AQKL+FG S AG+L P + +FDT VG KQE
Sbjct: 139 YEDVPAAFEAWRAA-GLQIAVYSSGSVAAQKLIFGHSLAGNLQPYLSAYFDTHVGHKQEQ 197
Query: 655 TSYTAIVEKIGCKAEEIL 708
SY I +++ ++IL
Sbjct: 198 QSYKNIAKQLKEDPKQIL 215
>AE014297-203|AAF52053.2| 256|Drosophila melanogaster CG12173-PA
protein.
Length = 256
Score = 177 bits (432), Expect = 9e-45
Identities = 94/198 (47%), Positives = 131/198 (66%)
Frame = +1
Query: 115 SKVLLLDIEGTTTSISFVKDKLFPYAEENVKDFLDAQWDDEDVKEAVNALRKLAIEDQEK 294
+KV+L+DIEGTTTSISFV D LFPYA++NV+ FL W+++D+K V L+++ Q
Sbjct: 8 AKVVLVDIEGTTTSISFVHDVLFPYAKQNVEKFLRDSWEEDDIKRIVQDLQQV---PQYA 64
Query: 295 SVEGLVTIPGEDASKEDQIEGLVKNVKWQMSSDRKVAPLKQLQGLIWKKGYDKGDIKGHV 474
+ L++ P + D I G V++ + D KV P+K LQGLIW +GY G++KGHV
Sbjct: 65 DYKALLSGPPTEVD-VDLIAGF---VRYLIDQDLKVTPMKTLQGLIWAQGYANGELKGHV 120
Query: 475 YDDVLPALEQWRSVEGQKIYIYSSGSVQAQKLLFGQSSAGDLLPLIDGHFDTAVGAKQEA 654
Y+DV A E WR+ G +I +YSSGSV AQKL+FG S AG+L P + +FDT VG KQE
Sbjct: 121 YEDVPAAFEAWRAA-GLQIAVYSSGSVAAQKLIFGHSLAGNLQPYLSAYFDTHVGHKQEQ 179
Query: 655 TSYTAIVEKIGCKAEEIL 708
SY I +++ ++IL
Sbjct: 180 QSYKNIAKQLKEDPKQIL 197
>BT022791-1|AAY55207.1| 278|Drosophila melanogaster IP13511p
protein.
Length = 278
Score = 176 bits (428), Expect = 3e-44
Identities = 94/206 (45%), Positives = 135/206 (65%), Gaps = 1/206 (0%)
Frame = +1
Query: 94 IGDIVKKSKVLLL-DIEGTTTSISFVKDKLFPYAEENVKDFLDAQWDDEDVKEAVNALRK 270
+ D++ K++++L DIEGTTTSISFV D LFPYA++NV+ FL W+++D+K V L++
Sbjct: 22 VHDVLSKAQLILRQDIEGTTTSISFVHDVLFPYAKQNVEKFLRDSWEEDDIKRIVQDLQQ 81
Query: 271 LAIEDQEKSVEGLVTIPGEDASKEDQIEGLVKNVKWQMSSDRKVAPLKQLQGLIWKKGYD 450
+ Q + L++ P + D I G V++ + D KV P+K LQGLIW +GY
Sbjct: 82 V---PQYADYKALLSGPPTEVD-VDLIAGF---VRYLIDQDLKVTPMKTLQGLIWAQGYA 134
Query: 451 KGDIKGHVYDDVLPALEQWRSVEGQKIYIYSSGSVQAQKLLFGQSSAGDLLPLIDGHFDT 630
G++KGHVY+DV A E WR+ G +I +YSSGSV AQKL+FG S AG+L P + +FDT
Sbjct: 135 NGELKGHVYEDVPAAFEAWRAA-GLQIAVYSSGSVAAQKLIFGHSLAGNLQPYLSAYFDT 193
Query: 631 AVGAKQEATSYTAIVEKIGCKAEEIL 708
VG KQE SY I +++ ++IL
Sbjct: 194 HVGHKQEQQSYKNIAKQLKEDPKQIL 219
>AY061447-1|AAL28995.1| 1159|Drosophila melanogaster LD38375p
protein.
Length = 1159
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 190 AEENVKDFLDAQ-WDDEDVKEAVNALRKLAIEDQEKSVEGLVTIPGEDASKEDQIEGLVK 366
+EE +D DA W E+ +E +A + D+E G V E S +++ L
Sbjct: 449 SEEEQQDEFDADDWRGENSEEEEDAEEDASSGDEEYQSLGNVKTSNESDSDDEEARVLAS 508
Query: 367 NVKWQMSSDRK 399
N+ W+ + +K
Sbjct: 509 NMSWKTNLAQK 519
>AE014296-2859|AAF49383.1| 1159|Drosophila melanogaster CG7728-PA
protein.
Length = 1159
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 190 AEENVKDFLDAQ-WDDEDVKEAVNALRKLAIEDQEKSVEGLVTIPGEDASKEDQIEGLVK 366
+EE +D DA W E+ +E +A + D+E G V E S +++ L
Sbjct: 449 SEEEQQDEFDADDWRGENSEEEEDAEEDASSGDEEYQSLGNVKTSNESDSDDEEARVLAS 508
Query: 367 NVKWQMSSDRK 399
N+ W+ + +K
Sbjct: 509 NMSWKTNLAQK 519
>AY508412-1|AAS91579.1| 452|Drosophila melanogaster mitochondrial
transcription factorB2 protein.
Length = 452
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 256 NALRKLAIEDQEKSVEGLVTIPGEDASKEDQI 351
NAL KL + E ++E VT+P ED ++ D+I
Sbjct: 400 NALLKLETANDEPNLEDGVTLPEEDDAEADEI 431
>AY122183-1|AAM52695.1| 1380|Drosophila melanogaster LD40412p
protein.
Length = 1380
Score = 29.5 bits (63), Expect = 4.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 139 EGTTTSISFVKDKLFPYAEENVKDFLDAQWDDEDVKEAV 255
E S + +L P+ EEN+ +F D Q+D E+ E +
Sbjct: 475 EKLNDEFSSLAPELLPFIEENLTEFPDMQFDKEESDETL 513
>AY060616-1|AAL28164.1| 452|Drosophila melanogaster GH04071p
protein.
Length = 452
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 256 NALRKLAIEDQEKSVEGLVTIPGEDASKEDQI 351
NAL KL + E ++E VT+P ED ++ D+I
Sbjct: 400 NALLKLETANDEPNLEDGVTLPEEDDAEADEI 431
>AE014297-4410|AAF56915.1| 1380|Drosophila melanogaster CG1911-PA
protein.
Length = 1380
Score = 29.5 bits (63), Expect = 4.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 139 EGTTTSISFVKDKLFPYAEENVKDFLDAQWDDEDVKEAV 255
E S + +L P+ EEN+ +F D Q+D E+ E +
Sbjct: 475 EKLNDEFSSLAPELLPFIEENLTEFPDMQFDKEESDETL 513
>AE014297-1076|AAF54482.2| 452|Drosophila melanogaster CG3910-PA
protein.
Length = 452
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 256 NALRKLAIEDQEKSVEGLVTIPGEDASKEDQI 351
NAL KL + E ++E VT+P ED ++ D+I
Sbjct: 400 NALLKLETANDEPNLEDGVTLPEEDDAEADEI 431
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,198,961
Number of Sequences: 53049
Number of extensions: 707046
Number of successful extensions: 1775
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1769
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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