Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0166
(710 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 99 5e-21
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 76 5e-14
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 76 5e-14
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 75 1e-13
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 75 1e-13
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 75 1e-13
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 75 1e-13
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 75 1e-13
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 75 1e-13
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 75 1e-13
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 70 4e-12
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 66 3e-11
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 66 4e-11
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 66 4e-11
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 66 4e-11
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 66 4e-11
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 66 6e-11
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 66 6e-11
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 64 2e-10
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 64 2e-10
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 62 1e-09
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 58 9e-09
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 48 2e-05
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 44 2e-04
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 44 3e-04
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 35 0.13
X04513-1|CAA28197.1| 430|Drosophila melanogaster protein ( Dros... 29 6.2
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 99.1 bits (236), Expect = 5e-21
Identities = 44/109 (40%), Positives = 65/109 (59%)
Frame = -1
Query: 329 FSLHELKGVLSHVKDSSPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQE 150
F+L E++ ++ K SPG D + Y L +L L++ N ++ TG P TW+S
Sbjct: 437 FTLLEIENSVAKAKGKSPGADRVSYPMLKNLSPHLKTKLLDIFNQILTTGKYPHTWRSAI 496
Query: 149 VIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIA 3
+I I KPNKP +D+ SYRPI+L S L K E ++ RL WFI+ +N I+
Sbjct: 497 IIPISKPNKPPSDINSYRPISLLSCLGKTLEKIIAQRLTWFIKRHNLIS 545
Score = 34.7 bits (76), Expect = 0.13
Identities = 16/74 (21%), Positives = 33/74 (44%)
Frame = -1
Query: 710 PWWDRECMDAVSKRKVAERVYAEDMSNENLDILNEVICITRKFLRDKKQEGWKTFCTSLS 531
PWW+ +++ Y + ++ NL + + +K + K+ + F + +S
Sbjct: 290 PWWNANLQQLRDQKQRLFSSYKANTNDTNLIRYKKANALFKKAVLSAKRNSLEKFTSKIS 349
Query: 530 PSTCPTEVWRSIKR 489
P + +VW IKR
Sbjct: 350 PVSSTKKVWSDIKR 363
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 75.8 bits (178), Expect = 5e-14
Identities = 37/90 (41%), Positives = 55/90 (61%)
Frame = -1
Query: 281 SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEVIAIKKPNKPTNDVAS 102
SPG DGI L +L SA+ + +N+ N + G P WK +++ I KP KP ++ S
Sbjct: 478 SPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNPES 537
Query: 101 YRPIALSSVLTKVAEHLVKNRLEWFIENNN 12
YRPI+L S L+K+ E L+K RL F++ +N
Sbjct: 538 YRPISLLSGLSKILEKLIKLRLVKFLDIHN 567
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 75.8 bits (178), Expect = 5e-14
Identities = 37/90 (41%), Positives = 55/90 (61%)
Frame = -1
Query: 281 SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEVIAIKKPNKPTNDVAS 102
SPG DGI L +L SA+ + +N+ N + G P WK +++ I KP KP ++ S
Sbjct: 426 SPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNPES 485
Query: 101 YRPIALSSVLTKVAEHLVKNRLEWFIENNN 12
YRPI+L S L+K+ E L+K RL F++ +N
Sbjct: 486 YRPISLLSGLSKILEKLIKLRLVKFLDIHN 515
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 74.9 bits (176), Expect = 1e-13
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = -1
Query: 332 PFSLHELKGVLSHVKDS-SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKS 156
P +L EL + ++K+S +PG+D I + L A +Y + + NS++ G PE WK
Sbjct: 480 PITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKH 539
Query: 155 QEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRL 36
+V I KP K N+ SYRPI+L S L+K+ E L+ RL
Sbjct: 540 AQVKMILKPGKSANEPRSYRPISLLSGLSKIFERLLLKRL 579
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 74.9 bits (176), Expect = 1e-13
Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Frame = -1
Query: 332 PFSLHELKGVLSHVKDS-SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKS 156
P +L+EL + ++K+S +PG+D I + L A +Y + + NS++ G PE WK
Sbjct: 492 PITLNELNEEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKH 551
Query: 155 QEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRL 36
+V I KP K +N+ SYRPI+L S L+K+ E L+ RL
Sbjct: 552 AQVKMILKPGKSSNEPKSYRPISLLSGLSKMFERLLLKRL 591
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 74.5 bits (175), Expect = 1e-13
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = -1
Query: 332 PFSLHELKGVLSHVKDS-SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKS 156
P +L EL + ++K+S +PG+D I + L A +Y + + NS++ G P+ WK
Sbjct: 364 PITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKH 423
Query: 155 QEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRL 36
+V I KP K ND SYRPI+L S L+K+ E L+ RL
Sbjct: 424 AQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRL 463
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 74.5 bits (175), Expect = 1e-13
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = -1
Query: 332 PFSLHELKGVLSHVKDS-SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKS 156
P +L EL + ++K+S +PG+D I + L A +Y + + NS++ G P+ WK
Sbjct: 480 PITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKH 539
Query: 155 QEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRL 36
+V I KP K ND SYRPI+L S L+K+ E L+ RL
Sbjct: 540 AQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRL 579
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 74.5 bits (175), Expect = 1e-13
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = -1
Query: 332 PFSLHELKGVLSHVKDS-SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKS 156
P +L EL + ++K+S +PG+D I + L A +Y + + NS++ G P+ WK
Sbjct: 480 PITLKELNDEIKNLKNSKAPGKDLITNQLIKALPTKATLYLILIYNSILRIGYYPDAWKH 539
Query: 155 QEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRL 36
+V I KP K ND SYRPI+L S L+K+ E L+ RL
Sbjct: 540 AQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRL 579
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 74.5 bits (175), Expect = 1e-13
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = -1
Query: 332 PFSLHELKGVLSHVKDS-SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKS 156
P +L EL + ++K+S +PG+D I + L A +Y + + NS++ G P+ WK
Sbjct: 442 PITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKH 501
Query: 155 QEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRL 36
+V I KP K ND SYRPI+L S L+K+ E L+ RL
Sbjct: 502 AQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRL 541
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 74.5 bits (175), Expect = 1e-13
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = -1
Query: 332 PFSLHELKGVLSHVKDS-SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKS 156
P +L EL + ++K+S +PG+D I + L A +Y + + NS++ G P+ WK
Sbjct: 480 PITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKH 539
Query: 155 QEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRL 36
+V I KP K ND SYRPI+L S L+K+ E L+ RL
Sbjct: 540 AQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRL 579
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 69.7 bits (163), Expect = 4e-12
Identities = 65/229 (28%), Positives = 96/229 (41%), Gaps = 16/229 (6%)
Frame = -1
Query: 674 KRKVAERVYAEDMSNENLDILNEVICITRKFLRDKKQEGWKTFCTSLSPSTCPT-EVWRS 498
KR+V + YA I + + K L +KQ TF +L +WR
Sbjct: 111 KRRVRKE-YARTGDPRMQQIHSRLANCLHKALARRKQAQIDTFLDNLGADASTNYSLWRI 169
Query: 497 IKRFR------SAFKEXXXXXXXXXXL-----TNTFLDRLAPPSVA-ESIYFPLEXXXXX 354
KRF+ SA K N R P + A ES+ +E
Sbjct: 170 TKRFKAQPTPKSAIKNPSGGWCRTSLEKTEVFANNLEQRFTPYNYAPESLCRQVEEYLES 229
Query: 353 XXXXXXSP--FSLHELKGVLSHVK-DSSPGQDGIMYSFLSHLGNSALMYFLNLINSVMVT 183
P +L E+K +++ + +PG+D + + L + AL + + + NSV+
Sbjct: 230 PFQMSLPPSAVTLEEVKNLIAKLPLKKAPGEDLLDNRTIRLLPDQALQFLVLIFNSVLDV 289
Query: 182 GNIPETWKSQEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRL 36
G P+ WKS +I I K K DV SYRPI+L L K+ E L+ NRL
Sbjct: 290 GYFPKAWKSASIIMIHKTGKTPTDVDSYRPISLLPSLGKIMERLILNRL 338
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 66.5 bits (155), Expect = 3e-11
Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Frame = -1
Query: 332 PFSLHELKGVLSHVK-DSSPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKS 156
P +L EL G+++ ++ +PG D + + +L A +Y + + N+++ TG+ P WK
Sbjct: 483 PVTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKH 542
Query: 155 QEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRL 36
+ I KP K + SYRPI+L S L+K+ E ++ RL
Sbjct: 543 ASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILPKRL 582
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 66.1 bits (154), Expect = 4e-11
Identities = 31/104 (29%), Positives = 53/104 (50%)
Frame = -1
Query: 317 ELKGVLSHVKDSSPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEVIAI 138
EL L +K +PG + I Y + + ++ L N + +IP+ +K+ +I I
Sbjct: 437 ELSSALQTLKGCAPGLNRISYQMIKNSSHTTKNRITKLFNEIF-NSHIPQAYKTSLIIPI 495
Query: 137 KKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFI 6
KPN +SYRPI+L+ + K+ + ++ RL W + NN I
Sbjct: 496 LKPNTDKTKTSSYRPISLNCCIAKILDKIIAKRLWWLVTYNNLI 539
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/75 (22%), Positives = 41/75 (54%)
Frame = -1
Query: 710 PWWDRECMDAVSKRKVAERVYAEDMSNENLDILNEVICITRKFLRDKKQEGWKTFCTSLS 531
PWW++ ++++A + ++ +N+ I R L+ +K+E +F +++
Sbjct: 286 PWWNKHLDQLRKEKQLAWKKLNRTITVDNILDYRRKNAIFRYELKKRKKEASSSFTSTIH 345
Query: 530 PSTCPTEVWRSIKRF 486
P+T +++W +I+RF
Sbjct: 346 PTTPSSKIWANIRRF 360
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 66.1 bits (154), Expect = 4e-11
Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Frame = -1
Query: 332 PFSLHELKGVLSHVK-DSSPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKS 156
P +L EL G+++ ++ +PG D + + +L A +Y + + N+++ TG+ P WK
Sbjct: 36 PVTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKH 95
Query: 155 QEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRL 36
+ I KP K + SYRPI+L S L+K+ E ++ RL
Sbjct: 96 ASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRL 135
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 66.1 bits (154), Expect = 4e-11
Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Frame = -1
Query: 332 PFSLHELKGVLSHVK-DSSPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKS 156
P +L EL G+++ ++ +PG D + + +L A +Y + + N+++ TG+ P WK
Sbjct: 483 PVTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKH 542
Query: 155 QEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRL 36
+ I KP K + SYRPI+L S L+K+ E ++ RL
Sbjct: 543 ASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRL 582
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 66.1 bits (154), Expect = 4e-11
Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Frame = -1
Query: 332 PFSLHELKGVLSHVK-DSSPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKS 156
P +L EL G+++ ++ +PG D + + +L A +Y + + N+++ TG+ P WK
Sbjct: 483 PVTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKH 542
Query: 155 QEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRL 36
+ I KP K + SYRPI+L S L+K+ E ++ RL
Sbjct: 543 ASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRL 582
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 65.7 bits (153), Expect = 6e-11
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 2/225 (0%)
Frame = -1
Query: 680 VSKRKVAERVYAEDMSNENLDILNEVICITRKFLRDKKQEGWKTFCTSLSPSTCPTEVW- 504
++ R++ + E+ N + ++ + K+ + KT + P P+ W
Sbjct: 328 IATRRLTNALKQEE-KNSQRSYIEQLSPTSTKYPLWRAHRNLKTPIAPIMPLRSPSGTWF 386
Query: 503 RSIKRFRSAFKEXXXXXXXXXXLTNTFLDRLAPPSVAESIYFPLEXXXXXXXXXXXSPFS 324
RS + SAF + TNTF+ PP +A ++ P E P
Sbjct: 387 RSDEERASAFADHLQNVFRPNPSTNTFI---LPPLIAANLD-PQEPFEFR-------PCE 435
Query: 323 LHE-LKGVLSHVKDSSPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEV 147
L + +K L+ K SPG D I L L A+++ L N++ G P+ WK +
Sbjct: 436 LAKVIKEQLNPRK--SPGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTI 493
Query: 146 IAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRLEWFIENNN 12
+ I KP K +SYRPI+L + L+K+ E ++ R+ + NN
Sbjct: 494 VMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINN 538
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 65.7 bits (153), Expect = 6e-11
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Frame = -1
Query: 326 SLHELKGVLSHVK-DSSPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQE 150
+L E+K +++ + +PG+D + + L + AL + + NSV+ G P+ WKS
Sbjct: 439 TLEEVKNLIAKLPLKKAPGEDLLDNRTIRLLPDQALQFLALIFNSVLDVGYFPKAWKSAS 498
Query: 149 VIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRL 36
+I I K K DV SYRP +L L K+ E L+ NRL
Sbjct: 499 IIMIHKTGKTPTDVDSYRPTSLLPSLGKIMERLILNRL 536
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 64.1 bits (149), Expect = 2e-10
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Frame = -1
Query: 332 PFSLHEL-KGVLSHVKDSSPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKS 156
P + E+ + + S SPG D + + L L A++Y + N+++ P+ WK
Sbjct: 436 PIRVEEIVEAIKSLPLKKSPGIDNVCNATLKALPVRAILYLALIYNAILRVQFFPKQWKM 495
Query: 155 QEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRL 36
++ I KP KP SYRPI+L S L+K+ E L+ NRL
Sbjct: 496 AAILMIHKPGKPEESPESYRPISLLSSLSKLWERLIANRL 535
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 63.7 bits (148), Expect = 2e-10
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 2/225 (0%)
Frame = -1
Query: 680 VSKRKVAERVYAEDMSNENLDILNEVICITRKFLRDKKQEGWKTFCTSLSPSTCPTEVW- 504
++ R++ + E+ N + ++ + K+ + KT + P P+ W
Sbjct: 328 IATRRLTNALKQEE-KNSQRSYIEQLSPTSTKYPLWRAHRNLKTPIAPIMPLRSPSGTWF 386
Query: 503 RSIKRFRSAFKEXXXXXXXXXXLTNTFLDRLAPPSVAESIYFPLEXXXXXXXXXXXSPFS 324
RS + AF + TNTF+ PP +A ++ P E P
Sbjct: 387 RSDEERACAFADHLQNVFRPNPSTNTFI---LPPLIAANLD-PQEPFEFR-------PCE 435
Query: 323 LHE-LKGVLSHVKDSSPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEV 147
L + +K L+ K SPG D I L L A+++ L N++ G P+ WK +
Sbjct: 436 LAKVIKEQLNPRK--SPGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTI 493
Query: 146 IAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRLEWFIENNN 12
+ I KP K +SYRPI+L + L+K+ E ++ R+ + NN
Sbjct: 494 VMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINN 538
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 61.7 bits (143), Expect = 1e-09
Identities = 33/92 (35%), Positives = 48/92 (52%)
Frame = -1
Query: 281 SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEVIAIKKPNKPTNDVAS 102
SPG D I + L +SA+ Y L N++ G P+ WK ++I I KP K +S
Sbjct: 451 SPGYDLITPEMIIQLPHSAVRYITKLFNAITKLGYFPQRWKMMKIIMIPKPGKNHTVASS 510
Query: 101 YRPIALSSVLTKVAEHLVKNRLEWFIENNNFI 6
YRPI+L S ++K+ E + RL +N I
Sbjct: 511 YRPISLLSCISKLFEKCLLIRLNQHQTYHNII 542
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 58.4 bits (135), Expect = 9e-09
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Frame = -1
Query: 332 PFSLHELKGVLSHVKDS-SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKS 156
PF E+ V+ ++ +PG D I + L L A++Y + N+++ P WK
Sbjct: 435 PFEPCEVAEVIVRQSNNKAPGHDVICNATLKALPRQAILYITLVFNAIVRLQYFPYQWKL 494
Query: 155 QEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRLEWFIE 21
+ I KP KP + ASYRPI+L ++KV E L+ R+ +E
Sbjct: 495 GIISMIHKPGKPEREPASYRPISLLPSISKVFERLIAVRIVSIME 539
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 47.6 bits (108), Expect = 2e-05
Identities = 23/90 (25%), Positives = 43/90 (47%)
Frame = -1
Query: 287 DSSPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEVIAIKKPNKPTNDV 108
+ +PG DGI + + F + ++ G P+ WK +++ + K P N
Sbjct: 417 NKAPGIDGIPGVIVKAAATARPEVFRDTFQQCLLDGVFPKRWKKMKLVLLLKGKGPANVP 476
Query: 107 ASYRPIALSSVLTKVAEHLVKNRLEWFIEN 18
SYRP+ L ++ K+ E ++ R+E E+
Sbjct: 477 RSYRPLCLLDIVGKLFERILYARIELITES 506
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 44.0 bits (99), Expect = 2e-04
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = -1
Query: 281 SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEVIAIKK-PNKPTNDVA 105
SPG DGI + + + + +L + + G P WK V+++ K P+K + +
Sbjct: 451 SPGLDGINGTICKAVWRAIPEHLASLFSRCIRLGYFPAEWKCPRVVSLLKGPDKDKCEPS 510
Query: 104 SYRPIALSSVLTKVAEHLVKNRL 36
SYR I L V KV E ++ NR+
Sbjct: 511 SYRGICLLPVFGKVLEAIMVNRV 533
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 43.6 bits (98), Expect = 3e-04
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = -1
Query: 227 ALMYFLNLINSVMVTGNIPETWKSQEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLV 48
A+M L N++ G P+ WK +I I KP K SYRPI+L + L+K+ E +
Sbjct: 9 AVMRICLLFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQ-PSYRPISLLTCLSKLFEKGL 67
Query: 47 KNRLEWFIENNN 12
R+ ++ +N
Sbjct: 68 LLRISPHLKTHN 79
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 34.7 bits (76), Expect = 0.13
Identities = 23/83 (27%), Positives = 39/83 (46%)
Frame = -1
Query: 284 SSPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEVIAIKKPNKPTNDVA 105
SSPG DGI + + ++ +NLI + GN+P + + + I K
Sbjct: 358 SSPGPDGITPKSAREVPSGIMLRIMNLI---LWCGNLPHSIRLARTVFIPK-TVTAKRPQ 413
Query: 104 SYRPIALSSVLTKVAEHLVKNRL 36
+RPI++ SVL + ++ RL
Sbjct: 414 DFRPISVPSVLVRQLNAILATRL 436
>X04513-1|CAA28197.1| 430|Drosophila melanogaster protein (
Drosophila snake locusmRNA for serine protease. ).
Length = 430
Score = 29.1 bits (62), Expect = 6.2
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = -1
Query: 212 LNLINSVMVTGNIPETWKSQEVIAIKK--PNKPTNDVASYRPIA-LSSVLTKVAEHLVKN 42
L +IN IPE WK Q V AI + ++ T D SY + V T V+E L +
Sbjct: 31 LEIINYQTTKYTIPEVWKEQPVQAIGEDVDDQDTEDEESYLKFGDDAEVRTSVSEGLHEG 90
Query: 41 R 39
R
Sbjct: 91 R 91
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,551,168
Number of Sequences: 53049
Number of extensions: 506380
Number of successful extensions: 1459
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1457
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -