Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0169
         (706 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   3.1  
AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    23   9.4  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          23   9.4  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          23   9.4  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          23   9.4  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          23   9.4  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   9.4  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 220 SASLTTYSLPPAECAEP 170
           SA+  T+ LPP EC +P
Sbjct: 27  SANENTHYLPPLECVDP 43


>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 631 YCGSIVKDYHTS 666
           YCG  + D+HTS
Sbjct: 39  YCGKALDDFHTS 50


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 99  NCSSESCDEMMSVLERTITSPGFMGSAHSAGG 194
           N SSES  +M S    T  + G  G+  S+GG
Sbjct: 232 NFSSESNAQMDSTTNTTSNTGGTGGTGTSSGG 263


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 99  NCSSESCDEMMSVLERTITSPGFMGSAHSAGG 194
           N SSES  +M S    T  + G  G+  S+GG
Sbjct: 232 NFSSESNAQMDSTTNTTSNTGGTGGTGTSSGG 263


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 99  NCSSESCDEMMSVLERTITSPGFMGSAHSAGG 194
           N SSES  +M S    T  + G  G+  S+GG
Sbjct: 232 NFSSESNAQMDSTTNTTSNTGGTGGTGTSSGG 263


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 99  NCSSESCDEMMSVLERTITSPGFMGSAHSAGG 194
           N SSES  +M S    T  + G  G+  S+GG
Sbjct: 232 NFSSESNAQMDSTTNTTSNTGGTGGTGTSSGG 263


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +1

Query: 415 LVSIALDISRLKQYTGRDEPTVIT*SYNEKT*HELKLYTQY 537
           L +IAL + RL  +  RDE +V+  S   +  HEL L  +Y
Sbjct: 753 LFNIALVLQRLATFVLRDEKSVL--SVVLQAVHELGLAHKY 791


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,688
Number of Sequences: 2352
Number of extensions: 9207
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)