Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0170
(756 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28729-6|AAA68292.1| 549|Caenorhabditis elegans Phosphodiestera... 144 8e-35
U28729-5|AAO38607.1| 674|Caenorhabditis elegans Phosphodiestera... 144 8e-35
U28729-4|AAN60496.1| 599|Caenorhabditis elegans Phosphodiestera... 144 8e-35
U28729-3|AAO38608.1| 612|Caenorhabditis elegans Phosphodiestera... 144 8e-35
U28729-2|AAK77625.1| 626|Caenorhabditis elegans Phosphodiestera... 144 8e-35
U28729-1|ABB88209.1| 673|Caenorhabditis elegans Phosphodiestera... 144 8e-35
AC024877-4|ABQ13047.1| 697|Caenorhabditis elegans Phosphodieste... 104 8e-23
AC024877-3|AAF60898.1| 760|Caenorhabditis elegans Phosphodieste... 104 8e-23
Z81114-3|CAB03289.1| 664|Caenorhabditis elegans Hypothetical pr... 100 1e-21
Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z93376-1|CAB07570.3| 472|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical pr... 70 2e-12
AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical... 70 2e-12
AL132949-41|CAC35868.2| 472|Caenorhabditis elegans Hypothetical... 70 2e-12
Z12017-7|CAH19088.1| 856|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z12017-6|CAE47469.1| 734|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z12017-5|CAA78052.2| 859|Caenorhabditis elegans Hypothetical pr... 67 1e-11
U80032-1|AAB53879.2| 568|Caenorhabditis elegans Phosphodiestera... 54 1e-07
U88165-7|AAK21397.1| 231|Caenorhabditis elegans Sperm specific ... 35 0.072
U67949-6|AAB07559.2| 214|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical p... 28 8.2
Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical p... 28 8.2
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 8.2
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 28 8.2
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 28 8.2
>U28729-6|AAA68292.1| 549|Caenorhabditis elegans Phosphodiesterase
protein 4, isoforma protein.
Length = 549
Score = 144 bits (348), Expect = 8e-35
Identities = 65/93 (69%), Positives = 78/93 (83%)
Frame = +3
Query: 471 EHYIRDNPFHNSLHAADVTQSTNVLLNTPALNAVFTPLEVCAALFAACVHDVDHPGLTNQ 650
EH+ R+N +HN +HAADV QS +VLL +P L VFT LEV AA+FA VHDVDHPG TNQ
Sbjct: 273 EHHYRNNHYHNFIHAADVAQSMHVLLMSPVLTEVFTDLEVLAAIFAGAVHDVDHPGFTNQ 332
Query: 651 FLVNSSSELALMYNDESVLENHHLAVAFKLLQN 749
+L+NS++ELA+MYNDESVLE HHLAVAFKLLQ+
Sbjct: 333 YLINSNNELAIMYNDESVLEQHHLAVAFKLLQD 365
Score = 87.8 bits (208), Expect = 7e-18
Identities = 54/160 (33%), Positives = 82/160 (51%), Gaps = 5/160 (3%)
Frame = +1
Query: 4 MLNKELSHFSDSSKSGNQISEYICSTFLDKQQELDLPSLQVEETSERGAKKKEKPR---- 171
MLNKELSHF++SSKSG Q+S+++ +T++DK++ D PS+++E +E P
Sbjct: 120 MLNKELSHFAESSKSGTQVSKFLITTYMDKEE--DEPSIEIEVPTEVQGPSTSGPMTLSI 177
Query: 172 -HGGPATTMSQISGVKRTLTHTNSFTGERVPRYGVETPHXXXXXXXXXXXDRWGVDIFRI 348
M++ISGV++ S G VP YGV D WG D+F+I
Sbjct: 178 LKKAQTAAMNKISGVRK--LRAPSHDG-HVPEYGVNCAR--EIAVHMQRLDDWGPDVFKI 232
Query: 349 GDLSCGRPLTAVAYTAFTSRELLTTLQIPARTFLAFAVTL 468
+LS LT V ++ R L T +I T + + + L
Sbjct: 233 DELSKNHSLTVVTFSLLRQRNLFKTFEIHQSTLVTYLLNL 272
>U28729-5|AAO38607.1| 674|Caenorhabditis elegans Phosphodiesterase
protein 4, isoformd protein.
Length = 674
Score = 144 bits (348), Expect = 8e-35
Identities = 65/93 (69%), Positives = 78/93 (83%)
Frame = +3
Query: 471 EHYIRDNPFHNSLHAADVTQSTNVLLNTPALNAVFTPLEVCAALFAACVHDVDHPGLTNQ 650
EH+ R+N +HN +HAADV QS +VLL +P L VFT LEV AA+FA VHDVDHPG TNQ
Sbjct: 398 EHHYRNNHYHNFIHAADVAQSMHVLLMSPVLTEVFTDLEVLAAIFAGAVHDVDHPGFTNQ 457
Query: 651 FLVNSSSELALMYNDESVLENHHLAVAFKLLQN 749
+L+NS++ELA+MYNDESVLE HHLAVAFKLLQ+
Sbjct: 458 YLINSNNELAIMYNDESVLEQHHLAVAFKLLQD 490
Score = 87.8 bits (208), Expect = 7e-18
Identities = 54/160 (33%), Positives = 82/160 (51%), Gaps = 5/160 (3%)
Frame = +1
Query: 4 MLNKELSHFSDSSKSGNQISEYICSTFLDKQQELDLPSLQVEETSERGAKKKEKPR---- 171
MLNKELSHF++SSKSG Q+S+++ +T++DK++ D PS+++E +E P
Sbjct: 245 MLNKELSHFAESSKSGTQVSKFLITTYMDKEE--DEPSIEIEVPTEVQGPSTSGPMTLSI 302
Query: 172 -HGGPATTMSQISGVKRTLTHTNSFTGERVPRYGVETPHXXXXXXXXXXXDRWGVDIFRI 348
M++ISGV++ S G VP YGV D WG D+F+I
Sbjct: 303 LKKAQTAAMNKISGVRK--LRAPSHDG-HVPEYGVNCAR--EIAVHMQRLDDWGPDVFKI 357
Query: 349 GDLSCGRPLTAVAYTAFTSRELLTTLQIPARTFLAFAVTL 468
+LS LT V ++ R L T +I T + + + L
Sbjct: 358 DELSKNHSLTVVTFSLLRQRNLFKTFEIHQSTLVTYLLNL 397
>U28729-4|AAN60496.1| 599|Caenorhabditis elegans Phosphodiesterase
protein 4, isoformc protein.
Length = 599
Score = 144 bits (348), Expect = 8e-35
Identities = 65/93 (69%), Positives = 78/93 (83%)
Frame = +3
Query: 471 EHYIRDNPFHNSLHAADVTQSTNVLLNTPALNAVFTPLEVCAALFAACVHDVDHPGLTNQ 650
EH+ R+N +HN +HAADV QS +VLL +P L VFT LEV AA+FA VHDVDHPG TNQ
Sbjct: 323 EHHYRNNHYHNFIHAADVAQSMHVLLMSPVLTEVFTDLEVLAAIFAGAVHDVDHPGFTNQ 382
Query: 651 FLVNSSSELALMYNDESVLENHHLAVAFKLLQN 749
+L+NS++ELA+MYNDESVLE HHLAVAFKLLQ+
Sbjct: 383 YLINSNNELAIMYNDESVLEQHHLAVAFKLLQD 415
Score = 87.8 bits (208), Expect = 7e-18
Identities = 54/160 (33%), Positives = 82/160 (51%), Gaps = 5/160 (3%)
Frame = +1
Query: 4 MLNKELSHFSDSSKSGNQISEYICSTFLDKQQELDLPSLQVEETSERGAKKKEKPR---- 171
MLNKELSHF++SSKSG Q+S+++ +T++DK++ D PS+++E +E P
Sbjct: 170 MLNKELSHFAESSKSGTQVSKFLITTYMDKEE--DEPSIEIEVPTEVQGPSTSGPMTLSI 227
Query: 172 -HGGPATTMSQISGVKRTLTHTNSFTGERVPRYGVETPHXXXXXXXXXXXDRWGVDIFRI 348
M++ISGV++ S G VP YGV D WG D+F+I
Sbjct: 228 LKKAQTAAMNKISGVRK--LRAPSHDG-HVPEYGVNCAR--EIAVHMQRLDDWGPDVFKI 282
Query: 349 GDLSCGRPLTAVAYTAFTSRELLTTLQIPARTFLAFAVTL 468
+LS LT V ++ R L T +I T + + + L
Sbjct: 283 DELSKNHSLTVVTFSLLRQRNLFKTFEIHQSTLVTYLLNL 322
>U28729-3|AAO38608.1| 612|Caenorhabditis elegans Phosphodiesterase
protein 4, isoforme protein.
Length = 612
Score = 144 bits (348), Expect = 8e-35
Identities = 65/93 (69%), Positives = 78/93 (83%)
Frame = +3
Query: 471 EHYIRDNPFHNSLHAADVTQSTNVLLNTPALNAVFTPLEVCAALFAACVHDVDHPGLTNQ 650
EH+ R+N +HN +HAADV QS +VLL +P L VFT LEV AA+FA VHDVDHPG TNQ
Sbjct: 336 EHHYRNNHYHNFIHAADVAQSMHVLLMSPVLTEVFTDLEVLAAIFAGAVHDVDHPGFTNQ 395
Query: 651 FLVNSSSELALMYNDESVLENHHLAVAFKLLQN 749
+L+NS++ELA+MYNDESVLE HHLAVAFKLLQ+
Sbjct: 396 YLINSNNELAIMYNDESVLEQHHLAVAFKLLQD 428
Score = 87.8 bits (208), Expect = 7e-18
Identities = 54/160 (33%), Positives = 82/160 (51%), Gaps = 5/160 (3%)
Frame = +1
Query: 4 MLNKELSHFSDSSKSGNQISEYICSTFLDKQQELDLPSLQVEETSERGAKKKEKPR---- 171
MLNKELSHF++SSKSG Q+S+++ +T++DK++ D PS+++E +E P
Sbjct: 183 MLNKELSHFAESSKSGTQVSKFLITTYMDKEE--DEPSIEIEVPTEVQGPSTSGPMTLSI 240
Query: 172 -HGGPATTMSQISGVKRTLTHTNSFTGERVPRYGVETPHXXXXXXXXXXXDRWGVDIFRI 348
M++ISGV++ S G VP YGV D WG D+F+I
Sbjct: 241 LKKAQTAAMNKISGVRK--LRAPSHDG-HVPEYGVNCAR--EIAVHMQRLDDWGPDVFKI 295
Query: 349 GDLSCGRPLTAVAYTAFTSRELLTTLQIPARTFLAFAVTL 468
+LS LT V ++ R L T +I T + + + L
Sbjct: 296 DELSKNHSLTVVTFSLLRQRNLFKTFEIHQSTLVTYLLNL 335
>U28729-2|AAK77625.1| 626|Caenorhabditis elegans Phosphodiesterase
protein 4, isoformb protein.
Length = 626
Score = 144 bits (348), Expect = 8e-35
Identities = 65/93 (69%), Positives = 78/93 (83%)
Frame = +3
Query: 471 EHYIRDNPFHNSLHAADVTQSTNVLLNTPALNAVFTPLEVCAALFAACVHDVDHPGLTNQ 650
EH+ R+N +HN +HAADV QS +VLL +P L VFT LEV AA+FA VHDVDHPG TNQ
Sbjct: 350 EHHYRNNHYHNFIHAADVAQSMHVLLMSPVLTEVFTDLEVLAAIFAGAVHDVDHPGFTNQ 409
Query: 651 FLVNSSSELALMYNDESVLENHHLAVAFKLLQN 749
+L+NS++ELA+MYNDESVLE HHLAVAFKLLQ+
Sbjct: 410 YLINSNNELAIMYNDESVLEQHHLAVAFKLLQD 442
Score = 87.8 bits (208), Expect = 7e-18
Identities = 54/160 (33%), Positives = 82/160 (51%), Gaps = 5/160 (3%)
Frame = +1
Query: 4 MLNKELSHFSDSSKSGNQISEYICSTFLDKQQELDLPSLQVEETSERGAKKKEKPR---- 171
MLNKELSHF++SSKSG Q+S+++ +T++DK++ D PS+++E +E P
Sbjct: 197 MLNKELSHFAESSKSGTQVSKFLITTYMDKEE--DEPSIEIEVPTEVQGPSTSGPMTLSI 254
Query: 172 -HGGPATTMSQISGVKRTLTHTNSFTGERVPRYGVETPHXXXXXXXXXXXDRWGVDIFRI 348
M++ISGV++ S G VP YGV D WG D+F+I
Sbjct: 255 LKKAQTAAMNKISGVRK--LRAPSHDG-HVPEYGVNCAR--EIAVHMQRLDDWGPDVFKI 309
Query: 349 GDLSCGRPLTAVAYTAFTSRELLTTLQIPARTFLAFAVTL 468
+LS LT V ++ R L T +I T + + + L
Sbjct: 310 DELSKNHSLTVVTFSLLRQRNLFKTFEIHQSTLVTYLLNL 349
>U28729-1|ABB88209.1| 673|Caenorhabditis elegans Phosphodiesterase
protein 4, isoformg protein.
Length = 673
Score = 144 bits (348), Expect = 8e-35
Identities = 65/93 (69%), Positives = 78/93 (83%)
Frame = +3
Query: 471 EHYIRDNPFHNSLHAADVTQSTNVLLNTPALNAVFTPLEVCAALFAACVHDVDHPGLTNQ 650
EH+ R+N +HN +HAADV QS +VLL +P L VFT LEV AA+FA VHDVDHPG TNQ
Sbjct: 397 EHHYRNNHYHNFIHAADVAQSMHVLLMSPVLTEVFTDLEVLAAIFAGAVHDVDHPGFTNQ 456
Query: 651 FLVNSSSELALMYNDESVLENHHLAVAFKLLQN 749
+L+NS++ELA+MYNDESVLE HHLAVAFKLLQ+
Sbjct: 457 YLINSNNELAIMYNDESVLEQHHLAVAFKLLQD 489
Score = 87.8 bits (208), Expect = 7e-18
Identities = 54/160 (33%), Positives = 82/160 (51%), Gaps = 5/160 (3%)
Frame = +1
Query: 4 MLNKELSHFSDSSKSGNQISEYICSTFLDKQQELDLPSLQVEETSERGAKKKEKPR---- 171
MLNKELSHF++SSKSG Q+S+++ +T++DK++ D PS+++E +E P
Sbjct: 244 MLNKELSHFAESSKSGTQVSKFLITTYMDKEE--DEPSIEIEVPTEVQGPSTSGPMTLSI 301
Query: 172 -HGGPATTMSQISGVKRTLTHTNSFTGERVPRYGVETPHXXXXXXXXXXXDRWGVDIFRI 348
M++ISGV++ S G VP YGV D WG D+F+I
Sbjct: 302 LKKAQTAAMNKISGVRK--LRAPSHDG-HVPEYGVNCAR--EIAVHMQRLDDWGPDVFKI 356
Query: 349 GDLSCGRPLTAVAYTAFTSRELLTTLQIPARTFLAFAVTL 468
+LS LT V ++ R L T +I T + + + L
Sbjct: 357 DELSKNHSLTVVTFSLLRQRNLFKTFEIHQSTLVTYLLNL 396
>AC024877-4|ABQ13047.1| 697|Caenorhabditis elegans
Phosphodiesterase protein 6, isoformb protein.
Length = 697
Score = 104 bits (249), Expect = 8e-23
Identities = 44/92 (47%), Positives = 64/92 (69%)
Frame = +3
Query: 465 LKEHYIRDNPFHNSLHAADVTQSTNVLLNTPALNAVFTPLEVCAALFAACVHDVDHPGLT 644
++ HY N +HN+ HAADV Q+T+ L++P++ AAL AA VHD+DHPG
Sbjct: 491 IEAHYHAGNTYHNATHAADVLQATSFFLDSPSVAVHVNESHAVAALLAAAVHDLDHPGRG 550
Query: 645 NQFLVNSSSELALMYNDESVLENHHLAVAFKL 740
N +L+N+ LA++YND S+LENHH+A+AF+L
Sbjct: 551 NAYLINTRQSLAILYNDNSILENHHIALAFQL 582
>AC024877-3|AAF60898.1| 760|Caenorhabditis elegans
Phosphodiesterase protein 6, isoforma protein.
Length = 760
Score = 104 bits (249), Expect = 8e-23
Identities = 44/92 (47%), Positives = 64/92 (69%)
Frame = +3
Query: 465 LKEHYIRDNPFHNSLHAADVTQSTNVLLNTPALNAVFTPLEVCAALFAACVHDVDHPGLT 644
++ HY N +HN+ HAADV Q+T+ L++P++ AAL AA VHD+DHPG
Sbjct: 491 IEAHYHAGNTYHNATHAADVLQATSFFLDSPSVAVHVNESHAVAALLAAAVHDLDHPGRG 550
Query: 645 NQFLVNSSSELALMYNDESVLENHHLAVAFKL 740
N +L+N+ LA++YND S+LENHH+A+AF+L
Sbjct: 551 NAYLINTRQSLAILYNDNSILENHHIALAFQL 582
>Z81114-3|CAB03289.1| 664|Caenorhabditis elegans Hypothetical
protein T04D3.3 protein.
Length = 664
Score = 100 bits (239), Expect = 1e-21
Identities = 43/89 (48%), Positives = 62/89 (69%)
Frame = +3
Query: 486 DNPFHNSLHAADVTQSTNVLLNTPALNAVFTPLEVCAALFAACVHDVDHPGLTNQFLVNS 665
+NP+HN +HAADVTQS++ +L+ L LE+ A LF A +HD +H G TN F + S
Sbjct: 329 NNPYHNVVHAADVTQSSHFMLSQTGLANSLGDLELLAVLFGALIHDYEHTGHTNNFHIQS 388
Query: 666 SSELALMYNDESVLENHHLAVAFKLLQND 752
S+ A++YND SVLENHH++ F+L++ D
Sbjct: 389 QSQFAMLYNDRSVLENHHVSSCFRLMKED 417
>Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 70.1 bits (164), Expect = 2e-12
Identities = 38/96 (39%), Positives = 51/96 (53%)
Frame = +3
Query: 456 CSYLKEHYIRDNPFHNSLHAADVTQSTNVLLNTPALNAVFTPLEVCAALFAACVHDVDHP 635
C YL H +R F V + ++ + + LE+ A AA +HD DHP
Sbjct: 268 CYYLSAHPVRST-FLTPKTPDSVLTPPHPHHQHSSIMSQLSTLELMALFTAAAMHDYDHP 326
Query: 636 GLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLL 743
G TN FLV + A++YND SVLENHH A ++KLL
Sbjct: 327 GRTNAFLVQVEDKKAILYNDRSVLENHHAAESWKLL 362
>Z93376-1|CAB07570.3| 472|Caenorhabditis elegans Hypothetical
protein E01F3.1a protein.
Length = 472
Score = 70.1 bits (164), Expect = 2e-12
Identities = 38/96 (39%), Positives = 51/96 (53%)
Frame = +3
Query: 456 CSYLKEHYIRDNPFHNSLHAADVTQSTNVLLNTPALNAVFTPLEVCAALFAACVHDVDHP 635
C YL H +R F V + ++ + + LE+ A AA +HD DHP
Sbjct: 147 CYYLSAHPVRST-FLTPKTPDSVLTPPHPHHQHSSIMSQLSTLELMALFTAAAMHDYDHP 205
Query: 636 GLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLL 743
G TN FLV + A++YND SVLENHH A ++KLL
Sbjct: 206 GRTNAFLVQVEDKKAILYNDRSVLENHHAAESWKLL 241
>Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 70.1 bits (164), Expect = 2e-12
Identities = 38/96 (39%), Positives = 51/96 (53%)
Frame = +3
Query: 456 CSYLKEHYIRDNPFHNSLHAADVTQSTNVLLNTPALNAVFTPLEVCAALFAACVHDVDHP 635
C YL H +R F V + ++ + + LE+ A AA +HD DHP
Sbjct: 268 CYYLSAHPVRST-FLTPKTPDSVLTPPHPHHQHSSIMSQLSTLELMALFTAAAMHDYDHP 326
Query: 636 GLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLL 743
G TN FLV + A++YND SVLENHH A ++KLL
Sbjct: 327 GRTNAFLVQVEDKKAILYNDRSVLENHHAAESWKLL 362
>AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 70.1 bits (164), Expect = 2e-12
Identities = 38/96 (39%), Positives = 51/96 (53%)
Frame = +3
Query: 456 CSYLKEHYIRDNPFHNSLHAADVTQSTNVLLNTPALNAVFTPLEVCAALFAACVHDVDHP 635
C YL H +R F V + ++ + + LE+ A AA +HD DHP
Sbjct: 268 CYYLSAHPVRST-FLTPKTPDSVLTPPHPHHQHSSIMSQLSTLELMALFTAAAMHDYDHP 326
Query: 636 GLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLL 743
G TN FLV + A++YND SVLENHH A ++KLL
Sbjct: 327 GRTNAFLVQVEDKKAILYNDRSVLENHHAAESWKLL 362
>AL132949-41|CAC35868.2| 472|Caenorhabditis elegans Hypothetical
protein E01F3.1a protein.
Length = 472
Score = 70.1 bits (164), Expect = 2e-12
Identities = 38/96 (39%), Positives = 51/96 (53%)
Frame = +3
Query: 456 CSYLKEHYIRDNPFHNSLHAADVTQSTNVLLNTPALNAVFTPLEVCAALFAACVHDVDHP 635
C YL H +R F V + ++ + + LE+ A AA +HD DHP
Sbjct: 147 CYYLSAHPVRST-FLTPKTPDSVLTPPHPHHQHSSIMSQLSTLELMALFTAAAMHDYDHP 205
Query: 636 GLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLL 743
G TN FLV + A++YND SVLENHH A ++KLL
Sbjct: 206 GRTNAFLVQVEDKKAILYNDRSVLENHHAAESWKLL 241
>Z12017-7|CAH19088.1| 856|Caenorhabditis elegans Hypothetical
protein R08D7.6c protein.
Length = 856
Score = 67.3 bits (157), Expect = 1e-11
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +3
Query: 483 RDNPFHNSLHAADVTQSTNVLLNTPALNAVFTPLEVCAALFAACVHDVDHPGLTNQFLVN 662
R P+HN HA VT + L T A+ + +E + L A HD+DH G TN F +
Sbjct: 414 RPVPYHNWSHAFAVTHFCWLTLRTDAIRRALSDMERLSLLIACLCHDIDHRGTTNSFQMQ 473
Query: 663 S--SSELALMYNDE-SVLENHHLAVAFKLLQND 752
S + L+++Y+ E SVLE HH A KLLQ +
Sbjct: 474 SLQKTPLSVLYSTEGSVLERHHFAQTIKLLQQE 506
>Z12017-6|CAE47469.1| 734|Caenorhabditis elegans Hypothetical
protein R08D7.6b protein.
Length = 734
Score = 67.3 bits (157), Expect = 1e-11
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +3
Query: 483 RDNPFHNSLHAADVTQSTNVLLNTPALNAVFTPLEVCAALFAACVHDVDHPGLTNQFLVN 662
R P+HN HA VT + L T A+ + +E + L A HD+DH G TN F +
Sbjct: 417 RPVPYHNWSHAFAVTHFCWLTLRTDAIRRALSDMERLSLLIACLCHDIDHRGTTNSFQMQ 476
Query: 663 S--SSELALMYNDE-SVLENHHLAVAFKLLQND 752
S + L+++Y+ E SVLE HH A KLLQ +
Sbjct: 477 SLQKTPLSVLYSTEGSVLERHHFAQTIKLLQQE 509
>Z12017-5|CAA78052.2| 859|Caenorhabditis elegans Hypothetical
protein R08D7.6a protein.
Length = 859
Score = 67.3 bits (157), Expect = 1e-11
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +3
Query: 483 RDNPFHNSLHAADVTQSTNVLLNTPALNAVFTPLEVCAALFAACVHDVDHPGLTNQFLVN 662
R P+HN HA VT + L T A+ + +E + L A HD+DH G TN F +
Sbjct: 417 RPVPYHNWSHAFAVTHFCWLTLRTDAIRRALSDMERLSLLIACLCHDIDHRGTTNSFQMQ 476
Query: 663 S--SSELALMYNDE-SVLENHHLAVAFKLLQND 752
S + L+++Y+ E SVLE HH A KLLQ +
Sbjct: 477 SLQKTPLSVLYSTEGSVLERHHFAQTIKLLQQE 509
>U80032-1|AAB53879.2| 568|Caenorhabditis elegans Phosphodiesterase
protein 5 protein.
Length = 568
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +3
Query: 495 FHNSLHAADVTQST-NVLLNTPALNAVFTPLEVCAALFAACVHDVDHPGLTNQFLVNSSS 671
+HN H V + L+N+P FT LE A + HD+DH G N ++ S+
Sbjct: 342 YHNWAHGWSVAHAMFATLMNSPD---AFTKLEALALYVSCLCHDLDHRGKNNAYMKTMST 398
Query: 672 ELALMYNDESVLENHHLAVAFKLLQNDG 755
LA +Y+ SV+E HH +LQ DG
Sbjct: 399 PLASIYS-TSVMERHHFNQTVTILQQDG 425
>U88165-7|AAK21397.1| 231|Caenorhabditis elegans Sperm specific
transcript protein20 protein.
Length = 231
Score = 34.7 bits (76), Expect = 0.072
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +1
Query: 91 KQQELDLPSLQVEETSERGAKKKEKPRHGGPATTMSQISGVK-RTLTHTNS 240
++ L+LP L ++T + G KKEKP+ P+T+MS I K R + +NS
Sbjct: 123 RKTALNLPCLD-KKTKKAGDAKKEKPKMKAPSTSMSDIEKSKSRAASKSNS 172
>U67949-6|AAB07559.2| 214|Caenorhabditis elegans Hypothetical
protein F55A4.1 protein.
Length = 214
Score = 33.5 bits (73), Expect = 0.17
Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 5/120 (4%)
Frame = +3
Query: 411 AVDYSSDTGAYFLGVCSYLKEHYIRDNPFHNSLHAADVTQSTNVL--LNTPALNAVFTPL 584
A Y SD G FL S E +R P+H + Q+ N A+N V L
Sbjct: 84 AFQYLSDIGQEFLNENSSRIEQVVR--PYHFLEFDKYIQQAKQRYGDTNKHAMNTVSNEL 141
Query: 585 EVCAALFAACVHDVDHPGLTNQFLVNSSSELALM---YNDESVLENHHLAVAFKLLQNDG 755
+ + + DV H G L N +SEL+ M Y D++ N + FK+ + G
Sbjct: 142 QDVTRIMVTNIEDVIHRGEALNILENRASELSGMSKKYRDDAKALNRRSTI-FKVAASIG 200
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +2
Query: 14 RS*ATSQIPASPATRSPSISAPHFWTNNRSLTYHPYKSKK 133
R A+S+ P P + PS SAPH NNR+ Y+P K
Sbjct: 165 REPASSRRPYPPQ-QPPSTSAPHSSPNNRTSLYNPQPPPK 203
>Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 80 HFWTNNRSLTYHPYKSKKLR--NAAPR-KRKNHVMADQRLRCHKYR 208
HFW S T+H Y K + P + K+ MAD++L C KYR
Sbjct: 863 HFWAAPPSQTHHNYGKHKDSDGDGVPDIEDKDAAMADRKLSC-KYR 907
>Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 80 HFWTNNRSLTYHPYKSKKLR--NAAPR-KRKNHVMADQRLRCHKYR 208
HFW S T+H Y K + P + K+ MAD++L C KYR
Sbjct: 861 HFWAAPPSQTHHNYGKHKDSDGDGVPDIEDKDAAMADRKLSC-KYR 905
>Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 80 HFWTNNRSLTYHPYKSKKLR--NAAPR-KRKNHVMADQRLRCHKYR 208
HFW S T+H Y K + P + K+ MAD++L C KYR
Sbjct: 863 HFWAAPPSQTHHNYGKHKDSDGDGVPDIEDKDAAMADRKLSC-KYR 907
>Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 80 HFWTNNRSLTYHPYKSKKLR--NAAPR-KRKNHVMADQRLRCHKYR 208
HFW S T+H Y K + P + K+ MAD++L C KYR
Sbjct: 861 HFWAAPPSQTHHNYGKHKDSDGDGVPDIEDKDAAMADRKLSC-KYR 905
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +2
Query: 614 RPRCRSPGPHQSIPRQLQFRTRTNVQRRVSPREPPPCSRIQA 739
RP R PG S P++ +R + PRE P ++++
Sbjct: 224 RPSSRGPGSRPSSPKKSMKSREGTPKRTLKPREGSPSKKLRS 265
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +2
Query: 614 RPRCRSPGPHQSIPRQLQFRTRTNVQRRVSPREPPPCSRIQA 739
RP R PG S P++ +R + PRE P ++++
Sbjct: 224 RPSSRGPGSRPSSPKKSMKSREGTPKRTLKPREGSPSKKLRS 265
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +2
Query: 614 RPRCRSPGPHQSIPRQLQFRTRTNVQRRVSPREPPPCSRIQA 739
RP R PG S P++ +R + PRE P ++++
Sbjct: 224 RPSSRGPGSRPSSPKKSMKSREGTPKRTLKPREGSPSKKLRS 265
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +2
Query: 614 RPRCRSPGPHQSIPRQLQFRTRTNVQRRVSPREPPPCSRIQA 739
RP R PG S P++ +R + PRE P ++++
Sbjct: 224 RPSSRGPGSRPSSPKKSMKSREGTPKRTLKPREGSPSKKLRS 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,820,235
Number of Sequences: 27780
Number of extensions: 387960
Number of successful extensions: 1349
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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