Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0159
         (707 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014631-1|AAT27255.1|  890|Drosophila melanogaster SD09860p pro...    29   8.2  
AE014298-2844|AAF48957.1|  890|Drosophila melanogaster CG12202-P...    29   8.2  

>BT014631-1|AAT27255.1|  890|Drosophila melanogaster SD09860p
           protein.
          Length = 890

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = +3

Query: 480 SAVCEI-IYLRYSWELYRSQTTITNMICTLLMPSLMKYLEHQRQKTKNQGKVD 635
           +A C I +Y+R   +  +S+TTI  +    L PS +K L  +++K K + +++
Sbjct: 560 AAKCAIEVYIRLYDKPLKSETTIEEIDIENLPPSELKKLRSKQRKAKKKAELE 612


>AE014298-2844|AAF48957.1|  890|Drosophila melanogaster CG12202-PA
           protein.
          Length = 890

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = +3

Query: 480 SAVCEI-IYLRYSWELYRSQTTITNMICTLLMPSLMKYLEHQRQKTKNQGKVD 635
           +A C I +Y+R   +  +S+TTI  +    L PS +K L  +++K K + +++
Sbjct: 560 AAKCAIEVYIRLYDKPLKSETTIEEIDIENLPPSELKKLRSKQRKAKKKAELE 612


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,303,425
Number of Sequences: 53049
Number of extensions: 612063
Number of successful extensions: 1418
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)