Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0164
(498 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT004873-1|AAO45229.1| 573|Drosophila melanogaster LD22866p pro... 142 3e-34
AE014298-1318|AAF46477.2| 573|Drosophila melanogaster CG15797-P... 142 3e-34
BT024978-1|ABE01208.1| 563|Drosophila melanogaster IP14842p pro... 32 0.37
AF209068-1|AAF89163.2| 1871|Drosophila melanogaster Mud protein ... 32 0.37
AE014298-2023|AAN09584.1| 1871|Drosophila melanogaster CG12047-P... 32 0.37
AE014298-2022|AAF48362.2| 2328|Drosophila melanogaster CG12047-P... 32 0.37
AE014298-2021|AAN09583.2| 2520|Drosophila melanogaster CG12047-P... 32 0.37
AF174134-3|AAF88146.1| 2501|Drosophila melanogaster Mud protein ... 29 2.6
AY160083-1|AAN77520.1| 1910|Drosophila melanogaster alpha1U prot... 28 8.1
AY119594-1|AAM50248.1| 472|Drosophila melanogaster LD17927p pro... 28 8.1
AE014298-2027|AAN09585.1| 2148|Drosophila melanogaster CG1517-PC... 28 8.1
AE014298-2026|AAF48365.2| 2196|Drosophila melanogaster CG1517-PB... 28 8.1
AE014298-1409|AAF46553.2| 472|Drosophila melanogaster CG2972-PA... 28 8.1
>BT004873-1|AAO45229.1| 573|Drosophila melanogaster LD22866p
protein.
Length = 573
Score = 142 bits (343), Expect = 3e-34
Identities = 69/119 (57%), Positives = 87/119 (73%), Gaps = 1/119 (0%)
Frame = +1
Query: 145 YEGRDMTSLVILLQFLKHQLTASDERQNLYEKLSPILTVLNKCARV-RVQRKFLRKAVLP 321
+E R++ SL +LL++L+ L + + +E LSP+LTVL KCAR RV R +LR+ +LP
Sbjct: 339 FEKRNVRSLDVLLRYLRQSLAQQEAEASSHELLSPVLTVLVKCARSDRVMRHYLRQEILP 398
Query: 322 HLRDVSKPPEQGDELRNHLCRLLTTPVTSVRDLVAEFLFVLCKEKVSRMVKYTGFGNAA 498
LRDVS+ PE G ELRNHLCR LT P +RDL AE LFVLCKE V RM+KYTG+GNAA
Sbjct: 399 PLRDVSQRPEVGQELRNHLCRFLTLPAMILRDLSAELLFVLCKENVGRMIKYTGYGNAA 457
>AE014298-1318|AAF46477.2| 573|Drosophila melanogaster CG15797-PA
protein.
Length = 573
Score = 142 bits (343), Expect = 3e-34
Identities = 69/119 (57%), Positives = 87/119 (73%), Gaps = 1/119 (0%)
Frame = +1
Query: 145 YEGRDMTSLVILLQFLKHQLTASDERQNLYEKLSPILTVLNKCARV-RVQRKFLRKAVLP 321
+E R++ SL +LL++L+ L + + +E LSP+LTVL KCAR RV R +LR+ +LP
Sbjct: 339 FEKRNVRSLDVLLRYLRQSLAQQEAEASSHELLSPVLTVLVKCARSDRVMRHYLRQEILP 398
Query: 322 HLRDVSKPPEQGDELRNHLCRLLTTPVTSVRDLVAEFLFVLCKEKVSRMVKYTGFGNAA 498
LRDVS+ PE G ELRNHLCR LT P +RDL AE LFVLCKE V RM+KYTG+GNAA
Sbjct: 399 PLRDVSQRPEVGQELRNHLCRFLTLPAMILRDLSAELLFVLCKENVGRMIKYTGYGNAA 457
>BT024978-1|ABE01208.1| 563|Drosophila melanogaster IP14842p
protein.
Length = 563
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +2
Query: 221 DRTFTKNYLRY*RSSINVPVYASNVSSYVKPCCRISATCRSPPSRATSCGTTCAGC*RRP 400
DR T+ YL +++ V VY VS+ V PC S+ P S C +T + +P
Sbjct: 136 DRLLTREYLSQAIANVAV-VYRQGVSTSVSPCLPSSSLSPDPRSDDAPCPSTPSSSSSQP 194
Query: 401 SPAS 412
S ++
Sbjct: 195 SSST 198
>AF209068-1|AAF89163.2| 1871|Drosophila melanogaster Mud protein
protein.
Length = 1871
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +2
Query: 221 DRTFTKNYLRY*RSSINVPVYASNVSSYVKPCCRISATCRSPPSRATSCGTTCAGC*RRP 400
DR T+ YL +++ V VY VS+ V PC S+ P S C +T + +P
Sbjct: 136 DRLLTREYLSQAIANVAV-VYRQGVSTSVSPCLPSSSLSPDPRSDDAPCPSTPSSSSSQP 194
Query: 401 SPAS 412
S ++
Sbjct: 195 SSST 198
>AE014298-2023|AAN09584.1| 1871|Drosophila melanogaster CG12047-PC,
isoform C protein.
Length = 1871
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +2
Query: 221 DRTFTKNYLRY*RSSINVPVYASNVSSYVKPCCRISATCRSPPSRATSCGTTCAGC*RRP 400
DR T+ YL +++ V VY VS+ V PC S+ P S C +T + +P
Sbjct: 136 DRLLTREYLSQAIANVAV-VYRQGVSTSVSPCLPSSSLSPDPRSDDAPCPSTPSSSSSQP 194
Query: 401 SPAS 412
S ++
Sbjct: 195 SSST 198
>AE014298-2022|AAF48362.2| 2328|Drosophila melanogaster CG12047-PA,
isoform A protein.
Length = 2328
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +2
Query: 221 DRTFTKNYLRY*RSSINVPVYASNVSSYVKPCCRISATCRSPPSRATSCGTTCAGC*RRP 400
DR T+ YL +++ V VY VS+ V PC S+ P S C +T + +P
Sbjct: 136 DRLLTREYLSQAIANVAV-VYRQGVSTSVSPCLPSSSLSPDPRSDDAPCPSTPSSSSSQP 194
Query: 401 SPAS 412
S ++
Sbjct: 195 SSST 198
>AE014298-2021|AAN09583.2| 2520|Drosophila melanogaster CG12047-PB,
isoform B protein.
Length = 2520
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +2
Query: 221 DRTFTKNYLRY*RSSINVPVYASNVSSYVKPCCRISATCRSPPSRATSCGTTCAGC*RRP 400
DR T+ YL +++ V VY VS+ V PC S+ P S C +T + +P
Sbjct: 136 DRLLTREYLSQAIANVAV-VYRQGVSTSVSPCLPSSSLSPDPRSDDAPCPSTPSSSSSQP 194
Query: 401 SPAS 412
S ++
Sbjct: 195 SSST 198
>AF174134-3|AAF88146.1| 2501|Drosophila melanogaster Mud protein
protein.
Length = 2501
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 221 DRTFTKNYLRY*RSSINVPVYASNVSSYVKPCCRISATCRSPPSRA--TSCGTTCAGC*R 394
DR T+ YL +++ V VY VS+ V PC + ++ SP SR+ C +T +
Sbjct: 136 DRLLTREYLSQAIANVAV-VYRQGVSTSVSPC--LPSSSLSPDSRSDDAPCPSTPSSSSS 192
Query: 395 RPSPAS 412
+PS ++
Sbjct: 193 QPSSST 198
>AY160083-1|AAN77520.1| 1910|Drosophila melanogaster alpha1U protein
protein.
Length = 1910
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 178 LLQFLKHQLTASDERQNLYEKLSPILTVLNKCARVRVQRKFLRKAVLPHL 327
L++ K ++ E ++ K P+ ++NK A+VR LRK + H+
Sbjct: 677 LVENCKRPMSECWESNVVFRKQKPV-RIMNKTAKVRAAGSSLRKLAITHI 725
>AY119594-1|AAM50248.1| 472|Drosophila melanogaster LD17927p
protein.
Length = 472
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 181 LQFLKHQLTASDERQNLYEKLSPILTVLNKCARVRVQRKFLRKAVLPHLRDVSKP-PE 351
++FL TA L E +LTV + A VR +R+ R VLP V +P PE
Sbjct: 8 IKFLVADTTAFINAVPLNEYAEQVLTVPDVVAEVRNKRQIRRLCVLPFDLQVREPRPE 65
>AE014298-2027|AAN09585.1| 2148|Drosophila melanogaster CG1517-PC,
isoform C protein.
Length = 2148
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 178 LLQFLKHQLTASDERQNLYEKLSPILTVLNKCARVRVQRKFLRKAVLPHL 327
L++ K ++ E ++ K P+ ++NK A+VR LRK + H+
Sbjct: 915 LVENCKRPMSECWESNVVFRKQKPV-RIMNKTAKVRAAGSSLRKLAITHI 963
>AE014298-2026|AAF48365.2| 2196|Drosophila melanogaster CG1517-PB,
isoform B protein.
Length = 2196
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 178 LLQFLKHQLTASDERQNLYEKLSPILTVLNKCARVRVQRKFLRKAVLPHL 327
L++ K ++ E ++ K P+ ++NK A+VR LRK + H+
Sbjct: 963 LVENCKRPMSECWESNVVFRKQKPV-RIMNKTAKVRAAGSSLRKLAITHI 1011
>AE014298-1409|AAF46553.2| 472|Drosophila melanogaster CG2972-PA
protein.
Length = 472
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 181 LQFLKHQLTASDERQNLYEKLSPILTVLNKCARVRVQRKFLRKAVLPHLRDVSKP-PE 351
++FL TA L E +LTV + A VR +R+ R VLP V +P PE
Sbjct: 8 IKFLVADTTAFINAVPLNEYAEQVLTVPDVVAEVRNKRQIRRLCVLPFDLQVREPRPE 65
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,773,359
Number of Sequences: 53049
Number of extensions: 405597
Number of successful extensions: 1420
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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