Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0170
         (756 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase ...    25   1.9  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   4.4  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          23   7.7  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          23   7.7  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          23   7.7  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   7.7  

>CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase
           protein.
          Length = 562

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 53  TRSPSISAPHFWTNNRSLTYHPYKSKKLRNA 145
           TR+P    PHFW            S+ +RNA
Sbjct: 355 TRNPDYFVPHFWNIPHGTAASAAVSQGIRNA 385


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -3

Query: 586 SSGVKTAL--SAGVFNSTFVDCVTSAAWRELWK 494
           ++ VK A+    GVF + + DC+ +  +   WK
Sbjct: 438 NAAVKAAILEHTGVFTALYQDCLVNGTFPAAWK 470


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 304 EGRALPHAVFQLHTSAR 254
           EG ALPHA+ +L  + R
Sbjct: 168 EGYALPHAILRLDLAGR 184


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 304 EGRALPHAVFQLHTSAR 254
           EG ALPHA+ +L  + R
Sbjct: 168 EGYALPHAILRLDLAGR 184


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 304 EGRALPHAVFQLHTSAR 254
           EG ALPHA+ +L  + R
Sbjct: 168 EGYALPHAILRLDLAGR 184


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -3

Query: 586 SSGVKTALSA--GVFNSTFVDCVTSAAWRELWK 494
           ++ VK A+    GVF   + DC+ +  + + WK
Sbjct: 460 NAAVKVAIEKYPGVFCRVYQDCLNTGTFPQQWK 492


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 810,758
Number of Sequences: 2352
Number of extensions: 17670
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)