Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0176
         (648 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              23   3.4  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              22   4.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.4  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   7.8  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   7.8  

>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 613 NNAKVITLRNPRVDKAKRK*CVEKYKSI 530
           ++   I+  NP +  +K   CV KYK++
Sbjct: 102 SDCSTISEENPHLKASKLVQCVSKYKTM 129


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 461 LISSFDGFDNSINFN 505
           LI  F+G+D+  NFN
Sbjct: 66  LIKKFNGYDDGGNFN 80


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 293 KIARTEEYEIFTLIENIEKKCTMLIFFSNN 204
           KI   ++ EI  LI+NI ++    +  SNN
Sbjct: 346 KIVHEKQQEITGLIQNIIQEMKNDVLLSNN 375


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 293 KIARTEEYEIFTLIENIEKKCTMLIFFSNN 204
           KI   ++ EI  LI+NI ++    +  SNN
Sbjct: 384 KIVHEKQQEITGLIQNIIQEMKNDVLLSNN 413


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -3

Query: 550 VEKYKSICEKFIIQTI-KVYAIIKSI 476
           VE+Y +IC  FI  T+ K+   +K I
Sbjct: 150 VERYIAICHPFISHTMSKLSRAVKFI 175


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 320 SKNFVSLFTKIARTEEYEIFTL 255
           S N    FT+IA     E++TL
Sbjct: 570 SNNMTDSFTRIANNTIQELYTL 591


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,615
Number of Sequences: 438
Number of extensions: 3074
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)