Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0166
(710 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 65 2e-12
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 64 5e-12
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 61 3e-11
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 61 4e-11
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 58 2e-10
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 58 3e-10
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 58 3e-10
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 57 6e-10
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 57 6e-10
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 53 1e-08
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 53 1e-08
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 50 7e-08
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 50 7e-08
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 50 7e-08
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 46 9e-07
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 40 6e-05
AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse t... 33 0.007
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 30 0.082
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 25 1.8
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 23 7.2
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 23 9.5
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 65.3 bits (152), Expect = 2e-12
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Frame = -1
Query: 326 SLHELKGVLSHVK-DSSPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQE 150
S E++ H+K +PG DGI + + L FL++ + TG P WK Q+
Sbjct: 394 SADEIQKAADHLKLGKAPGPDGIPIEAIKAAIKAYLEAFLSVFQNCFDTGFFPIPWKRQK 453
Query: 149 VIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRLEWFIENNN 12
++ + KP KP +D ++ RP+AL K+ E L+ NRL + E +
Sbjct: 454 LVLLPKPGKPPDDASALRPLALIDNFAKILEILILNRLVVYTEGEH 499
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 63.7 bits (148), Expect = 5e-12
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Frame = -1
Query: 317 ELKGVLSHVKDS-SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEVIA 141
ELK + + + +PG DGI + + F L +V G P WK Q ++
Sbjct: 417 ELKLIARRMANKKAPGLDGIPNAAVKAAILEHTGVFTALYQDCLVNGTFPAAWKRQRLVL 476
Query: 140 IKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRLEWFIEN 18
I KP KP+ SYRP+ + L KV E L+ NRL F+E+
Sbjct: 477 IPKPGKPSGVSCSYRPLCMLDALGKVLERLILNRLHEFLED 517
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 61.3 bits (142), Expect = 3e-11
Identities = 30/88 (34%), Positives = 45/88 (51%)
Frame = -1
Query: 281 SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEVIAIKKPNKPTNDVAS 102
+PG DGI L F ++ G P WK Q ++ ++KP KP + +S
Sbjct: 450 APGLDGIPNIALKTAIKKHTAVFRSIYQGCFDRGEFPAHWKIQRLVLLQKPGKPPGESSS 509
Query: 101 YRPIALSSVLTKVAEHLVKNRLEWFIEN 18
+RP+ + + L KV E L+ NRL F+EN
Sbjct: 510 FRPLGMLNGLGKVLERLILNRLNEFLEN 537
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 60.9 bits (141), Expect = 4e-11
Identities = 31/94 (32%), Positives = 44/94 (46%)
Frame = -1
Query: 293 VKDSSPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEVIAIKKPNKPTN 114
V +PG DGI + + F L + G P WK Q ++ + KP KP
Sbjct: 501 VTRKAPGLDGIPNAAVKVAIEEYTEEFCRLYQDCLSRGTFPPQWKRQRLVLLPKPGKPPG 560
Query: 113 DVASYRPIALSSVLTKVAEHLVKNRLEWFIENNN 12
+ +SYRP+ + L KV E L+ NRL IE +
Sbjct: 561 ESSSYRPLCMLDALGKVLERLILNRLNRHIEQQD 594
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 58.4 bits (135), Expect = 2e-10
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Frame = -1
Query: 332 PFSLHELKGVLSHVK-DSSPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKS 156
P + E+ + + +K +PG DGI + + F N++ + + TG P WK
Sbjct: 453 PITRQEIINLANRLKCGKAPGIDGIPNMAIKAAMLAYPDVFKNVLMNTLTTGQFPSMWKI 512
Query: 155 QEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRLEWFIE 21
Q+++ I KP KP +++RP+ L L KV E ++ +RL + E
Sbjct: 513 QKLVLIPKPGKPPGHPSAFRPLGLVDNLAKVQEMVILDRLTKYTE 557
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 58.0 bits (134), Expect = 3e-10
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Frame = -1
Query: 326 SLHELKGVLSHVKDS-SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQE 150
++ EL+ + S + + +PG DGI + + + F L S + T P WK Q
Sbjct: 481 TIPELRLIASTMPNKKAPGLDGIPNAAVKAAILAYTDVFQALYQSCLETATFPAPWKRQR 540
Query: 149 VIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRLEWFIEN 18
++ + KP KP SYRP+ + L KV E L+ NRL +E+
Sbjct: 541 LVLLPKPGKPPGSNGSYRPLCMLDALGKVLEKLILNRLHNHLED 584
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 58.0 bits (134), Expect = 3e-10
Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Frame = -1
Query: 377 PLEXXXXXXXXXXXSPFSLHELKGVLSHVKDS-----SPGQDGIMYSFLSHLGNSALMYF 213
P+E P S EL L + S +PG D I + + F
Sbjct: 393 PMEWPETEVGGDPQDPVSEEELAEELKEIARSLNPKKAPGDDNIPNMAAAAAILAFPEVF 452
Query: 212 LNLINSVMVTGNIPETWKSQEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRLE 33
++ G P+ WK Q+++ + K KP + +SYRPI L SVL K+ E L++ RL
Sbjct: 453 AKSYKQLLEAGTFPDAWKRQQLVLLTKSGKPPGEPSSYRPICLLSVLGKILERLIQRRLT 512
Query: 32 WFIEN 18
+E+
Sbjct: 513 THLES 517
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 56.8 bits (131), Expect = 6e-10
Identities = 27/88 (30%), Positives = 43/88 (48%)
Frame = -1
Query: 281 SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEVIAIKKPNKPTNDVAS 102
+PG DGI + + F + + G P WK Q ++ + K KP + +S
Sbjct: 444 APGLDGIPNAAVKAAIGMYPDVFCRMYQDCLTRGTFPSEWKRQRLVLLSKTGKPPGESSS 503
Query: 101 YRPIALSSVLTKVAEHLVKNRLEWFIEN 18
YRP+++ L KV E L+ NRL +E+
Sbjct: 504 YRPLSMLDALGKVLEQLILNRLNKHLED 531
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 56.8 bits (131), Expect = 6e-10
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = -1
Query: 317 ELKGVLSHVK-DSSPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEVIA 141
EL+ + +H+ +PG DGI + + F + + TG P+ WK Q ++
Sbjct: 439 ELQEIAAHMAIRKAPGLDGIPNAAVKVAIEKYPGVFCRVYQDCLNTGTFPQQWKRQRLVL 498
Query: 140 IKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNR 39
+ KP K + +SYRP+ + L KV E L+ NR
Sbjct: 499 LPKPGKAPGESSSYRPLCMLDALGKVLERLILNR 532
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 52.8 bits (121), Expect = 1e-08
Identities = 27/90 (30%), Positives = 46/90 (51%)
Frame = -1
Query: 281 SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEVIAIKKPNKPTNDVAS 102
+PG DG+ + L+ + F + + PE WK Q ++ + KP KP D +S
Sbjct: 434 APGLDGVPNAALASAIKNYPGSFRQVYQECLDRSCFPEQWKKQRLVLLPKPGKPPGDPSS 493
Query: 101 YRPIALSSVLTKVAEHLVKNRLEWFIENNN 12
+RPI L + K E L+ +RL +E+++
Sbjct: 494 FRPICLLNNAGKTFERLLLDRLNEHLEDSD 523
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 52.8 bits (121), Expect = 1e-08
Identities = 30/90 (33%), Positives = 40/90 (44%)
Frame = -1
Query: 281 SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEVIAIKKPNKPTNDVAS 102
+PG DGI L +A F + + P+ WK Q ++ I KPNKP + S
Sbjct: 414 APGPDGIPNEALKVGMLTATDAFCRVYQGCLENAKFPDEWKRQRLVLIPKPNKPPGEPGS 473
Query: 101 YRPIALSSVLTKVAEHLVKNRLEWFIENNN 12
RPI L K E ++ RL IE N
Sbjct: 474 VRPICLLDGAGKGLERIIVQRLNAHIEEVN 503
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 50.0 bits (114), Expect = 7e-08
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Frame = -1
Query: 332 PFSLHELKGVLSHVKD-SSPGQDGIMYSFLSHLGNSALMYFLN----LINSVMVTGNIPE 168
P + EL + S + + +PG DGI + + +A+M F L + + P
Sbjct: 472 PVTDDELLLIASQMANHKAPGLDGIPNAAVK----TAIMLFPESSGFLYQDCLNRASFPA 527
Query: 167 TWKSQEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRLEWFIE 21
WK Q ++ + K KP + +SYRP+ + L KV E L+ NRL +E
Sbjct: 528 QWKRQRLVLLPKQGKPPGESSSYRPLCMLDALGKVLERLILNRLNEHLE 576
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 50.0 bits (114), Expect = 7e-08
Identities = 26/88 (29%), Positives = 42/88 (47%)
Frame = -1
Query: 281 SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEVIAIKKPNKPTNDVAS 102
+PG DG+ + L+ F + + P+ WK Q ++ + KP K + +S
Sbjct: 439 APGLDGVPNAALTVALRQQPEPFRRVFQECLDMSCFPQPWKKQRLVLLPKPGKSPGEPSS 498
Query: 101 YRPIALSSVLTKVAEHLVKNRLEWFIEN 18
+RPI L K E L+ NRL +IE+
Sbjct: 499 FRPICLLDNTGKALERLLLNRLNEYIED 526
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 50.0 bits (114), Expect = 7e-08
Identities = 28/88 (31%), Positives = 43/88 (48%)
Frame = -1
Query: 281 SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEVIAIKKPNKPTNDVAS 102
+PG DG+ + L+ F L + P+ WK Q++ I KP KP +S
Sbjct: 436 APGLDGVPNAALTAAIRKHTDIFKKLFQECLDNERFPDEWKKQKLALIPKPGKPPGLASS 495
Query: 101 YRPIALSSVLTKVAEHLVKNRLEWFIEN 18
+RPI L + KV E L+ +R+ IE+
Sbjct: 496 FRPILLLNNPGKVYERLLLSRINDVIED 523
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 46.4 bits (105), Expect = 9e-07
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -1
Query: 278 PGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQE-VIAIKKPNKPTNDVAS 102
PG DGI + L+ F + + TG P+ WK Q V++I KP K + S
Sbjct: 419 PGPDGIPNAALATAMIEEPTIFKKVYQRCLDTGVFPDNWKKQRLVLSIPKPGKRPGESGS 478
Query: 101 YRPIALSSVLTKVAEHLVKNRLEWFIE 21
RPI L + K E ++ +RL IE
Sbjct: 479 SRPICLIDGVAKGLERVILHRLNNHIE 505
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 40.3 bits (90), Expect = 6e-05
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = -1
Query: 302 LSHVKDS-SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEVIAIKKPN 126
L+ +K S +PG DGI + L + L N+ + G P+ W+ ++ I K
Sbjct: 550 LAQLKPSFAPGPDGIPSTVLKRCQTTVAPILAKLFNASLANGYFPKAWRKSWMVPIYKKG 609
Query: 125 KPTNDVASYRPIALSSVLTKVAEHLVKNRL 36
T D +YR I + KV E ++ L
Sbjct: 610 DRT-DAINYRGITSLCAIAKVFELVIYKNL 638
>AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse
transcriptase protein.
Length = 134
Score = 33.5 bits (73), Expect = 0.007
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1
Query: 104 SYRPIALSSVLTKVAEHLVKNRLEWFIENNNFI 6
SYRPI+L S L K+ E L+++R+ NNN I
Sbjct: 1 SYRPISLLSCLGKIFEKLLESRMALHTFNNNII 33
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 29.9 bits (64), Expect = 0.082
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = -1
Query: 305 VLSHVKDS-SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEVIAIKKP 129
VL +K S +PG DGI S L + + + + N + G P WKS + + K
Sbjct: 478 VLFGLKRSFTPGPDGIPASVLINCKDVLAPHLAKIFNLSLSLGVFPALWKSCWLFPVHKK 537
Query: 128 NKPTNDVASYRPIALSSVLTKVAE 57
+ V++YR I + K E
Sbjct: 538 G-CRSIVSNYRGITQTCATAKTFE 560
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 25.4 bits (53), Expect = 1.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -1
Query: 119 TNDVASYRPIALSSVLTKVAEHLVKNRLEWFIENNN 12
T + A YRP+ S L KV ++ +++ + NN
Sbjct: 528 TKNPAKYRPLTCLSNLNKVLSSVITQKVKDHCDTNN 563
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
ion/proton exchanger 3 protein.
Length = 1221
Score = 23.4 bits (48), Expect = 7.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 124 LLGFLIAMTS*DFHVSGILPVTMTEFIKFKKYIK 225
++ +L + + FH+SGIL +T I K Y++
Sbjct: 482 VMAYLAYLNAEIFHMSGILAITFCG-ITMKNYVE 514
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 23.0 bits (47), Expect = 9.5
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +2
Query: 263 YHPDLEMNL*HVKAHLLIHVVKK 331
Y P +++ H+++HLL+H +K
Sbjct: 359 YCPYASISMRHLESHLLLHTDQK 381
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,916
Number of Sequences: 2352
Number of extensions: 12236
Number of successful extensions: 37
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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