Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0164
         (498 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   1.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.0  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   3.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   3.5  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   3.5  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   4.7  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    21   6.2  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   6.2  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   6.2  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   8.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.1  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 127 VCLQFLLSGTYKTVCGCLL 71
           VCL F L+G + T C  L+
Sbjct: 419 VCLVFTLTGPFFTFCNVLM 437


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 166 SLVILLQFLKHQLTASDERQNLYEKLSPILTVLNKC 273
           SL+ +L F      +   R + Y+KLSP+  ++  C
Sbjct: 34  SLLWILLFTLGVTISGVYRTDFYKKLSPMRLIVQTC 69


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 497 AALPNPVYFTMRLTFSLQSTNKNSATKSLTL 405
           AALP+P+Y  MR  F  +   + + T+  TL
Sbjct: 226 AALPSPLYPWMRSQFE-RKRGRQTYTRYQTL 255


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +1

Query: 136 DHIYEGRDMTSLVILLQFLKHQLTASDERQNLYEKLSPILTVLNKCARV 282
           D +YE +  T L+ LLQ +K +    +E+    +    +   L K A+V
Sbjct: 570 DLMYEFQIFTFLMSLLQSIKRRYVLLNEKVEAIKTSPKMRHELQKLAQV 618



 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = +2

Query: 218 SDRTFTKNYLRY*RSSINVPVYASNVSSYVKPCCRISAT 334
           SD TF +   ++    +  P Y  N ++     C++ AT
Sbjct: 403 SDITFMRTVWKFFNIFLITPFYNFNENTIHSKLCKLYAT 441


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +1

Query: 217 ERQNLYEKLSPILTVLNKCARVRV 288
           E QNL+ K+  ++   N+C  +++
Sbjct: 211 EHQNLHNKICNLIDEFNECFGLQI 234


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 497 AALPNPVYFTMRLTFSLQSTNKNSATKSLTL 405
           AALP+P+Y  MR  F  +   + + T+  TL
Sbjct: 228 AALPSPLYPWMRSQFE-RKRGRQTYTRYQTL 257


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +2

Query: 308 KPCCRISATCRSPPSRATSCGTTCA 382
           +PC   SA CR    R    G  C+
Sbjct: 88  EPCIAGSAPCRKNTGRCAFDGICCS 112


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
 Frame = +1

Query: 385 LLTTPVTSVRDLVAEFLFVLCKEK---VSRMVKYTGFG 489
           L+T P   +R    E LF   KEK   +   V ++ FG
Sbjct: 136 LVTRPSYRLRKFFDELLFKCMKEKWIPLCNSVTFSNFG 173


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
 Frame = +1

Query: 385 LLTTPVTSVRDLVAEFLFVLCKEK---VSRMVKYTGFG 489
           L+T P   +R    E LF   KEK   +   V ++ FG
Sbjct: 369 LVTRPSYRLRKFFDELLFKCMKEKWIPLCNSVTFSNFG 406


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
 Frame = +1

Query: 385 LLTTPVTSVRDLVAEFLFVLCKEK---VSRMVKYTGFG 489
           L+T P   +R    E LF   KEK   +   V ++ FG
Sbjct: 369 LVTRPSYRLRKFFDELLFKCMKEKWIPLCNSVTFSNFG 406


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 162 HISTFINMVRLLFVSNFFCQGHIKQC 85
           HI++ +N +    +S+ F  G  K C
Sbjct: 343 HINSAVNPILYNIISSKFRSGFFKLC 368


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +2

Query: 332 TCRSPPSRATSCGTTCAG 385
           TC  P  R   C  TC G
Sbjct: 93  TCDEPVHRPGRCCKTCPG 110


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +2

Query: 266 INVPVYASNVSSYVKPCCRISATCRSPPSRATSCGTTCAGC*RRPSPASGTW 421
           IN+ +YA N++SY  P   IS T R   +R  S  +       + +P  G W
Sbjct: 387 INI-LYA-NMNSYSVPEPTISTTPRPEWARPPSTPSADGSKPVQTTPKPGQW 436


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,078
Number of Sequences: 336
Number of extensions: 2093
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)