Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0164
         (498 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   2.5  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   2.5  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   2.5  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    23   5.8  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 72  NKHPHTVLYVPD 107
           NKHPH ++Y+ D
Sbjct: 110 NKHPHPIIYLRD 121


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 72  NKHPHTVLYVPD 107
           NKHPH ++Y+ D
Sbjct: 110 NKHPHPIIYLRD 121


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 72  NKHPHTVLYVPD 107
           NKHPH ++Y+ D
Sbjct: 62  NKHPHPIIYLRD 73


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 341 SPPSRATSCGTTCA 382
           SPP R   CG +CA
Sbjct: 563 SPPGRGWVCGISCA 576


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 503,921
Number of Sequences: 2352
Number of extensions: 8703
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)