Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0160
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.   234   2e-63
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   1.2  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   2.1  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   4.9  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   8.5  
AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.    23   8.5  

>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score =  234 bits (572), Expect = 2e-63
 Identities = 108/176 (61%), Positives = 121/176 (68%)
 Frame = +3

Query: 3   TYEVLIDNEKVESGDL*ADWDFLPPKKIKDPEAKKPEDWXXXXXXXXXXXXXXXXXXXXX 182
           TYEVLIDNEKVESG L  DWDFLPPKKIKDPEAKKPEDW                     
Sbjct: 178 TYEVLIDNEKVESGSLEDDWDFLPPKKIKDPEAKKPEDWDDRATIADPDDTKPEDWDKPE 237

Query: 183 HIPDPDATKXXXXXXXXXXXXXXXXIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYT 362
           HIPDPDATK                IDNP+YKG W PKQIDNPAYKG WVHPEIDNPEY 
Sbjct: 238 HIPDPDATKPDDWDDEMDGEWEPPMIDNPEYKGEWKPKQIDNPAYKGVWVHPEIDNPEYE 297

Query: 363 PDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAKERGEVIKKRQEGEKKM 530
            D +LY R+E+CAVG+D+WQVKSGTIFD+F+IT+D   AK+    +K+ QEGEKK+
Sbjct: 298 EDKSLYLREEVCAVGIDVWQVKSGTIFDNFMITNDLEEAKKVAASVKETQEGEKKV 353


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 19/66 (28%), Positives = 28/66 (42%)
 Frame = +1

Query: 37  NLATYRQTGTSFRLRKSRTLKPRNQKTGMTSPLFQTPKTRSLRIGTSLNTFQIQMPPNLK 216
           N A   Q    F +R SRTL  +  +T + SPL        L +G+  +T + +    L 
Sbjct: 84  NDAKISQLVVDFMMRISRTLPQQQSRTELFSPLSIITVANLLFLGSGGSTHE-EFGKVLT 142

Query: 217 TGMMRW 234
              M W
Sbjct: 143 PSSMNW 148


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 396 RFRRACTGLNQECTLGCRFRDGPMGLCKL 310
           R RR C  L  E  L  R    P+ +C+L
Sbjct: 404 RIRRGCNTLPNEMVLDSRTASTPVEICEL 432


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 421 CHKSRPTAQISSRLYRFESGVYSGLSISG 335
           C K   T +I  +L +FES   S L++ G
Sbjct: 491 CAKQSETTRIEKQLEQFESAPRSKLAVYG 519


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 327 WVHPEI-DNPEYTPDSNLYKRDEICAVGLDLWQV 425
           ++ PE+ D        + +KR ++ A+GL LW++
Sbjct: 232 YMAPEVLDETINVSQFDSFKRADVYALGLVLWEI 265


>AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +1

Query: 172 TSLNTFQIQMPPNLKTGMMRWTENGSHL*LTTQTTRA-FGHQNRLITQLTKAHGSIPKST 348
           TS +T  +Q    +   M   T+N  +    +   RA +G QN+L   L +  G++PKS 
Sbjct: 23  TSASTNHVQQLMKVFRSM---TQNFDYTKKPSYLQRAKYGVQNQLRNPLVQKAGNLPKSA 79

Query: 349 TQS 357
             S
Sbjct: 80  KLS 82


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,271
Number of Sequences: 2352
Number of extensions: 12196
Number of successful extensions: 46
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)