Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0159
         (707 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding pr...    24   5.4  
AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding pr...    24   5.4  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   9.4  

>AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding
           protein AgamOBP56 protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 516 TSSAGI*FHKQQSLACHKEGVNSSSRCPGIED 421
           TS+ G    +Q +LAC K+   ++ RC  I +
Sbjct: 132 TSNFGYCMWRQMALACPKDKQVANKRCDRIRE 163


>AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding
           protein OBPjj7a protein.
          Length = 235

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 516 TSSAGI*FHKQQSLACHKEGVNSSSRCPGIED 421
           TS+ G    +Q +LAC K+   ++ RC  I +
Sbjct: 186 TSNFGYCMWRQMALACPKDKQVANKRCDRIRE 217


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 431  PGHLEELLTPSLWHARL 481
            PG  E  L+P+LWH  +
Sbjct: 1008 PGLNESSLSPNLWHGSI 1024


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,988
Number of Sequences: 2352
Number of extensions: 14803
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)